RNA–Protein interactions for RNA: ENST00000557024.1

SYNE2-224, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 998 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-224ENST00000557024 PSMB2P49721 201 aa5.44□□□□□ -1.54
SYNE2-224ENST00000557024 FAM19A1Q7Z5A9 133 aa5.44□□□□□ -1.54
SYNE2-224ENST00000557024 SMIM11BQ8TCY0 68 aa5.44□□□□□ -1.54
SYNE2-224ENST00000557024 COX6CP09669 75 aa5.43□□□□□ -1.54
SYNE2-224ENST00000557024 LINC01547P58512 204 aaPredicted RBP5.43□□□□□ -1.54
SYNE2-224ENST00000557024 TPRXLQ17RH7 258 aa5.43□□□□□ -1.54
SYNE2-224ENST00000557024 C6orf99Q4VX62 202 aa5.43□□□□□ -1.54
SYNE2-224ENST00000557024 SNHG12Q9BXW3 62 aa5.43□□□□□ -1.54
SYNE2-224ENST00000557024 BCE1O60756 84 aa5.42□□□□□ -1.54
SYNE2-224ENST00000557024 SNCGO76070 127 aa5.42□□□□□ -1.54
SYNE2-224ENST00000557024 SCGB1C2P0DMR2 95 aa5.42□□□□□ -1.54
SYNE2-224ENST00000557024 COX7BP24311 80 aa5.42□□□□□ -1.54
SYNE2-224ENST00000557024 KRTAP15-1Q3LI76 137 aa5.42□□□□□ -1.54
SYNE2-224ENST00000557024 TYMSOSQ8TAI1 123 aa5.42□□□□□ -1.54
SYNE2-224ENST00000557024 MUC17Q685J3 4493 aa5.41□□□□□ -1.54
SYNE2-224ENST00000557024 IGLV7-46A0A075B6I9 117 aa5.41□□□□□ -1.54
SYNE2-224ENST00000557024 ZNF861PO60384 105 aa5.41□□□□□ -1.54
SYNE2-224ENST00000557024 RPL28P46779 137 aaKnown RBP5.41□□□□□ -1.54
SYNE2-224ENST00000557024 COL5A1-AS1Q5SY13 56 aa5.41□□□□□ -1.54
SYNE2-224ENST00000557024 SLC25A20O43772 301 aa5.4□□□□□ -1.54
SYNE2-224ENST00000557024 TRBV7-6A0A0J9YX20 115 aa5.39□□□□□ -1.55
SYNE2-224ENST00000557024 H0YGX0 51 aa5.39□□□□□ -1.55
SYNE2-224ENST00000557024 CRYGAP11844 174 aa5.39□□□□□ -1.55
SYNE2-224ENST00000557024 SPRR1AP35321 89 aa5.39□□□□□ -1.55
SYNE2-224ENST00000557024 PRLHP81277 87 aa5.39□□□□□ -1.55
SYNE2-224ENST00000557024 LYRM7Q5U5X0 104 aa5.39□□□□□ -1.55
SYNE2-224ENST00000557024 KRTAP5-3Q6L8H2 238 aa5.39□□□□□ -1.55
SYNE2-224ENST00000557024 H3BUT2 72 aa5.38□□□□□ -1.55
SYNE2-224ENST00000557024 Q6ZRX8 168 aa5.38□□□□□ -1.55
SYNE2-224ENST00000557024 HIGD2AQ9BW72 106 aa5.38□□□□□ -1.55
SYNE2-224ENST00000557024 ANAPC11Q9NYG5 84 aa5.38□□□□□ -1.55
SYNE2-224ENST00000557024 ELOF1P60002 83 aaKnown RBP5.37□□□□□ -1.55
SYNE2-224ENST00000557024 NAA38Q9BRA0 125 aaKnown RBP5.37□□□□□ -1.55
SYNE2-224ENST00000557024 DHRS4-AS1Q9P1J3 65 aa5.37□□□□□ -1.55
SYNE2-224ENST00000557024 KRTAP4-16G5E9R7 235 aaPredicted RBP5.36□□□□□ -1.55
SYNE2-224ENST00000557024 TAX1BP3O14907 124 aa5.36□□□□□ -1.55
SYNE2-224ENST00000557024 KRTAP13-2Q52LG2 175 aa5.36□□□□□ -1.55
SYNE2-224ENST00000557024 LINC00304Q8N9R0 145 aa5.36□□□□□ -1.55
SYNE2-224ENST00000557024 hADV29S1A0JD25 119 aa5.35□□□□□ -1.55
SYNE2-224ENST00000557024 SMCR5Q8TEV8 140 aa5.35□□□□□ -1.55
SYNE2-224ENST00000557024 KRTAP4-1Q9BYQ7 146 aa5.35□□□□□ -1.55
SYNE2-224ENST00000557024 DNAL4O96015 105 aa5.34□□□□□ -1.55
SYNE2-224ENST00000557024 FABP2P12104 132 aa5.34□□□□□ -1.55
SYNE2-224ENST00000557024 LINC00575Q6W349 94 aa5.34□□□□□ -1.55
SYNE2-224ENST00000557024 CLEC2BQ92478 149 aa5.34□□□□□ -1.55
SYNE2-224ENST00000557024 A0A1B0GX51 115 aa5.33□□□□□ -1.56
SYNE2-224ENST00000557024 A0A1W2PPM0 123 aa5.33□□□□□ -1.56
SYNE2-224ENST00000557024 ATXN8Q156A1 80 aa5.33□□□□□ -1.56
SYNE2-224ENST00000557024 Q9BRP9 147 aa5.33□□□□□ -1.56
SYNE2-224ENST00000557024 ZNF706Q9Y5V0 76 aaPredicted RBP5.33□□□□□ -1.56
SYNE2-224ENST00000557024 TRBV20-1A0A075B6N2 111 aa5.32□□□□□ -1.56
SYNE2-224ENST00000557024 ASB16-AS1Q495Z4 193 aa5.32□□□□□ -1.56
SYNE2-224ENST00000557024 KRTAP13-1Q8IUC0 172 aa5.32□□□□□ -1.56
SYNE2-224ENST00000557024 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.31□□□□□ -1.56
SYNE2-224ENST00000557024 DEFB105AQ8NG35 78 aa5.31□□□□□ -1.56
SYNE2-224ENST00000557024 FAM218AQ96MZ4 157 aa5.31□□□□□ -1.56
SYNE2-224ENST00000557024 LST1O00453 97 aa5.3□□□□□ -1.56
SYNE2-224ENST00000557024 ERC2-IT1O76042 136 aa5.3□□□□□ -1.56
SYNE2-224ENST00000557024 TCL1BO95988 128 aa5.3□□□□□ -1.56
SYNE2-224ENST00000557024 TRACP01848 142 aa5.3□□□□□ -1.56
SYNE2-224ENST00000557024 GAGE2AQ6NT46 116 aa5.3□□□□□ -1.56
SYNE2-224ENST00000557024 Q6ZQY7 126 aa5.3□□□□□ -1.56
SYNE2-224ENST00000557024 SPCS1Q9Y6A9 102 aa5.3□□□□□ -1.56
SYNE2-224ENST00000557024 OCIAD2Q56VL3 154 aa5.29□□□□□ -1.56
SYNE2-224ENST00000557024 ORMDL1Q9P0S3 153 aa5.29□□□□□ -1.56
SYNE2-224ENST00000557024 TEX49A0A1B0GTD5 131 aa5.28□□□□□ -1.56
SYNE2-224ENST00000557024 H3BQ85 93 aa5.28□□□□□ -1.56
SYNE2-224ENST00000557024 FAM229BQ4G0N7 80 aa5.28□□□□□ -1.56
SYNE2-224ENST00000557024 GTF2H5Q6ZYL4 71 aa5.28□□□□□ -1.56
SYNE2-224ENST00000557024 ST20-AS1Q8NBB2 130 aa5.28□□□□□ -1.56
SYNE2-224ENST00000557024 SPRR4Q96PI1 79 aa5.28□□□□□ -1.56
SYNE2-224ENST00000557024 SEC61BP60468 96 aaKnown RBP5.27□□□□□ -1.57
SYNE2-224ENST00000557024 KRTAP13-3Q3SY46 172 aa5.27□□□□□ -1.57
SYNE2-224ENST00000557024 LAMTOR3Q9UHA4 124 aa5.27□□□□□ -1.57
SYNE2-224ENST00000557024 F8WEM9 126 aa5.26□□□□□ -1.57
SYNE2-224ENST00000557024 C9JAW5 83 aa5.25□□□□□ -1.57
SYNE2-224ENST00000557024 H3BMG7 143 aa5.25□□□□□ -1.57
SYNE2-224ENST00000557024 K7EP34 96 aa5.25□□□□□ -1.57
SYNE2-224ENST00000557024 TMEM256-PLSCR3K7ERE1 68 aa5.25□□□□□ -1.57
SYNE2-224ENST00000557024 BAALC-AS2P0C853 105 aa5.25□□□□□ -1.57
SYNE2-224ENST00000557024 MT1HP80294 61 aa5.25□□□□□ -1.57
SYNE2-224ENST00000557024 FP248Q71RG6 208 aaPredicted RBP5.25□□□□□ -1.57
SYNE2-224ENST00000557024 PPDPFLQ8WWR9 84 aa5.25□□□□□ -1.57
SYNE2-224ENST00000557024 C9orf153Q5TBE3 101 aa5.24□□□□□ -1.57
SYNE2-224ENST00000557024 Q8N377 158 aa5.24□□□□□ -1.57
SYNE2-224ENST00000557024 MPLKIPQ8TAP9 179 aa5.24□□□□□ -1.57
SYNE2-224ENST00000557024 IGLV5-48A0A075B6I7 105 aa5.23□□□□□ -1.57
SYNE2-224ENST00000557024 IGLV9-49A0A0B4J1Y8 123 aa5.23□□□□□ -1.57
SYNE2-224ENST00000557024 SPRR1BP22528 89 aa5.23□□□□□ -1.57
SYNE2-224ENST00000557024 C3orf22Q8N5N4 141 aa5.23□□□□□ -1.57
SYNE2-224ENST00000557024 A0A1B0GV90 55 aa5.22□□□□□ -1.57
SYNE2-224ENST00000557024 LINC00483Q53H64 154 aa5.22□□□□□ -1.57
SYNE2-224ENST00000557024 KRTAP9-8Q9BYQ0 159 aa5.22□□□□□ -1.57
SYNE2-224ENST00000557024 H3BT86 120 aa5.21□□□□□ -1.58
SYNE2-224ENST00000557024 NDUFV3P56181 108 aaKnown RBP5.21□□□□□ -1.58
SYNE2-224ENST00000557024 UBE2V1Q13404 147 aa5.21□□□□□ -1.58
SYNE2-224ENST00000557024 KRTAP19-2Q3LHN2 52 aa5.21□□□□□ -1.58
SYNE2-224ENST00000557024 MTURNQ8N3F0 131 aa5.21□□□□□ -1.58
SYNE2-224ENST00000557024 KRTAP10-6P60371 365 aaPredicted RBP5.2□□□□□ -1.58
SYNE2-224ENST00000557024 MOBPQ13875 183 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms