RNA–Protein interactions for RNA: ENST00000556264.1

SPTLC2-204, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 263 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-204ENST00000556264 Q6ZQT0 140 aa1.86□□□□□ -2.11
SPTLC2-204ENST00000556264 Q6ZQY7 126 aa1.86□□□□□ -2.11
SPTLC2-204ENST00000556264 C20orf197Q8N268 126 aa1.86□□□□□ -2.11
SPTLC2-204ENST00000556264 WFDC9Q8NEX5 89 aa1.86□□□□□ -2.11
SPTLC2-204ENST00000556264 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.86□□□□□ -2.11
SPTLC2-204ENST00000556264 BSNQ9UPA5 3926 aa1.86□□□□□ -2.11
SPTLC2-204ENST00000556264 ASPMQ8IZT6 3477 aa1.86□□□□□ -2.11
SPTLC2-204ENST00000556264 LOC107984640A0A0U1RRK4 108 aa1.85□□□□□ -2.11
SPTLC2-204ENST00000556264 NDUFC1O43677 76 aa1.85□□□□□ -2.11
SPTLC2-204ENST00000556264 DPH3Q96FX2 82 aa1.85□□□□□ -2.11
SPTLC2-204ENST00000556264 BAHCC1Q9P281 2608 aa1.85□□□□□ -2.11
SPTLC2-204ENST00000556264 CR1P17927 2039 aa1.84□□□□□ -2.11
SPTLC2-204ENST00000556264 DOPEY1Q5JWR5 2465 aa1.84□□□□□ -2.11
SPTLC2-204ENST00000556264 ETDCA0A1B0GVM5 59 aa1.84□□□□□ -2.11
SPTLC2-204ENST00000556264 H3BNG1 76 aa1.84□□□□□ -2.11
SPTLC2-204ENST00000556264 ATP5EP56381 51 aaPredicted RBP1.84□□□□□ -2.11
SPTLC2-204ENST00000556264 ELOF1P60002 83 aaKnown RBP1.84□□□□□ -2.11
SPTLC2-204ENST00000556264 DEFB105AQ8NG35 78 aa1.84□□□□□ -2.11
SPTLC2-204ENST00000556264 ZCCHC13Q8WW36 166 aaKnown RBP1.84□□□□□ -2.11
SPTLC2-204ENST00000556264 SMR3AQ99954 134 aa1.84□□□□□ -2.11
SPTLC2-204ENST00000556264 C6orf48Q9UBA6 75 aa1.84□□□□□ -2.11
SPTLC2-204ENST00000556264 SERP1Q9Y6X1 66 aa1.84□□□□□ -2.11
SPTLC2-204ENST00000556264 SORL1Q92673 2214 aa1.84□□□□□ -2.11
SPTLC2-204ENST00000556264 LAMA5O15230 3695 aa1.84□□□□□ -2.12
SPTLC2-204ENST00000556264 DCHS1Q96JQ0 3298 aa1.84□□□□□ -2.12
SPTLC2-204ENST00000556264 CSPG4Q6UVK1 2322 aa1.84□□□□□ -2.12
SPTLC2-204ENST00000556264 NCOR2Q9Y618 2525 aa1.83□□□□□ -2.12
SPTLC2-204ENST00000556264 ANKRD17O75179 2603 aaKnown RBP1.83□□□□□ -2.12
SPTLC2-204ENST00000556264 F8WEM9 126 aa1.83□□□□□ -2.12
SPTLC2-204ENST00000556264 LINC01554Q52M75 96 aa1.83□□□□□ -2.12
SPTLC2-204ENST00000556264 LCA10Q71F78 164 aa1.83□□□□□ -2.12
SPTLC2-204ENST00000556264 SPACA4Q8TDM5 124 aa1.83□□□□□ -2.12
SPTLC2-204ENST00000556264 CREBBPQ92793 2442 aa1.83□□□□□ -2.12
SPTLC2-204ENST00000556264 SPG11Q96JI7 2443 aa1.83□□□□□ -2.12
SPTLC2-204ENST00000556264 ITPR1Q14643 2758 aa1.83□□□□□ -2.12
SPTLC2-204ENST00000556264 CHD8Q9HCK8 2581 aa1.83□□□□□ -2.12
SPTLC2-204ENST00000556264 HMCN1Q96RW7 5635 aa1.83□□□□□ -2.12
SPTLC2-204ENST00000556264 DEFB131BA0A096LNP1 70 aa1.82□□□□□ -2.12
SPTLC2-204ENST00000556264 TRAV10A0A0B4J240 114 aa1.82□□□□□ -2.12
SPTLC2-204ENST00000556264 TRBV7-4A0A0J9YYF1 115 aa1.82□□□□□ -2.12
SPTLC2-204ENST00000556264 LINC01556Q5JQF7 62 aa1.82□□□□□ -2.12
SPTLC2-204ENST00000556264 WFDC10BQ8IUB3 73 aa1.82□□□□□ -2.12
SPTLC2-204ENST00000556264 SNURFQ9Y675 71 aa1.82□□□□□ -2.12
SPTLC2-204ENST00000556264 NAV2Q8IVL1 2488 aa1.82□□□□□ -2.12
SPTLC2-204ENST00000556264 ASH1LQ9NR48 2969 aaKnown RBP1.82□□□□□ -2.12
SPTLC2-204ENST00000556264 CELSR1Q9NYQ6 3014 aa1.82□□□□□ -2.12
SPTLC2-204ENST00000556264 CSMD1Q96PZ7 3565 aa1.82□□□□□ -2.12
SPTLC2-204ENST00000556264 SPTBN4Q9H254 2564 aa1.81□□□□□ -2.12
SPTLC2-204ENST00000556264 M0R2N4 97 aa1.81□□□□□ -2.12
SPTLC2-204ENST00000556264 ERC2-IT1O76042 136 aa1.81□□□□□ -2.12
SPTLC2-204ENST00000556264 UBE2BP63146 152 aa1.81□□□□□ -2.12
SPTLC2-204ENST00000556264 KLKP1Q107X0 134 aa1.81□□□□□ -2.12
SPTLC2-204ENST00000556264 ESRGQ1W209 222 aa1.81□□□□□ -2.12
SPTLC2-204ENST00000556264 KRTAP6-3Q3LI67 103 aa1.81□□□□□ -2.12
SPTLC2-204ENST00000556264 HRCT1Q6UXD1 115 aa1.81□□□□□ -2.12
SPTLC2-204ENST00000556264 TMEM254Q8TBM7 123 aa1.81□□□□□ -2.12
SPTLC2-204ENST00000556264 CYSTM1Q9H1C7 97 aa1.81□□□□□ -2.12
SPTLC2-204ENST00000556264 FAM208BQ5VWN6 2430 aa1.8□□□□□ -2.12
SPTLC2-204ENST00000556264 MYO18BQ8IUG5 2567 aa1.8□□□□□ -2.12
SPTLC2-204ENST00000556264 H7BZZ5 65 aa1.8□□□□□ -2.12
SPTLC2-204ENST00000556264 C1orf137Q5JT78 98 aa1.8□□□□□ -2.12
SPTLC2-204ENST00000556264 C7orf65Q6ZTY9 151 aa1.8□□□□□ -2.12
SPTLC2-204ENST00000556264 KCNQ1DNQ9H478 68 aa1.8□□□□□ -2.12
SPTLC2-204ENST00000556264 ZNF462Q96JM2 2506 aa1.8□□□□□ -2.12
SPTLC2-204ENST00000556264 USP9XQ93008 2570 aaPredicted RBP1.8□□□□□ -2.12
SPTLC2-204ENST00000556264 IGSF10Q6WRI0 2623 aa1.8□□□□□ -2.12
SPTLC2-204ENST00000556264 HIVEP2P31629 2446 aa1.79□□□□□ -2.12
SPTLC2-204ENST00000556264 ACACBO00763 2458 aa1.79□□□□□ -2.12
SPTLC2-204ENST00000556264 USP9YO00507 2555 aaPredicted RBP1.79□□□□□ -2.12
SPTLC2-204ENST00000556264 UTP20O75691 2785 aaKnown RBP1.79□□□□□ -2.12
SPTLC2-204ENST00000556264 RELNP78509 3460 aa1.79□□□□□ -2.12
SPTLC2-204ENST00000556264 KRTAP26-1Q6PEX3 210 aa1.79□□□□□ -2.12
SPTLC2-204ENST00000556264 Q6ZRX8 168 aa1.79□□□□□ -2.12
SPTLC2-204ENST00000556264 WNK1Q9H4A3 2382 aa1.79□□□□□ -2.12
SPTLC2-204ENST00000556264 POLQO75417 2590 aa1.79□□□□□ -2.12
SPTLC2-204ENST00000556264 CHD6Q8TD26 2715 aa1.79□□□□□ -2.12
SPTLC2-204ENST00000556264 MAP1AP78559 2803 aaPredicted RBP1.79□□□□□ -2.12
SPTLC2-204ENST00000556264 UBR5O95071 2799 aaPredicted RBP1.78□□□□□ -2.12
SPTLC2-204ENST00000556264 TEX15Q9BXT5 2789 aa1.78□□□□□ -2.12
SPTLC2-204ENST00000556264 FLNCQ14315 2725 aa1.78□□□□□ -2.12
SPTLC2-204ENST00000556264 CFAP46Q8IYW2 2715 aa1.78□□□□□ -2.12
SPTLC2-204ENST00000556264 IGLV5-48A0A075B6I7 105 aa1.78□□□□□ -2.12
SPTLC2-204ENST00000556264 NDUFB1O75438 58 aa1.78□□□□□ -2.12
SPTLC2-204ENST00000556264 Q5XG85 94 aa1.78□□□□□ -2.12
SPTLC2-204ENST00000556264 UBE2DNLQ8IWF7 75 aa1.78□□□□□ -2.12
SPTLC2-204ENST00000556264 COL12A1Q99715 3063 aa1.78□□□□□ -2.12
SPTLC2-204ENST00000556264 CRYBG3Q68DQ2 2970 aa1.78□□□□□ -2.12
SPTLC2-204ENST00000556264 MYO9AB2RTY4 2548 aa1.78□□□□□ -2.12
SPTLC2-204ENST00000556264 PIEZO1Q92508 2521 aa1.78□□□□□ -2.12
SPTLC2-204ENST00000556264 FBN2P35556 2912 aa1.77□□□□□ -2.13
SPTLC2-204ENST00000556264 CELSR2Q9HCU4 2923 aa1.77□□□□□ -2.13
SPTLC2-204ENST00000556264 MXRA5Q9NR99 2828 aa1.77□□□□□ -2.13
SPTLC2-204ENST00000556264 HCG22E2RYF7 251 aa1.77□□□□□ -2.13
SPTLC2-204ENST00000556264 KRTAP5-5Q701N2 237 aaPredicted RBP1.77□□□□□ -2.13
SPTLC2-204ENST00000556264 KRTAP13-1Q8IUC0 172 aa1.77□□□□□ -2.13
SPTLC2-204ENST00000556264 C9orf163Q8N9P6 203 aa1.77□□□□□ -2.13
SPTLC2-204ENST00000556264 BRK1Q8WUW1 75 aa1.77□□□□□ -2.13
SPTLC2-204ENST00000556264 LRRK2Q5S007 2527 aa1.77□□□□□ -2.13
SPTLC2-204ENST00000556264 TLN2Q9Y4G6 2542 aa1.77□□□□□ -2.13
SPTLC2-204ENST00000556264 ABCA12Q86UK0 2595 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms