RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 RPL39LQ96EH5 51 aaKnown RBP0.74□□□□□ -2.29
HIF1A-212ENST00000557538 DOCK10Q96BY6 2186 aa0.74□□□□□ -2.29
HIF1A-212ENST00000557538 VPS13CQ709C8 3753 aa0.74□□□□□ -2.29
HIF1A-212ENST00000557538 CREBBPQ92793 2442 aa0.74□□□□□ -2.29
HIF1A-212ENST00000557538 CACNA1CQ13936 2221 aa0.74□□□□□ -2.29
HIF1A-212ENST00000557538 CSMD1Q96PZ7 3565 aa0.74□□□□□ -2.29
HIF1A-212ENST00000557538 PRCDQ00LT1 54 aa0.74□□□□□ -2.29
HIF1A-212ENST00000557538 DEFB112Q30KQ8 113 aa0.74□□□□□ -2.29
HIF1A-212ENST00000557538 ANK3Q12955 4377 aaKnown RBP0.74□□□□□ -2.29
HIF1A-212ENST00000557538 CSMD2Q7Z408 3487 aa0.74□□□□□ -2.29
HIF1A-212ENST00000557538 MUC2Q02817 5179 aa0.74□□□□□ -2.29
HIF1A-212ENST00000557538 DNAJC13O75165 2243 aa0.74□□□□□ -2.29
HIF1A-212ENST00000557538 CADP27708 2225 aa0.74□□□□□ -2.29
HIF1A-212ENST00000557538 HECTD4Q9Y4D8 3996 aa0.74□□□□□ -2.29
HIF1A-212ENST00000557538 HAMPP81172 84 aa0.74□□□□□ -2.29
HIF1A-212ENST00000557538 CDKN2A-AS1Q9UH64 79 aa0.74□□□□□ -2.29
HIF1A-212ENST00000557538 ZZEF1O43149 2961 aa0.73□□□□□ -2.29
HIF1A-212ENST00000557538 H3BRN7 92 aa0.73□□□□□ -2.29
HIF1A-212ENST00000557538 INE1O15225 51 aa0.73□□□□□ -2.29
HIF1A-212ENST00000557538 CCL19Q99731 98 aa0.73□□□□□ -2.29
HIF1A-212ENST00000557538 CACNA1DQ01668 2161 aa0.73□□□□□ -2.29
HIF1A-212ENST00000557538 FREM2Q5SZK8 3169 aa0.73□□□□□ -2.29
HIF1A-212ENST00000557538 FLNBO75369 2602 aaKnown RBP0.73□□□□□ -2.29
HIF1A-212ENST00000557538 COX17Q14061 63 aa0.73□□□□□ -2.29
HIF1A-212ENST00000557538 Q6ZRN7 208 aaPredicted RBP0.73□□□□□ -2.29
HIF1A-212ENST00000557538 DEFB106AQ8N104 65 aa0.73□□□□□ -2.29
HIF1A-212ENST00000557538 FAM208BQ5VWN6 2430 aa0.73□□□□□ -2.29
HIF1A-212ENST00000557538 SDK2Q58EX2 2172 aa0.73□□□□□ -2.29
HIF1A-212ENST00000557538 DYNC2H1Q8NCM8 4307 aaKnown RBP0.73□□□□□ -2.29
HIF1A-212ENST00000557538 FRYQ5TBA9 3013 aa0.73□□□□□ -2.29
HIF1A-212ENST00000557538 NAV3Q8IVL0 2385 aa0.73□□□□□ -2.29
HIF1A-212ENST00000557538 K7EQZ3 153 aa0.73□□□□□ -2.29
HIF1A-212ENST00000557538 ANGP03950 147 aaKnown RBP0.73□□□□□ -2.29
HIF1A-212ENST00000557538 COX6A2Q02221 97 aa0.73□□□□□ -2.29
HIF1A-212ENST00000557538 KLK9Q2XQG4 91 aa0.73□□□□□ -2.29
HIF1A-212ENST00000557538 SPINK9Q5DT21 86 aa0.73□□□□□ -2.29
HIF1A-212ENST00000557538 C10orf99Q6UWK7 81 aa0.73□□□□□ -2.29
HIF1A-212ENST00000557538 HSPG2P98160 4391 aa0.73□□□□□ -2.29
HIF1A-212ENST00000557538 DEFB134Q4QY38 66 aa0.72□□□□□ -2.29
HIF1A-212ENST00000557538 KRTAP5-7Q6L8G8 165 aa0.72□□□□□ -2.29
HIF1A-212ENST00000557538 KRTAP13-1Q8IUC0 172 aa0.72□□□□□ -2.29
HIF1A-212ENST00000557538 DNAH3Q8TD57 4116 aa0.72□□□□□ -2.29
HIF1A-212ENST00000557538 HECTD1Q9ULT8 2610 aa0.72□□□□□ -2.29
HIF1A-212ENST00000557538 A0A1B0GU69 56 aa0.72□□□□□ -2.29
HIF1A-212ENST00000557538 M0QY20 66 aa0.72□□□□□ -2.29
HIF1A-212ENST00000557538 Q6ZSA8 131 aa0.72□□□□□ -2.29
HIF1A-212ENST00000557538 FN1P02751 2386 aaKnown RBP0.72□□□□□ -2.29
HIF1A-212ENST00000557538 TECTAO75443 2155 aa0.72□□□□□ -2.29
HIF1A-212ENST00000557538 MAP1BP46821 2468 aaKnown RBP0.72□□□□□ -2.29
HIF1A-212ENST00000557538 SACSQ9NZJ4 4579 aa0.72□□□□□ -2.29
HIF1A-212ENST00000557538 ZFHX2Q9C0A1 2572 aaPredicted RBP0.72□□□□□ -2.29
HIF1A-212ENST00000557538 RPL37AP61513 92 aaKnown RBP0.72□□□□□ -2.29
HIF1A-212ENST00000557538 C10orf55Q5SWW7 151 aa0.72□□□□□ -2.29
HIF1A-212ENST00000557538 PRUNE2Q8WUY3 3088 aa0.72□□□□□ -2.29
HIF1A-212ENST00000557538 KNTC1P50748 2209 aa0.71□□□□□ -2.29
HIF1A-212ENST00000557538 KRTAP12-4P60329 112 aa0.71□□□□□ -2.3
HIF1A-212ENST00000557538 TRANK1O15050 2925 aa0.71□□□□□ -2.3
HIF1A-212ENST00000557538 SPTBN4Q9H254 2564 aa0.71□□□□□ -2.3
HIF1A-212ENST00000557538 PDZD2O15018 2839 aa0.71□□□□□ -2.3
HIF1A-212ENST00000557538 GVQW2A0A096LPI5 108 aaPredicted RBP0.71□□□□□ -2.3
HIF1A-212ENST00000557538 WT1-ASQ06250 92 aa0.71□□□□□ -2.3
HIF1A-212ENST00000557538 ANKRD11Q6UB99 2663 aaPredicted RBP0.71□□□□□ -2.3
HIF1A-212ENST00000557538 PRRC2BQ5JSZ5 2229 aaKnown RBP0.71□□□□□ -2.3
HIF1A-212ENST00000557538 PCNX1Q96RV3 2341 aa0.71□□□□□ -2.3
HIF1A-212ENST00000557538 Q6ZRX8 168 aa0.7□□□□□ -2.3
HIF1A-212ENST00000557538 C4orf3Q8WVX3 66 aa0.7□□□□□ -2.3
HIF1A-212ENST00000557538 BDP1A6H8Y1 2624 aa0.7□□□□□ -2.3
HIF1A-212ENST00000557538 DNAH17Q9UFH2 4485 aa0.7□□□□□ -2.3
HIF1A-212ENST00000557538 RP1P56715 2156 aa0.7□□□□□ -2.3
HIF1A-212ENST00000557538 CDH23Q9H251 3354 aa0.7□□□□□ -2.3
HIF1A-212ENST00000557538 HUWE1Q7Z6Z7 4374 aaKnown RBP0.7□□□□□ -2.3
HIF1A-212ENST00000557538 PRB1P04280 392 aa0.7□□□□□ -2.3
HIF1A-212ENST00000557538 F5P12259 2224 aa0.7□□□□□ -2.3
HIF1A-212ENST00000557538 KIAA0100Q14667 2235 aaKnown RBP0.7□□□□□ -2.3
HIF1A-212ENST00000557538 LAMA1P25391 3075 aa0.7□□□□□ -2.3
HIF1A-212ENST00000557538 MYO18BQ8IUG5 2567 aa0.7□□□□□ -2.3
HIF1A-212ENST00000557538 SONP18583 2426 aaKnown RBP0.7□□□□□ -2.3
HIF1A-212ENST00000557538 COL12A1Q99715 3063 aa0.7□□□□□ -2.3
HIF1A-212ENST00000557538 KALRNO60229 2985 aa0.7□□□□□ -2.3
HIF1A-212ENST00000557538 LAMA2P24043 3122 aaKnown RBP0.7□□□□□ -2.3
HIF1A-212ENST00000557538 CRYBG3Q68DQ2 2970 aa0.7□□□□□ -2.3
HIF1A-212ENST00000557538 STAB1Q9NY15 2570 aa0.7□□□□□ -2.3
HIF1A-212ENST00000557538 ATMQ13315 3056 aa0.7□□□□□ -2.3
HIF1A-212ENST00000557538 DNAH12Q6ZR08 3092 aa0.7□□□□□ -2.3
HIF1A-212ENST00000557538 BRD3OSQ6XYD6 125 aa0.69□□□□□ -2.3
HIF1A-212ENST00000557538 HTTP42858 3142 aa0.69□□□□□ -2.3
HIF1A-212ENST00000557538 TNCP24821 2201 aa0.69□□□□□ -2.3
HIF1A-212ENST00000557538 LRBAP50851 2863 aa0.69□□□□□ -2.3
HIF1A-212ENST00000557538 DNAH2Q9P225 4427 aa0.69□□□□□ -2.3
HIF1A-212ENST00000557538 DMXL1Q9Y485 3027 aa0.69□□□□□ -2.3
HIF1A-212ENST00000557538 ZFYVE26Q68DK2 2539 aa0.69□□□□□ -2.3
HIF1A-212ENST00000557538 MMP24-AS1A0A0U1RRL7 71 aa0.69□□□□□ -2.3
HIF1A-212ENST00000557538 LYNX1P0DP58 116 aa0.69□□□□□ -2.3
HIF1A-212ENST00000557538 DEFB123Q8N688 67 aa0.69□□□□□ -2.3
HIF1A-212ENST00000557538 PLAC4Q8WY50 150 aa0.69□□□□□ -2.3
HIF1A-212ENST00000557538 LEAP2Q969E1 77 aa0.69□□□□□ -2.3
HIF1A-212ENST00000557538 GOLGA4Q13439 2230 aaKnown RBP0.69□□□□□ -2.3
HIF1A-212ENST00000557538 PIEZO2Q9H5I5 2752 aa0.69□□□□□ -2.3
HIF1A-212ENST00000557538 DMXL2Q8TDJ6 3036 aa0.69□□□□□ -2.3
HIF1A-212ENST00000557538 K7EIM0 57 aa0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms