RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 GAGE2AQ6NT46 116 aa8.71□□□□□ -1.02
SNRPA1-207ENST00000559309 TRACP01848 142 aa8.7□□□□□ -1.02
SNRPA1-207ENST00000559309 COL5A1-AS1Q5SY13 56 aa8.7□□□□□ -1.02
SNRPA1-207ENST00000559309 PPDPFLQ8WWR9 84 aa8.7□□□□□ -1.02
SNRPA1-207ENST00000559309 NAA38Q9BRA0 125 aaKnown RBP8.7□□□□□ -1.02
SNRPA1-207ENST00000559309 OCIAD2Q56VL3 154 aa8.69□□□□□ -1.02
SNRPA1-207ENST00000559309 H3BUT2 72 aa8.68□□□□□ -1.02
SNRPA1-207ENST00000559309 C3orf22Q8N5N4 141 aa8.68□□□□□ -1.02
SNRPA1-207ENST00000559309 A0A1W2PPM0 123 aa8.67□□□□□ -1.02
SNRPA1-207ENST00000559309 TCL1BO95988 128 aa8.67□□□□□ -1.02
SNRPA1-207ENST00000559309 SNCGO76070 127 aa8.65□□□□□ -1.02
SNRPA1-207ENST00000559309 SCGB1C2P0DMR2 95 aa8.65□□□□□ -1.02
SNRPA1-207ENST00000559309 IGLV8-61A0A075B6I0 122 aa8.64□□□□□ -1.03
SNRPA1-207ENST00000559309 TRBV20-1A0A075B6N2 111 aa8.64□□□□□ -1.03
SNRPA1-207ENST00000559309 LYRM7Q5U5X0 104 aa8.63□□□□□ -1.03
SNRPA1-207ENST00000559309 SSBP3-AS1Q7Z2R9 100 aa8.63□□□□□ -1.03
SNRPA1-207ENST00000559309 DEFB105AQ8NG35 78 aa8.63□□□□□ -1.03
SNRPA1-207ENST00000559309 ATXN8Q156A1 80 aa8.62□□□□□ -1.03
SNRPA1-207ENST00000559309 TYMSOSQ8TAI1 123 aa8.62□□□□□ -1.03
SNRPA1-207ENST00000559309 LAMTOR3Q9UHA4 124 aa8.62□□□□□ -1.03
SNRPA1-207ENST00000559309 LOC100996750A0A140TA64 210 aa8.61□□□□□ -1.03
SNRPA1-207ENST00000559309 H3BQ85 93 aa8.61□□□□□ -1.03
SNRPA1-207ENST00000559309 KRTAP4-6Q9BYQ5 205 aa8.61□□□□□ -1.03
SNRPA1-207ENST00000559309 GHRHP01286 108 aa8.6□□□□□ -1.03
SNRPA1-207ENST00000559309 Q8NBF4 154 aa8.6□□□□□ -1.03
SNRPA1-207ENST00000559309 ORMDL1Q9P0S3 153 aa8.6□□□□□ -1.03
SNRPA1-207ENST00000559309 DNAL4O96015 105 aa8.59□□□□□ -1.03
SNRPA1-207ENST00000559309 FABP2P12104 132 aa8.59□□□□□ -1.03
SNRPA1-207ENST00000559309 MOBPQ13875 183 aa8.59□□□□□ -1.03
SNRPA1-207ENST00000559309 IGLV9-49A0A0B4J1Y8 123 aa8.58□□□□□ -1.04
SNRPA1-207ENST00000559309 TMEM256-PLSCR3K7ERE1 68 aa8.57□□□□□ -1.04
SNRPA1-207ENST00000559309 UBE2V1Q13404 147 aa8.57□□□□□ -1.04
SNRPA1-207ENST00000559309 NDUFV3P56181 108 aaKnown RBP8.56□□□□□ -1.04
SNRPA1-207ENST00000559309 LCE2AQ5TA79 106 aaPredicted RBP8.56□□□□□ -1.04
SNRPA1-207ENST00000559309 LINC00304Q8N9R0 145 aa8.55□□□□□ -1.04
SNRPA1-207ENST00000559309 SPCS1Q9Y6A9 102 aa8.54□□□□□ -1.04
SNRPA1-207ENST00000559309 H3BMG7 143 aa8.53□□□□□ -1.04
SNRPA1-207ENST00000559309 BAALC-AS2P0C853 105 aa8.53□□□□□ -1.04
SNRPA1-207ENST00000559309 RPS29P62273 56 aaKnown RBP8.53□□□□□ -1.04
SNRPA1-207ENST00000559309 CD164Q04900 197 aa8.53□□□□□ -1.04
SNRPA1-207ENST00000559309 C9orf153Q5TBE3 101 aa8.53□□□□□ -1.04
SNRPA1-207ENST00000559309 SPAG11AQ6PDA7 123 aa8.53□□□□□ -1.04
SNRPA1-207ENST00000559309 K7EP34 96 aa8.52□□□□□ -1.05
SNRPA1-207ENST00000559309 Q6JHZ5 121 aa8.52□□□□□ -1.05
SNRPA1-207ENST00000559309 LRP2P98164 4655 aa8.51□□□□□ -1.05
SNRPA1-207ENST00000559309 IGFL1Q6UW32 110 aa8.51□□□□□ -1.05
SNRPA1-207ENST00000559309 C9JAW5 83 aa8.5□□□□□ -1.05
SNRPA1-207ENST00000559309 F8WEM9 126 aa8.5□□□□□ -1.05
SNRPA1-207ENST00000559309 H3BT86 120 aa8.5□□□□□ -1.05
SNRPA1-207ENST00000559309 SPINK1P00995 79 aa8.5□□□□□ -1.05
SNRPA1-207ENST00000559309 PRO0461Q9UI25 63 aa8.5□□□□□ -1.05
SNRPA1-207ENST00000559309 Q6Q795 121 aa8.49□□□□□ -1.05
SNRPA1-207ENST00000559309 OBSCN-AS1Q96MR7 158 aa8.49□□□□□ -1.05
SNRPA1-207ENST00000559309 A0A0G2JQZ4 141 aa8.48□□□□□ -1.05
SNRPA1-207ENST00000559309 SMCPP49901 116 aaPredicted RBP8.48□□□□□ -1.05
SNRPA1-207ENST00000559309 Q5XG85 94 aa8.48□□□□□ -1.05
SNRPA1-207ENST00000559309 ANKRD29Q8N6D5 301 aa8.48□□□□□ -1.05
SNRPA1-207ENST00000559309 TRBV7-4A0A0J9YYF1 115 aa8.47□□□□□ -1.05
SNRPA1-207ENST00000559309 RNF213Q63HN8 5207 aa8.47□□□□□ -1.05
SNRPA1-207ENST00000559309 A0A1W2PNM2 257 aa8.43□□□□□ -1.06
SNRPA1-207ENST00000559309 JMJD7-PLA2G4BH0Y9G9 81 aa8.43□□□□□ -1.06
SNRPA1-207ENST00000559309 C4orf48Q5BLP8 95 aa8.43□□□□□ -1.06
SNRPA1-207ENST00000559309 GTF2H5Q6ZYL4 71 aa8.43□□□□□ -1.06
SNRPA1-207ENST00000559309 RBM3P98179 157 aaKnown RBP8.42□□□□□ -1.06
SNRPA1-207ENST00000559309 MTURNQ8N3F0 131 aa8.42□□□□□ -1.06
SNRPA1-207ENST00000559309 TRBV7-7A0A0K0K1E9 115 aa8.41□□□□□ -1.06
SNRPA1-207ENST00000559309 TEN1Q86WV5 123 aa8.41□□□□□ -1.06
SNRPA1-207ENST00000559309 LOC110117498A0A087WWA1 95 aa8.4□□□□□ -1.06
SNRPA1-207ENST00000559309 ASB16-AS1Q495Z4 193 aa8.39□□□□□ -1.07
SNRPA1-207ENST00000559309 F8W1H4 67 aa8.38□□□□□ -1.07
SNRPA1-207ENST00000559309 HRCT1Q6UXD1 115 aa8.37□□□□□ -1.07
SNRPA1-207ENST00000559309 Q6ZQT0 140 aa8.37□□□□□ -1.07
SNRPA1-207ENST00000559309 LIMD2Q9BT23 127 aa8.37□□□□□ -1.07
SNRPA1-207ENST00000559309 A0A1B0GV90 55 aa8.36□□□□□ -1.07
SNRPA1-207ENST00000559309 A0A1B0GV72 72 aa8.35□□□□□ -1.07
SNRPA1-207ENST00000559309 PDE6GP18545 87 aa8.35□□□□□ -1.07
SNRPA1-207ENST00000559309 DSCR8Q96T75 97 aa8.35□□□□□ -1.07
SNRPA1-207ENST00000559309 A0A1B0GW54 56 aa8.33□□□□□ -1.08
SNRPA1-207ENST00000559309 CCKP06307 115 aa8.33□□□□□ -1.08
SNRPA1-207ENST00000559309 C14orf132Q9NPU4 83 aa8.33□□□□□ -1.08
SNRPA1-207ENST00000559309 LPAP08519 4548 aa8.33□□□□□ -1.08
SNRPA1-207ENST00000559309 C21orf62-AS1Q17RA5 79 aa8.32□□□□□ -1.08
SNRPA1-207ENST00000559309 C1orf195Q5TG92 126 aa8.32□□□□□ -1.08
SNRPA1-207ENST00000559309 FP248Q71RG6 208 aaPredicted RBP8.32□□□□□ -1.08
SNRPA1-207ENST00000559309 RETNLBQ9BQ08 111 aa8.31□□□□□ -1.08
SNRPA1-207ENST00000559309 A0A087WSZ3 146 aa8.3□□□□□ -1.08
SNRPA1-207ENST00000559309 Q96NJ1 140 aa8.3□□□□□ -1.08
SNRPA1-207ENST00000559309 SS18L2Q9UHA2 77 aa8.29□□□□□ -1.08
SNRPA1-207ENST00000559309 ETDBQ3ZM63 59 aa8.26□□□□□ -1.09
SNRPA1-207ENST00000559309 LINC00472Q9H8W2 130 aa8.25□□□□□ -1.09
SNRPA1-207ENST00000559309 TPRXLQ17RH7 258 aa8.24□□□□□ -1.09
SNRPA1-207ENST00000559309 IGLV7-46A0A075B6I9 117 aa8.22□□□□□ -1.09
SNRPA1-207ENST00000559309 PRR4Q16378 134 aa8.22□□□□□ -1.09
SNRPA1-207ENST00000559309 KRTAP13-3Q3SY46 172 aa8.22□□□□□ -1.09
SNRPA1-207ENST00000559309 LCE2CQ5TA81 110 aa8.22□□□□□ -1.09
SNRPA1-207ENST00000559309 VPS25Q9BRG1 176 aa8.22□□□□□ -1.09
SNRPA1-207ENST00000559309 MUC17Q685J3 4493 aa8.18□□□□□ -1.1
SNRPA1-207ENST00000559309 LINC00846Q9NV44 126 aa8.12□□□□□ -1.11
SNRPA1-207ENST00000559309 FAM240AA0A1B0GVK7 77 aa8.1□□□□□ -1.11
SNRPA1-207ENST00000559309 J3KT08 172 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms