RNA–Protein interactions for RNA: ENST00000558271.5

LRRC49-209, Transcript of leucine rich repeat containing 49, humanhuman

TSL 4

Gene LRRC49, Length 573 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-209ENST00000558271 HTN3P15516 51 aa0.55□□□□□ -2.32
LRRC49-209ENST00000558271 SPINK6Q6UWN8 80 aa0.55□□□□□ -2.32
LRRC49-209ENST00000558271 APLNQ9ULZ1 77 aa0.55□□□□□ -2.32
LRRC49-209ENST00000558271 FN1P02751 2386 aaKnown RBP0.55□□□□□ -2.32
LRRC49-209ENST00000558271 NAV3Q8IVL0 2385 aa0.55□□□□□ -2.32
LRRC49-209ENST00000558271 WDR87Q6ZQQ6 2873 aa0.55□□□□□ -2.32
LRRC49-209ENST00000558271 ZFHX2Q9C0A1 2572 aaPredicted RBP0.54□□□□□ -2.32
LRRC49-209ENST00000558271 NBPF19A0A087WUL8 3843 aa0.54□□□□□ -2.32
LRRC49-209ENST00000558271 SPENQ96T58 3664 aaKnown RBP0.54□□□□□ -2.32
LRRC49-209ENST00000558271 GOLGB1Q14789 3259 aaKnown RBP0.54□□□□□ -2.32
LRRC49-209ENST00000558271 MYCBP2O75592 4640 aa0.54□□□□□ -2.32
LRRC49-209ENST00000558271 DEFB4AO15263 64 aa0.54□□□□□ -2.32
LRRC49-209ENST00000558271 COX17Q14061 63 aa0.54□□□□□ -2.32
LRRC49-209ENST00000558271 KLK9Q2XQG4 91 aa0.54□□□□□ -2.32
LRRC49-209ENST00000558271 H1FX-AS1Q4G0G2 97 aa0.54□□□□□ -2.32
LRRC49-209ENST00000558271 SPACA4Q8TDM5 124 aa0.54□□□□□ -2.32
LRRC49-209ENST00000558271 ASCC3Q8N3C0 2202 aaKnown RBP0.54□□□□□ -2.32
LRRC49-209ENST00000558271 PTPRQQ9UMZ3 2332 aa0.54□□□□□ -2.32
LRRC49-209ENST00000558271 PCNTO95613 3336 aa0.54□□□□□ -2.32
LRRC49-209ENST00000558271 WDFY3Q8IZQ1 3526 aa0.54□□□□□ -2.32
LRRC49-209ENST00000558271 TNCP24821 2201 aa0.53□□□□□ -2.32
LRRC49-209ENST00000558271 KIAA0100Q14667 2235 aaKnown RBP0.53□□□□□ -2.32
LRRC49-209ENST00000558271 CHD7Q9P2D1 2997 aa0.53□□□□□ -2.32
LRRC49-209ENST00000558271 IGLV5-48A0A075B6I7 105 aa0.53□□□□□ -2.32
LRRC49-209ENST00000558271 GVQW2A0A096LPI5 108 aaPredicted RBP0.53□□□□□ -2.32
LRRC49-209ENST00000558271 DEFB109BQ30KR1 87 aa0.53□□□□□ -2.32
LRRC49-209ENST00000558271 Q6ZRN7 208 aaPredicted RBP0.53□□□□□ -2.32
LRRC49-209ENST00000558271 DEFB132Q7Z7B7 95 aa0.53□□□□□ -2.32
LRRC49-209ENST00000558271 MRPL34Q9BQ48 92 aaKnown RBP0.53□□□□□ -2.32
LRRC49-209ENST00000558271 TP53AIP1Q9HCN2 124 aa0.53□□□□□ -2.32
LRRC49-209ENST00000558271 DNAH14Q0VDD8 3507 aa0.53□□□□□ -2.32
LRRC49-209ENST00000558271 MGAQ8IWI9 3026 aa0.53□□□□□ -2.33
LRRC49-209ENST00000558271 COL6A6A6NMZ7 2263 aa0.53□□□□□ -2.33
LRRC49-209ENST00000558271 ABCA4P78363 2273 aa0.53□□□□□ -2.33
LRRC49-209ENST00000558271 CEP350Q5VT06 3117 aa0.53□□□□□ -2.33
LRRC49-209ENST00000558271 SMG1Q96Q15 3661 aaKnown RBP0.52□□□□□ -2.33
LRRC49-209ENST00000558271 USF3Q68DE3 2245 aa0.52□□□□□ -2.33
LRRC49-209ENST00000558271 URB1O60287 2271 aaKnown RBP0.52□□□□□ -2.33
LRRC49-209ENST00000558271 DOPEY2Q9Y3R5 2298 aa0.52□□□□□ -2.33
LRRC49-209ENST00000558271 H3BUX3 64 aa0.52□□□□□ -2.33
LRRC49-209ENST00000558271 PLAC4Q8WY50 150 aa0.52□□□□□ -2.33
LRRC49-209ENST00000558271 CENPFP49454 3210 aa0.52□□□□□ -2.33
LRRC49-209ENST00000558271 XIRP2A4UGR9 3374 aa0.52□□□□□ -2.33
LRRC49-209ENST00000558271 TECTAO75443 2155 aa0.52□□□□□ -2.33
LRRC49-209ENST00000558271 DNAH11Q96DT5 4516 aa0.52□□□□□ -2.33
LRRC49-209ENST00000558271 ANKRD17O75179 2603 aaKnown RBP0.51□□□□□ -2.33
LRRC49-209ENST00000558271 FRYLO94915 3013 aa0.51□□□□□ -2.33
LRRC49-209ENST00000558271 LAMA5O15230 3695 aa0.51□□□□□ -2.33
LRRC49-209ENST00000558271 SRCAPQ6ZRS2 3230 aa0.51□□□□□ -2.33
LRRC49-209ENST00000558271 CNTRLQ7Z7A1 2325 aa0.51□□□□□ -2.33
LRRC49-209ENST00000558271 UBE2DNLQ8IWF7 75 aa0.51□□□□□ -2.33
LRRC49-209ENST00000558271 KNL1Q8NG31 2342 aa0.51□□□□□ -2.33
LRRC49-209ENST00000558271 USMG5Q96IX5 58 aa0.51□□□□□ -2.33
LRRC49-209ENST00000558271 CFAP54Q96N23 3096 aa0.51□□□□□ -2.33
LRRC49-209ENST00000558271 PRO2289Q9P1D8 64 aa0.51□□□□□ -2.33
LRRC49-209ENST00000558271 Q9Y3F1 56 aa0.51□□□□□ -2.33
LRRC49-209ENST00000558271 BRCA2P51587 3418 aa0.51□□□□□ -2.33
LRRC49-209ENST00000558271 TNRC18O15417 2968 aaPredicted RBP0.51□□□□□ -2.33
LRRC49-209ENST00000558271 CRYBG3Q68DQ2 2970 aa0.51□□□□□ -2.33
LRRC49-209ENST00000558271 RPL37P61927 97 aaKnown RBP0.5□□□□□ -2.33
LRRC49-209ENST00000558271 DEFB135Q30KP9 77 aa0.5□□□□□ -2.33
LRRC49-209ENST00000558271 COX6B2Q6YFQ2 88 aa0.5□□□□□ -2.33
LRRC49-209ENST00000558271 S4R3F8 94 aa0.5□□□□□ -2.33
LRRC49-209ENST00000558271 U3KQA8 63 aa0.5□□□□□ -2.33
LRRC49-209ENST00000558271 IGF2RP11717 2491 aa0.5□□□□□ -2.33
LRRC49-209ENST00000558271 CSMD1Q96PZ7 3565 aa0.5□□□□□ -2.33
LRRC49-209ENST00000558271 PDE4DIPQ5VU43 2346 aa0.5□□□□□ -2.33
LRRC49-209ENST00000558271 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.5□□□□□ -2.33
LRRC49-209ENST00000558271 ASXL3Q9C0F0 2248 aa0.5□□□□□ -2.33
LRRC49-209ENST00000558271 LYSTQ99698 3801 aa0.5□□□□□ -2.33
LRRC49-209ENST00000558271 VPS13CQ709C8 3753 aa0.5□□□□□ -2.33
LRRC49-209ENST00000558271 PIEZO2Q9H5I5 2752 aa0.5□□□□□ -2.33
LRRC49-209ENST00000558271 MYO15AQ9UKN7 3530 aa0.5□□□□□ -2.33
LRRC49-209ENST00000558271 BSNQ9UPA5 3926 aa0.49□□□□□ -2.33
LRRC49-209ENST00000558271 BRWD1Q9NSI6 2320 aa0.49□□□□□ -2.33
LRRC49-209ENST00000558271 PLCE1Q9P212 2302 aa0.49□□□□□ -2.33
LRRC49-209ENST00000558271 ABCA1O95477 2261 aa0.49□□□□□ -2.33
LRRC49-209ENST00000558271 OTOGQ6ZRI0 2925 aa0.49□□□□□ -2.33
LRRC49-209ENST00000558271 NBEAQ8NFP9 2946 aa0.49□□□□□ -2.33
LRRC49-209ENST00000558271 MKI67P46013 3256 aaKnown RBP0.49□□□□□ -2.33
LRRC49-209ENST00000558271 TRRAPQ9Y4A5 3859 aa0.49□□□□□ -2.33
LRRC49-209ENST00000558271 H3BUA1 57 aa0.49□□□□□ -2.33
LRRC49-209ENST00000558271 KRTAP10-4P60372 401 aaPredicted RBP0.49□□□□□ -2.33
LRRC49-209ENST00000558271 C4orf3Q8WVX3 66 aa0.49□□□□□ -2.33
LRRC49-209ENST00000558271 PRO0255Q9UI72 69 aa0.49□□□□□ -2.33
LRRC49-209ENST00000558271 VPS13DQ5THJ4 4388 aa0.49□□□□□ -2.33
LRRC49-209ENST00000558271 CFAP47Q6ZTR5 3102 aa0.49□□□□□ -2.33
LRRC49-209ENST00000558271 PRUNE2Q8WUY3 3088 aa0.49□□□□□ -2.33
LRRC49-209ENST00000558271 PTPRZ1P23471 2315 aaPredicted RBP0.49□□□□□ -2.33
LRRC49-209ENST00000558271 CHD9Q3L8U1 2897 aa0.49□□□□□ -2.33
LRRC49-209ENST00000558271 RANBP2P49792 3224 aaKnown RBP0.49□□□□□ -2.33
LRRC49-209ENST00000558271 WDFY4Q6ZS81 3184 aa0.49□□□□□ -2.33
LRRC49-209ENST00000558271 ANK2Q01484 3957 aa0.48□□□□□ -2.33
LRRC49-209ENST00000558271 AKAP13Q12802 2813 aa0.48□□□□□ -2.33
LRRC49-209ENST00000558271 CACNA1EQ15878 2313 aa0.48□□□□□ -2.33
LRRC49-209ENST00000558271 LAMA2P24043 3122 aaKnown RBP0.48□□□□□ -2.33
LRRC49-209ENST00000558271 TRIOO75962 3097 aa0.48□□□□□ -2.33
LRRC49-209ENST00000558271 RELNP78509 3460 aa0.48□□□□□ -2.33
LRRC49-209ENST00000558271 C9orf92A6NGG3 77 aa0.48□□□□□ -2.33
LRRC49-209ENST00000558271 ZZEF1O43149 2961 aa0.48□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms