RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 Q8NDZ9 215 aa2.54□□□□□ -2
HIF1A-209ENST00000556827 TRBV10-2A0A0K0K1G8 114 aa2.53□□□□□ -2
HIF1A-209ENST00000556827 BPY2O14599 106 aa2.53□□□□□ -2
HIF1A-209ENST00000556827 PMCHL1Q16048 86 aa2.53□□□□□ -2
HIF1A-209ENST00000556827 PCOTHQ58A44 107 aa2.53□□□□□ -2
HIF1A-209ENST00000556827 COX6B2Q6YFQ2 88 aa2.53□□□□□ -2
HIF1A-209ENST00000556827 Q6ZRX8 168 aa2.53□□□□□ -2
HIF1A-209ENST00000556827 KRTAP4-1Q9BYQ7 146 aa2.53□□□□□ -2
HIF1A-209ENST00000556827 SPANXB1Q9NS25 103 aaPredicted RBP2.53□□□□□ -2
HIF1A-209ENST00000556827 TRAPPC1Q9Y5R8 145 aa2.53□□□□□ -2
HIF1A-209ENST00000556827 TRAV12-1A0A0B4J245 112 aa2.52□□□□□ -2.01
HIF1A-209ENST00000556827 TMEM218A2RU14 115 aa2.52□□□□□ -2.01
HIF1A-209ENST00000556827 A8MUU9 505 aa2.52□□□□□ -2.01
HIF1A-209ENST00000556827 C18orf32Q8TCD1 76 aa2.52□□□□□ -2.01
HIF1A-209ENST00000556827 IFI27L1Q96BM0 104 aa2.52□□□□□ -2.01
HIF1A-209ENST00000556827 LAMTOR3Q9UHA4 124 aa2.52□□□□□ -2.01
HIF1A-209ENST00000556827 TRAV23DV6A0A075B6W5 121 aa2.51□□□□□ -2.01
HIF1A-209ENST00000556827 C9orf92A6NGG3 77 aa2.51□□□□□ -2.01
HIF1A-209ENST00000556827 H0Y8G0 127 aa2.51□□□□□ -2.01
HIF1A-209ENST00000556827 ZNF73O43830 326 aaPredicted RBP2.51□□□□□ -2.01
HIF1A-209ENST00000556827 ERC2-IT1O76042 136 aa2.51□□□□□ -2.01
HIF1A-209ENST00000556827 LGALS3P17931 250 aaKnown RBP2.51□□□□□ -2.01
HIF1A-209ENST00000556827 RHEBQ15382 184 aa2.51□□□□□ -2.01
HIF1A-209ENST00000556827 HRCT1Q6UXD1 115 aa2.51□□□□□ -2.01
HIF1A-209ENST00000556827 CHCHD1Q96BP2 118 aaKnown RBP2.51□□□□□ -2.01
HIF1A-209ENST00000556827 H7C2G1 150 aa2.5□□□□□ -2.01
HIF1A-209ENST00000556827 LEPROTO15243 131 aa2.5□□□□□ -2.01
HIF1A-209ENST00000556827 NDUFC2O95298 119 aa2.5□□□□□ -2.01
HIF1A-209ENST00000556827 IGLV6-57P01721 117 aa2.5□□□□□ -2.01
HIF1A-209ENST00000556827 PLNP26678 52 aa2.5□□□□□ -2.01
HIF1A-209ENST00000556827 MT1HP80294 61 aa2.5□□□□□ -2.01
HIF1A-209ENST00000556827 TAL2Q16559 108 aa2.5□□□□□ -2.01
HIF1A-209ENST00000556827 CLLU1Q5K131 121 aa2.5□□□□□ -2.01
HIF1A-209ENST00000556827 OR13C6PQ8NH95 151 aa2.5□□□□□ -2.01
HIF1A-209ENST00000556827 Q9BRP9 147 aa2.5□□□□□ -2.01
HIF1A-209ENST00000556827 LOC107984156A0A0G2JMH3 177 aa2.49□□□□□ -2.01
HIF1A-209ENST00000556827 J3QQQ9 107 aa2.49□□□□□ -2.01
HIF1A-209ENST00000556827 HSBP1O75506 76 aa2.49□□□□□ -2.01
HIF1A-209ENST00000556827 CD164Q04900 197 aa2.49□□□□□ -2.01
HIF1A-209ENST00000556827 NDUFA5Q16718 116 aa2.49□□□□□ -2.01
HIF1A-209ENST00000556827 ARL17AQ8IVW1 177 aa2.49□□□□□ -2.01
HIF1A-209ENST00000556827 ST20-AS1Q8NBB2 130 aa2.49□□□□□ -2.01
HIF1A-209ENST00000556827 PRO1933Q9H354 126 aa2.49□□□□□ -2.01
HIF1A-209ENST00000556827 AKR1D1P51857 326 aa2.48□□□□□ -2.01
HIF1A-209ENST00000556827 DEFB105AQ8NG35 78 aa2.48□□□□□ -2.01
HIF1A-209ENST00000556827 HSPB8Q9UJY1 196 aa2.48□□□□□ -2.01
HIF1A-209ENST00000556827 TEX49A0A1B0GTD5 131 aa2.47□□□□□ -2.01
HIF1A-209ENST00000556827 DPM2O94777 84 aa2.47□□□□□ -2.01
HIF1A-209ENST00000556827 LEPROTL1O95214 131 aa2.47□□□□□ -2.01
HIF1A-209ENST00000556827 TCL1BO95988 128 aa2.47□□□□□ -2.01
HIF1A-209ENST00000556827 SPRR1BP22528 89 aa2.47□□□□□ -2.01
HIF1A-209ENST00000556827 NPC2P61916 151 aa2.47□□□□□ -2.01
HIF1A-209ENST00000556827 Q6Q795 121 aa2.47□□□□□ -2.01
HIF1A-209ENST00000556827 C8orf17Q9NRJ1 99 aa2.47□□□□□ -2.01
HIF1A-209ENST00000556827 IGKCP01834 107 aa2.46□□□□□ -2.02
HIF1A-209ENST00000556827 APOC3P02656 99 aa2.46□□□□□ -2.02
HIF1A-209ENST00000556827 COX7BP24311 80 aa2.46□□□□□ -2.02
HIF1A-209ENST00000556827 ATP11AUNQ6ZP68 121 aa2.46□□□□□ -2.02
HIF1A-209ENST00000556827 SVBPQ8N300 66 aa2.46□□□□□ -2.02
HIF1A-209ENST00000556827 SPANXDQ9BXN6 97 aa2.46□□□□□ -2.02
HIF1A-209ENST00000556827 SPANXCQ9NY87 97 aa2.46□□□□□ -2.02
HIF1A-209ENST00000556827 FABP4P15090 132 aa2.45□□□□□ -2.02
HIF1A-209ENST00000556827 TSPEAR-AS2P59090 65 aa2.45□□□□□ -2.02
HIF1A-209ENST00000556827 RPL37P61927 97 aaKnown RBP2.45□□□□□ -2.02
HIF1A-209ENST00000556827 KRTAP19-2Q3LHN2 52 aa2.45□□□□□ -2.02
HIF1A-209ENST00000556827 Q5XG85 94 aa2.45□□□□□ -2.02
HIF1A-209ENST00000556827 COPS9Q8WXC6 57 aa2.45□□□□□ -2.02
HIF1A-209ENST00000556827 FAT4Q6V0I7 4981 aa2.44□□□□□ -2.02
HIF1A-209ENST00000556827 SMIM26A0A096LP01 95 aa2.44□□□□□ -2.02
HIF1A-209ENST00000556827 TRBV7-6A0A0J9YX20 115 aa2.44□□□□□ -2.02
HIF1A-209ENST00000556827 F8WEM9 126 aa2.44□□□□□ -2.02
HIF1A-209ENST00000556827 ELOF1P60002 83 aaKnown RBP2.44□□□□□ -2.02
HIF1A-209ENST00000556827 C10orf91Q5T1B1 145 aa2.44□□□□□ -2.02
HIF1A-209ENST00000556827 C1orf195Q5TG92 126 aa2.44□□□□□ -2.02
HIF1A-209ENST00000556827 NHP2Q9NX24 153 aaKnown RBP2.44□□□□□ -2.02
HIF1A-209ENST00000556827 FSIP2Q5CZC0 6907 aa2.44□□□□□ -2.02
HIF1A-209ENST00000556827 TRBV20-1A0A075B6N2 111 aa2.43□□□□□ -2.02
HIF1A-209ENST00000556827 A6NDN8 102 aa2.43□□□□□ -2.02
HIF1A-209ENST00000556827 TIMM17BO60830 172 aa2.43□□□□□ -2.02
HIF1A-209ENST00000556827 C6orf99Q4VX62 202 aa2.43□□□□□ -2.02
HIF1A-209ENST00000556827 SOSTDC1Q6X4U4 206 aa2.43□□□□□ -2.02
HIF1A-209ENST00000556827 LINC00308Q8TCZ7 52 aa2.43□□□□□ -2.02
HIF1A-209ENST00000556827 PMCHL2Q9BQD1 86 aa2.43□□□□□ -2.02
HIF1A-209ENST00000556827 C20orf202A1L168 122 aa2.42□□□□□ -2.02
HIF1A-209ENST00000556827 VAMP3Q15836 100 aa2.42□□□□□ -2.02
HIF1A-209ENST00000556827 SCGB1D4Q6XE38 83 aa2.42□□□□□ -2.02
HIF1A-209ENST00000556827 ZNF815PA8K554 130 aa2.41□□□□□ -2.02
HIF1A-209ENST00000556827 TRGC2P03986 189 aa2.41□□□□□ -2.02
HIF1A-209ENST00000556827 IGKV4-1P06312 121 aa2.41□□□□□ -2.02
HIF1A-209ENST00000556827 Q6JHZ5 121 aa2.41□□□□□ -2.02
HIF1A-209ENST00000556827 SLC7A5P1Q8MH63 180 aa2.41□□□□□ -2.02
HIF1A-209ENST00000556827 OBSCN-AS1Q96MR7 158 aa2.41□□□□□ -2.02
HIF1A-209ENST00000556827 HMCN1Q96RW7 5635 aa2.41□□□□□ -2.02
HIF1A-209ENST00000556827 IGLV5-48A0A075B6I7 105 aa2.4□□□□□ -2.03
HIF1A-209ENST00000556827 IFITM1P13164 125 aa2.4□□□□□ -2.03
HIF1A-209ENST00000556827 TRAV13-2A0A0B4J235 113 aa2.39□□□□□ -2.03
HIF1A-209ENST00000556827 A0A0G2JQZ4 141 aa2.39□□□□□ -2.03
HIF1A-209ENST00000556827 SYS1-DBNDD2H3BUS1 97 aa2.39□□□□□ -2.03
HIF1A-209ENST00000556827 Q96NJ1 140 aa2.39□□□□□ -2.03
HIF1A-209ENST00000556827 LINC00846Q9NV44 126 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms