RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 CACFD1Q9UGQ2 172 aa-1.94□□□□□ -2.72
CASC4-210ENST00000559550 SPHKAPQ2M3C7 1700 aa-1.94□□□□□ -2.72
CASC4-210ENST00000559550 UNC80Q8N2C7 3258 aa-1.95□□□□□ -2.72
CASC4-210ENST00000559550 RGPD3A6NKT7 1758 aaPredicted RBP-1.95□□□□□ -2.72
CASC4-210ENST00000559550 RGPD4Q7Z3J3 1758 aa-1.95□□□□□ -2.72
CASC4-210ENST00000559550 A0A1B0GV90 55 aa-1.95□□□□□ -2.72
CASC4-210ENST00000559550 DLEU1O43261 78 aa-1.95□□□□□ -2.72
CASC4-210ENST00000559550 PSMG4Q5JS54 123 aa-1.95□□□□□ -2.72
CASC4-210ENST00000559550 UBE2D4Q9Y2X8 147 aa-1.95□□□□□ -2.72
CASC4-210ENST00000559550 SMARCA2P51531 1590 aa-1.95□□□□□ -2.72
CASC4-210ENST00000559550 CHD1O14646 1710 aa-1.95□□□□□ -2.72
CASC4-210ENST00000559550 PZPP20742 1482 aa-1.95□□□□□ -2.72
CASC4-210ENST00000559550 PKD1L3Q7Z443 1732 aa-1.96□□□□□ -2.72
CASC4-210ENST00000559550 SHPRHQ149N8 1683 aa-1.96□□□□□ -2.72
CASC4-210ENST00000559550 ABCC5O15440 1437 aa-1.97□□□□□ -2.72
CASC4-210ENST00000559550 TRBV25-1A0A075B6N4 114 aa-1.97□□□□□ -2.72
CASC4-210ENST00000559550 MMP24-AS1A0A0U1RRL7 71 aa-1.97□□□□□ -2.72
CASC4-210ENST00000559550 LINC01546A6NGU7 62 aa-1.97□□□□□ -2.72
CASC4-210ENST00000559550 NDUFA3O95167 84 aa-1.97□□□□□ -2.72
CASC4-210ENST00000559550 S100A1P23297 94 aa-1.97□□□□□ -2.72
CASC4-210ENST00000559550 ABCC10Q5T3U5 1492 aa-1.97□□□□□ -2.72
CASC4-210ENST00000559550 ASXL1Q8IXJ9 1541 aa-1.97□□□□□ -2.73
CASC4-210ENST00000559550 LY75O60449 1722 aa-1.97□□□□□ -2.73
CASC4-210ENST00000559550 CEP170BQ9Y4F5 1589 aaPredicted RBP-1.98□□□□□ -2.73
CASC4-210ENST00000559550 TOPAZ1Q8N9V7 1692 aa-1.98□□□□□ -2.73
CASC4-210ENST00000559550 PMCHL1Q16048 86 aa-1.98□□□□□ -2.73
CASC4-210ENST00000559550 TNRC6CQ9HCJ0 1690 aaKnown RBP-1.99□□□□□ -2.73
CASC4-210ENST00000559550 TOGARAM1Q9Y4F4 1720 aa-2□□□□□ -2.73
CASC4-210ENST00000559550 ATP7BP35670 1465 aa-2.01□□□□□ -2.73
CASC4-210ENST00000559550 SAMD9Q5K651 1589 aa-2.01□□□□□ -2.73
CASC4-210ENST00000559550 MAST1Q9Y2H9 1570 aa-2.01□□□□□ -2.73
CASC4-210ENST00000559550 USP32Q8NFA0 1604 aa-2.01□□□□□ -2.73
CASC4-210ENST00000559550 IGLV5-48A0A075B6I7 105 aa-2.01□□□□□ -2.73
CASC4-210ENST00000559550 PARP4Q9UKK3 1724 aaKnown RBP-2.01□□□□□ -2.73
CASC4-210ENST00000559550 ASPMQ8IZT6 3477 aa-2.01□□□□□ -2.73
CASC4-210ENST00000559550 DNAH12Q6ZR08 3092 aa-2.02□□□□□ -2.73
CASC4-210ENST00000559550 MON2Q7Z3U7 1717 aa-2.02□□□□□ -2.73
CASC4-210ENST00000559550 DEFB136Q30KP8 78 aa-2.02□□□□□ -2.73
CASC4-210ENST00000559550 MLH3Q9UHC1 1453 aa-2.02□□□□□ -2.73
CASC4-210ENST00000559550 A0A1B0GUL6 1792 aa-2.03□□□□□ -2.73
CASC4-210ENST00000559550 PLXNC1O60486 1568 aa-2.03□□□□□ -2.73
CASC4-210ENST00000559550 CRYBG1Q9Y4K1 1723 aa-2.03□□□□□ -2.73
CASC4-210ENST00000559550 NDUFC1O43677 76 aa-2.04□□□□□ -2.74
CASC4-210ENST00000559550 KIF20BQ96Q89 1820 aa-2.04□□□□□ -2.74
CASC4-210ENST00000559550 TRGV9Q99603 122 aa-2.04□□□□□ -2.74
CASC4-210ENST00000559550 CENPFP49454 3210 aa-2.04□□□□□ -2.74
CASC4-210ENST00000559550 C5P01031 1676 aa-2.05□□□□□ -2.74
CASC4-210ENST00000559550 PREX1Q8TCU6 1659 aa-2.05□□□□□ -2.74
CASC4-210ENST00000559550 LCE6AA0A183 80 aa-2.05□□□□□ -2.74
CASC4-210ENST00000559550 M0QZ58 72 aa-2.05□□□□□ -2.74
CASC4-210ENST00000559550 GNGT2O14610 69 aa-2.05□□□□□ -2.74
CASC4-210ENST00000559550 MT-ATP8P03928 68 aa-2.05□□□□□ -2.74
CASC4-210ENST00000559550 DEFB130BP0DP73 79 aa-2.05□□□□□ -2.74
CASC4-210ENST00000559550 DEFB130AP0DP74 79 aa-2.05□□□□□ -2.74
CASC4-210ENST00000559550 PSENENQ9NZ42 101 aa-2.05□□□□□ -2.74
CASC4-210ENST00000559550 GNG8Q9UK08 70 aa-2.05□□□□□ -2.74
CASC4-210ENST00000559550 POLR1AO95602 1720 aaPredicted RBP-2.05□□□□□ -2.74
CASC4-210ENST00000559550 PLCH1Q4KWH8 1693 aa-2.06□□□□□ -2.74
CASC4-210ENST00000559550 UQCRHP07919 91 aa-2.06□□□□□ -2.74
CASC4-210ENST00000559550 IGLC2P0DOY2 106 aa-2.06□□□□□ -2.74
CASC4-210ENST00000559550 IGLC3P0DOY3 106 aa-2.06□□□□□ -2.74
CASC4-210ENST00000559550 GTF2H5Q6ZYL4 71 aa-2.06□□□□□ -2.74
CASC4-210ENST00000559550 ABCA3Q99758 1704 aa-2.07□□□□□ -2.74
CASC4-210ENST00000559550 EFCAB10A6NFE3 127 aa-2.07□□□□□ -2.74
CASC4-210ENST00000559550 AP4S1Q9Y587 144 aa-2.07□□□□□ -2.74
CASC4-210ENST00000559550 EIF4G3O43432 1585 aaKnown RBP-2.07□□□□□ -2.74
CASC4-210ENST00000559550 NRXN1Q9ULB1 1477 aa-2.07□□□□□ -2.74
CASC4-210ENST00000559550 SPART-AS1P0CW21 52 aa-2.08□□□□□ -2.74
CASC4-210ENST00000559550 LEAP2Q969E1 77 aa-2.08□□□□□ -2.74
CASC4-210ENST00000559550 UBR3Q6ZT12 1888 aa-2.08□□□□□ -2.74
CASC4-210ENST00000559550 UBR1Q8IWV7 1749 aa-2.08□□□□□ -2.74
CASC4-210ENST00000559550 LINC00158P58513 81 aa-2.09□□□□□ -2.74
CASC4-210ENST00000559550 SUPT6HQ7KZ85 1726 aaKnown RBP-2.09□□□□□ -2.74
CASC4-210ENST00000559550 TEX14Q8IWB6 1497 aa-2.09□□□□□ -2.74
CASC4-210ENST00000559550 PIK3C2BO00750 1634 aa-2.09□□□□□ -2.74
CASC4-210ENST00000559550 BRCA2P51587 3418 aa-2.1□□□□□ -2.75
CASC4-210ENST00000559550 MPC2O95563 127 aa-2.1□□□□□ -2.75
CASC4-210ENST00000559550 KRTAP19-2Q3LHN2 52 aa-2.1□□□□□ -2.75
CASC4-210ENST00000559550 NMSQ5H8A3 153 aa-2.1□□□□□ -2.75
CASC4-210ENST00000559550 TMEM203Q969S6 136 aa-2.1□□□□□ -2.75
CASC4-210ENST00000559550 C2orf88Q9BSF0 95 aa-2.1□□□□□ -2.75
CASC4-210ENST00000559550 RAPGEF2Q9Y4G8 1499 aa-2.1□□□□□ -2.75
CASC4-210ENST00000559550 KIF21BO75037 1637 aa-2.1□□□□□ -2.75
CASC4-210ENST00000559550 QSER1Q2KHR3 1735 aa-2.11□□□□□ -2.75
CASC4-210ENST00000559550 CDH23Q9H251 3354 aa-2.11□□□□□ -2.75
CASC4-210ENST00000559550 TMEM218A2RU14 115 aa-2.11□□□□□ -2.75
CASC4-210ENST00000559550 F8WEM9 126 aa-2.11□□□□□ -2.75
CASC4-210ENST00000559550 IAPPP10997 89 aa-2.11□□□□□ -2.75
CASC4-210ENST00000559550 DNMBPQ6XZF7 1577 aa-2.11□□□□□ -2.75
CASC4-210ENST00000559550 ABCC2Q92887 1545 aa-2.12□□□□□ -2.75
CASC4-210ENST00000559550 WIZO95785 1651 aa-2.12□□□□□ -2.75
CASC4-210ENST00000559550 MRPS10P82664 201 aaKnown RBP-2.12□□□□□ -2.75
CASC4-210ENST00000559550 COX6B2Q6YFQ2 88 aa-2.12□□□□□ -2.75
CASC4-210ENST00000559550 TIMM8BQ9Y5J9 83 aaPredicted RBP-2.12□□□□□ -2.75
CASC4-210ENST00000559550 ERVK-7P63135 1459 aa-2.13□□□□□ -2.75
CASC4-210ENST00000559550 COX7BP24311 80 aa-2.13□□□□□ -2.75
CASC4-210ENST00000559550 RGPD8O14715 1765 aaPredicted RBP-2.13□□□□□ -2.75
CASC4-210ENST00000559550 RGPD5Q99666 1765 aa-2.13□□□□□ -2.75
CASC4-210ENST00000559550 CROCC2H7BZ55 1655 aa-2.14□□□□□ -2.75
CASC4-210ENST00000559550 ITSN2Q9NZM3 1697 aa-2.14□□□□□ -2.75
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms