RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 MUC4Q99102 2169 aa2.98□□□□□ -1.93
CASC4-208ENST00000559151 FAM223BA6NKX1 122 aa2.97□□□□□ -1.93
CASC4-208ENST00000559151 PLGLAQ15195 96 aa2.97□□□□□ -1.93
CASC4-208ENST00000559151 CDC42SE2Q9NRR3 84 aa2.97□□□□□ -1.93
CASC4-208ENST00000559151 V9GYH0 126 aa2.97□□□□□ -1.93
CASC4-208ENST00000559151 HEATR1Q9H583 2144 aaKnown RBP2.96□□□□□ -1.93
CASC4-208ENST00000559151 TENM2Q9NT68 2774 aa2.96□□□□□ -1.94
CASC4-208ENST00000559151 CEBPZOSA8MTT3 80 aa2.96□□□□□ -1.94
CASC4-208ENST00000559151 IGHV3-33P01772 117 aa2.96□□□□□ -1.94
CASC4-208ENST00000559151 DMAC1Q96GE9 116 aa2.96□□□□□ -1.94
CASC4-208ENST00000559151 TMEM14BQ9NUH8 114 aa2.96□□□□□ -1.94
CASC4-208ENST00000559151 PCLOQ9Y6V0 5065 aa2.95□□□□□ -1.94
CASC4-208ENST00000559151 RYR2Q92736 4967 aa2.95□□□□□ -1.94
CASC4-208ENST00000559151 DYNC2H1Q8NCM8 4307 aaKnown RBP2.95□□□□□ -1.94
CASC4-208ENST00000559151 LOC285095A0A1B0GVY8 99 aa2.95□□□□□ -1.94
CASC4-208ENST00000559151 LINC00322Q6ZN03 302 aaPredicted RBP2.95□□□□□ -1.94
CASC4-208ENST00000559151 NDUFA4L2Q9NRX3 87 aa2.95□□□□□ -1.94
CASC4-208ENST00000559151 PSENENQ9NZ42 101 aa2.95□□□□□ -1.94
CASC4-208ENST00000559151 MRPL36Q9P0J6 103 aaKnown RBP2.95□□□□□ -1.94
CASC4-208ENST00000559151 ARL2-SNX15V9GYD0 113 aa2.95□□□□□ -1.94
CASC4-208ENST00000559151 DNAH9Q9NYC9 4486 aa2.95□□□□□ -1.94
CASC4-208ENST00000559151 FXYD6-FXYD2A0A087WZ82 144 aa2.94□□□□□ -1.94
CASC4-208ENST00000559151 IGLV3-32A0A0A0MS00 114 aa2.94□□□□□ -1.94
CASC4-208ENST00000559151 NUPR2A6NF83 97 aa2.94□□□□□ -1.94
CASC4-208ENST00000559151 STATHP02808 62 aa2.94□□□□□ -1.94
CASC4-208ENST00000559151 ELOF1P60002 83 aaKnown RBP2.94□□□□□ -1.94
CASC4-208ENST00000559151 Q6JHZ5 121 aa2.94□□□□□ -1.94
CASC4-208ENST00000559151 BAGE3Q86Y29 109 aa2.94□□□□□ -1.94
CASC4-208ENST00000559151 BAGE2Q86Y30 109 aa2.94□□□□□ -1.94
CASC4-208ENST00000559151 FXYD6Q9H0Q3 95 aa2.94□□□□□ -1.94
CASC4-208ENST00000559151 NINQ8N4C6 2090 aa2.94□□□□□ -1.94
CASC4-208ENST00000559151 STAB2Q8WWQ8 2551 aa2.94□□□□□ -1.94
CASC4-208ENST00000559151 LOC101927531A0A1B0GV80 90 aa2.93□□□□□ -1.94
CASC4-208ENST00000559151 HMGN4O00479 90 aa2.93□□□□□ -1.94
CASC4-208ENST00000559151 PIN1P1O15428 100 aa2.93□□□□□ -1.94
CASC4-208ENST00000559151 DEFB110Q30KQ9 67 aa2.93□□□□□ -1.94
CASC4-208ENST00000559151 PROK2Q9HC23 129 aa2.93□□□□□ -1.94
CASC4-208ENST00000559151 GNG13Q9P2W3 67 aa2.93□□□□□ -1.94
CASC4-208ENST00000559151 LENEPQ9Y5L5 61 aa2.93□□□□□ -1.94
CASC4-208ENST00000559151 HIGD1CA8MV81 97 aa2.92□□□□□ -1.94
CASC4-208ENST00000559151 SNRPGP15A8MWD9 76 aa2.92□□□□□ -1.94
CASC4-208ENST00000559151 SAA2P0DJI9 122 aaPredicted RBP2.92□□□□□ -1.94
CASC4-208ENST00000559151 DNAH7Q8WXX0 4024 aa2.92□□□□□ -1.94
CASC4-208ENST00000559151 WNK2Q9Y3S1 2297 aa2.91□□□□□ -1.94
CASC4-208ENST00000559151 DNAH1Q9P2D7 4330 aa2.91□□□□□ -1.94
CASC4-208ENST00000559151 CLPSL1A2RUU4 121 aa2.91□□□□□ -1.94
CASC4-208ENST00000559151 H3BVH4 76 aa2.91□□□□□ -1.94
CASC4-208ENST00000559151 LEPROTL1O95214 131 aa2.91□□□□□ -1.94
CASC4-208ENST00000559151 ATP5EP2Q5VTU8 51 aa2.91□□□□□ -1.94
CASC4-208ENST00000559151 NCBP2-AS2Q69YL0 99 aa2.91□□□□□ -1.94
CASC4-208ENST00000559151 PPP1R17O96001 155 aa2.9□□□□□ -1.95
CASC4-208ENST00000559151 ARMS2P0C7Q2 107 aa2.9□□□□□ -1.95
CASC4-208ENST00000559151 IFI27P40305 119 aaPredicted RBP2.9□□□□□ -1.95
CASC4-208ENST00000559151 SSBP1Q04837 148 aaKnown RBP2.9□□□□□ -1.95
CASC4-208ENST00000559151 CCL19Q99731 98 aa2.9□□□□□ -1.95
CASC4-208ENST00000559151 FAM103A1Q9BTL3 118 aaKnown RBP2.9□□□□□ -1.95
CASC4-208ENST00000559151 SPAG11BQ08648 103 aa2.89□□□□□ -1.95
CASC4-208ENST00000559151 SPAG11AQ6PDA7 123 aa2.89□□□□□ -1.95
CASC4-208ENST00000559151 LYSTQ99698 3801 aa2.89□□□□□ -1.95
CASC4-208ENST00000559151 A0A0J9YY99 117 aa2.88□□□□□ -1.95
CASC4-208ENST00000559151 LCE6AA0A183 80 aa2.88□□□□□ -1.95
CASC4-208ENST00000559151 D6R8Y8 96 aa2.88□□□□□ -1.95
CASC4-208ENST00000559151 IGHV3-30P01768 117 aa2.88□□□□□ -1.95
CASC4-208ENST00000559151 IGHV3-30-5P0DP03 117 aa2.88□□□□□ -1.95
CASC4-208ENST00000559151 MUSTN1Q8IVN3 82 aa2.88□□□□□ -1.95
CASC4-208ENST00000559151 PRR15LQ9BU68 103 aa2.88□□□□□ -1.95
CASC4-208ENST00000559151 KRTAP4-1Q9BYQ7 146 aa2.88□□□□□ -1.95
CASC4-208ENST00000559151 UBE2D4Q9Y2X8 147 aa2.88□□□□□ -1.95
CASC4-208ENST00000559151 CSMD3Q7Z407 3707 aa2.88□□□□□ -1.95
CASC4-208ENST00000559151 FRAS1Q86XX4 4008 aa2.86□□□□□ -1.95
CASC4-208ENST00000559151 DEFB108AA8MXU0 73 aa2.86□□□□□ -1.95
CASC4-208ENST00000559151 H0YGG7 62 aa2.86□□□□□ -1.95
CASC4-208ENST00000559151 Q86TA4 180 aa2.86□□□□□ -1.95
CASC4-208ENST00000559151 A0A096LNT2 108 aa2.85□□□□□ -1.95
CASC4-208ENST00000559151 PPYP01298 95 aa2.85□□□□□ -1.95
CASC4-208ENST00000559151 ATXN8Q156A1 80 aa2.85□□□□□ -1.95
CASC4-208ENST00000559151 HERC2O95714 4834 aa2.85□□□□□ -1.95
CASC4-208ENST00000559151 PLECQ15149 4684 aaKnown RBP2.84□□□□□ -1.95
CASC4-208ENST00000559151 UBR4Q5T4S7 5183 aa2.84□□□□□ -1.95
CASC4-208ENST00000559151 CCL22O00626 93 aa2.84□□□□□ -1.95
CASC4-208ENST00000559151 COX7B2Q8TF08 81 aa2.84□□□□□ -1.95
CASC4-208ENST00000559151 AMELXQ99217 191 aa2.84□□□□□ -1.95
CASC4-208ENST00000559151 DOCK11Q5JSL3 2073 aa2.84□□□□□ -1.95
CASC4-208ENST00000559151 CCL3L1P16619 93 aa2.83□□□□□ -1.96
CASC4-208ENST00000559151 FAM74A4Q5TZK3 123 aa2.83□□□□□ -1.96
CASC4-208ENST00000559151 PPP1R1CQ8WVI7 109 aa2.83□□□□□ -1.96
CASC4-208ENST00000559151 R4GMQ9 66 aa2.83□□□□□ -1.96
CASC4-208ENST00000559151 F8VRH5 84 aa2.82□□□□□ -1.96
CASC4-208ENST00000559151 JMJD7-PLA2G4BH0Y9G9 81 aa2.82□□□□□ -1.96
CASC4-208ENST00000559151 IGLV3-1P01715 115 aa2.82□□□□□ -1.96
CASC4-208ENST00000559151 PDE6GP18545 87 aa2.82□□□□□ -1.96
CASC4-208ENST00000559151 STARD9Q9P2P6 4700 aa2.82□□□□□ -1.96
CASC4-208ENST00000559151 HUWE1Q7Z6Z7 4374 aaKnown RBP2.82□□□□□ -1.96
CASC4-208ENST00000559151 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.81□□□□□ -1.96
CASC4-208ENST00000559151 A0A087WVE0 104 aa2.81□□□□□ -1.96
CASC4-208ENST00000559151 TRBV7-4A0A0J9YYF1 115 aa2.81□□□□□ -1.96
CASC4-208ENST00000559151 M0R3E3 92 aa2.81□□□□□ -1.96
CASC4-208ENST00000559151 S100A3P33764 101 aa2.81□□□□□ -1.96
CASC4-208ENST00000559151 CCL18P55774 89 aa2.81□□□□□ -1.96
CASC4-208ENST00000559151 NCR3O14931 201 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms