RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 H3BNG1 76 aa1.96□□□□□ -2.1
HERC1-203ENST00000558532 DEFB130BP0DP73 79 aa1.96□□□□□ -2.1
HERC1-203ENST00000558532 DEFB130AP0DP74 79 aa1.96□□□□□ -2.1
HERC1-203ENST00000558532 PRR4Q16378 134 aa1.96□□□□□ -2.1
HERC1-203ENST00000558532 DEFB123Q8N688 67 aa1.96□□□□□ -2.1
HERC1-203ENST00000558532 NKAPP1Q8N9T2 125 aa1.96□□□□□ -2.1
HERC1-203ENST00000558532 CAMK2N2Q96S95 79 aa1.96□□□□□ -2.1
HERC1-203ENST00000558532 ANAPC11Q9NYG5 84 aa1.96□□□□□ -2.1
HERC1-203ENST00000558532 MAP1AP78559 2803 aaPredicted RBP1.96□□□□□ -2.1
HERC1-203ENST00000558532 CSPG4Q6UVK1 2322 aa1.96□□□□□ -2.1
HERC1-203ENST00000558532 SVEP1Q4LDE5 3571 aa1.95□□□□□ -2.1
HERC1-203ENST00000558532 DMXL1Q9Y485 3027 aa1.95□□□□□ -2.1
HERC1-203ENST00000558532 DEFB131BA0A096LNP1 70 aa1.95□□□□□ -2.1
HERC1-203ENST00000558532 A0A096LPF7 62 aa1.95□□□□□ -2.1
HERC1-203ENST00000558532 MMP24-AS1A0A0U1RRL7 71 aa1.95□□□□□ -2.1
HERC1-203ENST00000558532 A8MWP4 228 aa1.95□□□□□ -2.1
HERC1-203ENST00000558532 PRB1P04280 392 aa1.95□□□□□ -2.1
HERC1-203ENST00000558532 SPRR1BP22528 89 aa1.95□□□□□ -2.1
HERC1-203ENST00000558532 IGFL1Q6UW32 110 aa1.95□□□□□ -2.1
HERC1-203ENST00000558532 CASC2Q6XLA1 102 aa1.95□□□□□ -2.1
HERC1-203ENST00000558532 Q8NAQ8 132 aa1.95□□□□□ -2.1
HERC1-203ENST00000558532 SPTSSBQ8NFR3 76 aa1.95□□□□□ -2.1
HERC1-203ENST00000558532 LINC00472Q9H8W2 130 aa1.95□□□□□ -2.1
HERC1-203ENST00000558532 SETXQ7Z333 2677 aaKnown RBP1.94□□□□□ -2.1
HERC1-203ENST00000558532 NBPF19A0A087WUL8 3843 aa1.94□□□□□ -2.1
HERC1-203ENST00000558532 GVINP1Q7Z2Y8 2422 aa1.94□□□□□ -2.1
HERC1-203ENST00000558532 RTL8CO15255 209 aa1.94□□□□□ -2.1
HERC1-203ENST00000558532 KRTAP10-8P60410 259 aa1.94□□□□□ -2.1
HERC1-203ENST00000558532 LINC01554Q52M75 96 aa1.94□□□□□ -2.1
HERC1-203ENST00000558532 WFDC13Q8IUB5 93 aa1.94□□□□□ -2.1
HERC1-203ENST00000558532 TP53AIP1Q9HCN2 124 aa1.94□□□□□ -2.1
HERC1-203ENST00000558532 LAMA5O15230 3695 aa1.94□□□□□ -2.1
HERC1-203ENST00000558532 CEP295Q9C0D2 2601 aa1.94□□□□□ -2.1
HERC1-203ENST00000558532 RELNP78509 3460 aa1.94□□□□□ -2.1
HERC1-203ENST00000558532 ATMQ13315 3056 aa1.94□□□□□ -2.1
HERC1-203ENST00000558532 VPS13CQ709C8 3753 aa1.94□□□□□ -2.1
HERC1-203ENST00000558532 OBSCNQ5VST9 7968 aa1.93□□□□□ -2.1
HERC1-203ENST00000558532 SPINK7P58062 85 aa1.93□□□□□ -2.1
HERC1-203ENST00000558532 LINC00313P59037 77 aa1.93□□□□□ -2.1
HERC1-203ENST00000558532 TLN2Q9Y4G6 2542 aa1.93□□□□□ -2.1
HERC1-203ENST00000558532 NBASA2RRP1 2371 aa1.93□□□□□ -2.1
HERC1-203ENST00000558532 DOPEY1Q5JWR5 2465 aa1.93□□□□□ -2.1
HERC1-203ENST00000558532 CELSR2Q9HCU4 2923 aa1.93□□□□□ -2.1
HERC1-203ENST00000558532 NCOR2Q9Y618 2525 aa1.92□□□□□ -2.1
HERC1-203ENST00000558532 A0A087WSZ3 146 aa1.92□□□□□ -2.1
HERC1-203ENST00000558532 IGKV2-24A0A0C4DH68 120 aa1.92□□□□□ -2.1
HERC1-203ENST00000558532 H0Y9J4 135 aa1.92□□□□□ -2.1
HERC1-203ENST00000558532 HRES1P13985 223 aa1.92□□□□□ -2.1
HERC1-203ENST00000558532 LINC01556Q5JQF7 62 aa1.92□□□□□ -2.1
HERC1-203ENST00000558532 DEFB105AQ8NG35 78 aa1.92□□□□□ -2.1
HERC1-203ENST00000558532 MYO9AB2RTY4 2548 aa1.91□□□□□ -2.1
HERC1-203ENST00000558532 JMJD1CQ15652 2540 aa1.91□□□□□ -2.1
HERC1-203ENST00000558532 CHD6Q8TD26 2715 aa1.91□□□□□ -2.1
HERC1-203ENST00000558532 ASH1LQ9NR48 2969 aaKnown RBP1.91□□□□□ -2.1
HERC1-203ENST00000558532 SPART-AS1P0CW21 52 aa1.91□□□□□ -2.1
HERC1-203ENST00000558532 SPATA8Q6RVD6 105 aa1.91□□□□□ -2.1
HERC1-203ENST00000558532 WFDC10BQ8IUB3 73 aa1.91□□□□□ -2.1
HERC1-203ENST00000558532 Q96NJ1 140 aa1.91□□□□□ -2.1
HERC1-203ENST00000558532 ITPR1Q14643 2758 aa1.91□□□□□ -2.1
HERC1-203ENST00000558532 MUC3AQ02505 3323 aa1.9□□□□□ -2.1
HERC1-203ENST00000558532 RPL37AP61513 92 aaKnown RBP1.9□□□□□ -2.11
HERC1-203ENST00000558532 SPAG11AQ6PDA7 123 aa1.9□□□□□ -2.11
HERC1-203ENST00000558532 KRTAP4-3Q9BYR4 195 aa1.9□□□□□ -2.11
HERC1-203ENST00000558532 SPG11Q96JI7 2443 aa1.9□□□□□ -2.11
HERC1-203ENST00000558532 MXRA5Q9NR99 2828 aa1.9□□□□□ -2.11
HERC1-203ENST00000558532 NOTCH2Q04721 2471 aa1.89□□□□□ -2.11
HERC1-203ENST00000558532 PTPN13Q12923 2485 aa1.89□□□□□ -2.11
HERC1-203ENST00000558532 TTC28Q96AY4 2481 aa1.89□□□□□ -2.11
HERC1-203ENST00000558532 ALMS1Q8TCU4 4167 aa1.89□□□□□ -2.11
HERC1-203ENST00000558532 PRB2P02812 416 aaPredicted RBP1.89□□□□□ -2.11
HERC1-203ENST00000558532 DEFB135Q30KP9 77 aa1.89□□□□□ -2.11
HERC1-203ENST00000558532 DEFB116Q30KQ4 102 aa1.89□□□□□ -2.11
HERC1-203ENST00000558532 DEFB113Q30KQ7 82 aa1.89□□□□□ -2.11
HERC1-203ENST00000558532 DMAC1Q96GE9 116 aa1.89□□□□□ -2.11
HERC1-203ENST00000558532 IGF2RP11717 2491 aa1.88□□□□□ -2.11
HERC1-203ENST00000558532 RIF1Q5UIP0 2472 aaKnown RBP1.88□□□□□ -2.11
HERC1-203ENST00000558532 C8orf17Q9NRJ1 99 aa1.88□□□□□ -2.11
HERC1-203ENST00000558532 ANKRD17O75179 2603 aaKnown RBP1.88□□□□□ -2.11
HERC1-203ENST00000558532 FN1P02751 2386 aaKnown RBP1.88□□□□□ -2.11
HERC1-203ENST00000558532 APCP25054 2843 aa1.88□□□□□ -2.11
HERC1-203ENST00000558532 MUC6Q6W4X9 2439 aa1.87□□□□□ -2.11
HERC1-203ENST00000558532 USP9YO00507 2555 aaPredicted RBP1.87□□□□□ -2.11
HERC1-203ENST00000558532 A0A0G2JQZ4 141 aa1.87□□□□□ -2.11
HERC1-203ENST00000558532 A0A1B0GVX0 72 aa1.87□□□□□ -2.11
HERC1-203ENST00000558532 A0A1W2PNN7 141 aa1.87□□□□□ -2.11
HERC1-203ENST00000558532 PCOTHQ58A44 107 aa1.87□□□□□ -2.11
HERC1-203ENST00000558532 ADM2Q7Z4H4 148 aa1.87□□□□□ -2.11
HERC1-203ENST00000558532 KRTAP13-1Q8IUC0 172 aa1.87□□□□□ -2.11
HERC1-203ENST00000558532 MRPL34Q9BQ48 92 aaKnown RBP1.87□□□□□ -2.11
HERC1-203ENST00000558532 ZFYVE26Q68DK2 2539 aa1.87□□□□□ -2.11
HERC1-203ENST00000558532 USP9XQ93008 2570 aaPredicted RBP1.87□□□□□ -2.11
HERC1-203ENST00000558532 COL12A1Q99715 3063 aa1.87□□□□□ -2.11
HERC1-203ENST00000558532 UTP20O75691 2785 aaKnown RBP1.87□□□□□ -2.11
HERC1-203ENST00000558532 ZANQ9Y493 2812 aa1.86□□□□□ -2.11
HERC1-203ENST00000558532 EPG5Q9HCE0 2579 aa1.86□□□□□ -2.11
HERC1-203ENST00000558532 DEFB4AO15263 64 aa1.86□□□□□ -2.11
HERC1-203ENST00000558532 CHTF8P0CG12 524 aa1.86□□□□□ -2.11
HERC1-203ENST00000558532 PRLHP81277 87 aa1.86□□□□□ -2.11
HERC1-203ENST00000558532 LINC00483Q53H64 154 aa1.86□□□□□ -2.11
HERC1-203ENST00000558532 CRYBG3Q68DQ2 2970 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms