RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 C1orf195Q5TG92 126 aa6.49□□□□□ -1.37
HERC1-202ENST00000558324 Q6ZQY7 126 aa6.49□□□□□ -1.37
HERC1-202ENST00000558324 HIST1H4GQ99525 98 aa6.49□□□□□ -1.37
HERC1-202ENST00000558324 hADV29S1A0JD25 119 aa6.48□□□□□ -1.37
HERC1-202ENST00000558324 Q5XG85 94 aa6.48□□□□□ -1.37
HERC1-202ENST00000558324 IGLV8-61A0A075B6I0 122 aa6.47□□□□□ -1.37
HERC1-202ENST00000558324 COX8AP10176 69 aa6.46□□□□□ -1.38
HERC1-202ENST00000558324 TCL1BO95988 128 aa6.45□□□□□ -1.38
HERC1-202ENST00000558324 BVES-AS1Q5T3Y7 98 aa6.43□□□□□ -1.38
HERC1-202ENST00000558324 CLEC2BQ92478 149 aa6.43□□□□□ -1.38
HERC1-202ENST00000558324 C14orf144Q96I85 54 aa6.43□□□□□ -1.38
HERC1-202ENST00000558324 PAM16Q9Y3D7 125 aa6.43□□□□□ -1.38
HERC1-202ENST00000558324 Q6JHZ5 121 aa6.42□□□□□ -1.38
HERC1-202ENST00000558324 IGFL1Q6UW32 110 aa6.42□□□□□ -1.38
HERC1-202ENST00000558324 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.42□□□□□ -1.38
HERC1-202ENST00000558324 DLEU1O43261 78 aa6.41□□□□□ -1.38
HERC1-202ENST00000558324 OCIAD2Q56VL3 154 aa6.41□□□□□ -1.38
HERC1-202ENST00000558324 TRBV7-7A0A0K0K1E9 115 aa6.4□□□□□ -1.38
HERC1-202ENST00000558324 H3BUT2 72 aa6.4□□□□□ -1.38
HERC1-202ENST00000558324 SPATA45Q537H7 98 aa6.4□□□□□ -1.38
HERC1-202ENST00000558324 LCE2CQ5TA81 110 aa6.4□□□□□ -1.38
HERC1-202ENST00000558324 RAB37Q96AX2 223 aa6.4□□□□□ -1.38
HERC1-202ENST00000558324 SNHG12Q9BXW3 62 aa6.4□□□□□ -1.38
HERC1-202ENST00000558324 CFC1BP0CG36 223 aa6.39□□□□□ -1.39
HERC1-202ENST00000558324 CFC1P0CG37 223 aa6.39□□□□□ -1.39
HERC1-202ENST00000558324 RPL37P61927 97 aaKnown RBP6.39□□□□□ -1.39
HERC1-202ENST00000558324 KRTAP19-2Q3LHN2 52 aa6.38□□□□□ -1.39
HERC1-202ENST00000558324 VAMP8Q9BV40 100 aa6.38□□□□□ -1.39
HERC1-202ENST00000558324 C2orf91Q6ZV80 131 aa6.37□□□□□ -1.39
HERC1-202ENST00000558324 PPDPFLQ8WWR9 84 aa6.37□□□□□ -1.39
HERC1-202ENST00000558324 HIGD1BQ9P298 99 aa6.37□□□□□ -1.39
HERC1-202ENST00000558324 A0A0B4J2C4 111 aa6.36□□□□□ -1.39
HERC1-202ENST00000558324 FAM218AQ96MZ4 157 aa6.36□□□□□ -1.39
HERC1-202ENST00000558324 SNCGO76070 127 aa6.34□□□□□ -1.39
HERC1-202ENST00000558324 MT1HP80294 61 aa6.34□□□□□ -1.39
HERC1-202ENST00000558324 H0YGX0 51 aa6.33□□□□□ -1.4
HERC1-202ENST00000558324 M0R143 59 aa6.33□□□□□ -1.4
HERC1-202ENST00000558324 CEND1Q8N111 149 aa6.33□□□□□ -1.4
HERC1-202ENST00000558324 OBSCN-AS1Q96MR7 158 aa6.33□□□□□ -1.4
HERC1-202ENST00000558324 KRTAP9-6A0A140TA67 174 aa6.32□□□□□ -1.4
HERC1-202ENST00000558324 LST1O00453 97 aa6.32□□□□□ -1.4
HERC1-202ENST00000558324 NDUFV3P56181 108 aaKnown RBP6.32□□□□□ -1.4
HERC1-202ENST00000558324 TMEM238LA0A1B0GVL6 79 aa6.31□□□□□ -1.4
HERC1-202ENST00000558324 A6NJY4 79 aa6.31□□□□□ -1.4
HERC1-202ENST00000558324 FXYD2P54710 66 aa6.31□□□□□ -1.4
HERC1-202ENST00000558324 PRO1854Q9UHT4 67 aa6.31□□□□□ -1.4
HERC1-202ENST00000558324 FABP2P12104 132 aa6.3□□□□□ -1.4
HERC1-202ENST00000558324 COX6B2Q6YFQ2 88 aa6.3□□□□□ -1.4
HERC1-202ENST00000558324 A0A1B0GV90 55 aa6.29□□□□□ -1.4
HERC1-202ENST00000558324 UQCR10Q9UDW1 63 aa6.29□□□□□ -1.4
HERC1-202ENST00000558324 SS18L2Q9UHA2 77 aa6.29□□□□□ -1.4
HERC1-202ENST00000558324 A0A087WSZ3 146 aa6.28□□□□□ -1.4
HERC1-202ENST00000558324 H3BMG7 143 aa6.28□□□□□ -1.4
HERC1-202ENST00000558324 TRIAP1O43715 76 aa6.28□□□□□ -1.4
HERC1-202ENST00000558324 LCE2DQ5TA82 110 aaPredicted RBP6.27□□□□□ -1.41
HERC1-202ENST00000558324 Q6Q795 121 aa6.27□□□□□ -1.41
HERC1-202ENST00000558324 ATP11AUNQ6ZP68 121 aa6.27□□□□□ -1.41
HERC1-202ENST00000558324 TEN1Q86WV5 123 aa6.27□□□□□ -1.41
HERC1-202ENST00000558324 Q96NJ1 140 aa6.27□□□□□ -1.41
HERC1-202ENST00000558324 A0A1B0GV72 72 aa6.26□□□□□ -1.41
HERC1-202ENST00000558324 A0A1B0GX51 115 aa6.26□□□□□ -1.41
HERC1-202ENST00000558324 K7ERJ3 54 aa6.26□□□□□ -1.41
HERC1-202ENST00000558324 M0R2T5 61 aa6.26□□□□□ -1.41
HERC1-202ENST00000558324 Q75L30 129 aa6.26□□□□□ -1.41
HERC1-202ENST00000558324 GHRHP01286 108 aa6.25□□□□□ -1.41
HERC1-202ENST00000558324 FSIP2Q5CZC0 6907 aa6.24□□□□□ -1.41
HERC1-202ENST00000558324 PSMB2P49721 201 aa6.24□□□□□ -1.41
HERC1-202ENST00000558324 HSD52Q0P140 79 aa6.24□□□□□ -1.41
HERC1-202ENST00000558324 DNAL4O96015 105 aa6.23□□□□□ -1.41
HERC1-202ENST00000558324 COL5A1-AS1Q5SY13 56 aa6.23□□□□□ -1.41
HERC1-202ENST00000558324 A0A1W2PNM2 257 aa6.22□□□□□ -1.41
HERC1-202ENST00000558324 KRTAP10-6P60371 365 aaPredicted RBP6.22□□□□□ -1.41
HERC1-202ENST00000558324 SIGMAR1Q99720 223 aa6.22□□□□□ -1.41
HERC1-202ENST00000558324 LORP23490 312 aaPredicted RBP6.21□□□□□ -1.42
HERC1-202ENST00000558324 BATFQ16520 125 aa6.21□□□□□ -1.42
HERC1-202ENST00000558324 ORMDL1Q9P0S3 153 aa6.21□□□□□ -1.42
HERC1-202ENST00000558324 DSCR10P59022 87 aa6.2□□□□□ -1.42
HERC1-202ENST00000558324 ANKRD29Q8N6D5 301 aa6.2□□□□□ -1.42
HERC1-202ENST00000558324 C20orf166-AS1Q96NR2 134 aa6.19□□□□□ -1.42
HERC1-202ENST00000558324 COX6CP09669 75 aa6.18□□□□□ -1.42
HERC1-202ENST00000558324 FLGP20930 4061 aaPredicted RBP6.17□□□□□ -1.42
HERC1-202ENST00000558324 A8MUU9 505 aa6.17□□□□□ -1.42
HERC1-202ENST00000558324 TMEM256-PLSCR3K7ERE1 68 aa6.16□□□□□ -1.42
HERC1-202ENST00000558324 IGKV4-1P06312 121 aa6.16□□□□□ -1.42
HERC1-202ENST00000558324 CRCT1Q9UGL9 99 aa6.16□□□□□ -1.42
HERC1-202ENST00000558324 TRBV7-4A0A0J9YYF1 115 aa6.15□□□□□ -1.42
HERC1-202ENST00000558324 DEFB116Q30KQ4 102 aa6.15□□□□□ -1.42
HERC1-202ENST00000558324 H3BQ85 93 aa6.14□□□□□ -1.43
HERC1-202ENST00000558324 TRACP01848 142 aa6.14□□□□□ -1.43
HERC1-202ENST00000558324 CCKP06307 115 aa6.14□□□□□ -1.43
HERC1-202ENST00000558324 SCGB1C2P0DMR2 95 aa6.13□□□□□ -1.43
HERC1-202ENST00000558324 VPS25Q9BRG1 176 aa6.13□□□□□ -1.43
HERC1-202ENST00000558324 LINC00313P59037 77 aa6.12□□□□□ -1.43
HERC1-202ENST00000558324 UBE2V1Q13404 147 aa6.11□□□□□ -1.43
HERC1-202ENST00000558324 NOTCH2NLQ7Z3S9 236 aa6.11□□□□□ -1.43
HERC1-202ENST00000558324 TRBV20-1A0A075B6N2 111 aa6.1□□□□□ -1.43
HERC1-202ENST00000558324 IGHV6-1A0A0B4J1U7 121 aa6.1□□□□□ -1.43
HERC1-202ENST00000558324 KRTAP16-1A8MUX0 517 aa6.1□□□□□ -1.43
HERC1-202ENST00000558324 LINC00472Q9H8W2 130 aa6.1□□□□□ -1.43
HERC1-202ENST00000558324 RBM3P98179 157 aaKnown RBP6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms