RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 HSD52Q0P140 79 aa8.53□□□□□ -1.04
ACTN1-217ENST00000556203 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.53□□□□□ -1.04
ACTN1-217ENST00000556203 LIMD2Q9BT23 127 aa8.53□□□□□ -1.04
ACTN1-217ENST00000556203 UQCR10Q9UDW1 63 aa8.53□□□□□ -1.04
ACTN1-217ENST00000556203 PRO1854Q9UHT4 67 aa8.53□□□□□ -1.04
ACTN1-217ENST00000556203 F8WEM9 126 aa8.52□□□□□ -1.05
ACTN1-217ENST00000556203 CD164Q04900 197 aa8.52□□□□□ -1.05
ACTN1-217ENST00000556203 KRTAP13-3Q3SY46 172 aa8.51□□□□□ -1.05
ACTN1-217ENST00000556203 H0YGX0 51 aa8.5□□□□□ -1.05
ACTN1-217ENST00000556203 FAM218AQ96MZ4 157 aa8.49□□□□□ -1.05
ACTN1-217ENST00000556203 SNCGO76070 127 aa8.48□□□□□ -1.05
ACTN1-217ENST00000556203 K7ERJ3 54 aa8.47□□□□□ -1.05
ACTN1-217ENST00000556203 PPDPFLQ8WWR9 84 aa8.47□□□□□ -1.05
ACTN1-217ENST00000556203 TRIAP1O43715 76 aa8.46□□□□□ -1.06
ACTN1-217ENST00000556203 SNHG12Q9BXW3 62 aa8.46□□□□□ -1.06
ACTN1-217ENST00000556203 OCIAD2Q56VL3 154 aa8.45□□□□□ -1.06
ACTN1-217ENST00000556203 Q5XG85 94 aa8.45□□□□□ -1.06
ACTN1-217ENST00000556203 IGLV8-61A0A075B6I0 122 aa8.44□□□□□ -1.06
ACTN1-217ENST00000556203 Q6JHZ5 121 aa8.44□□□□□ -1.06
ACTN1-217ENST00000556203 MUC2Q02817 5179 aa8.43□□□□□ -1.06
ACTN1-217ENST00000556203 IGFL1Q6UW32 110 aa8.43□□□□□ -1.06
ACTN1-217ENST00000556203 MUC17Q685J3 4493 aa8.42□□□□□ -1.06
ACTN1-217ENST00000556203 A0A1B0GX51 115 aa8.42□□□□□ -1.06
ACTN1-217ENST00000556203 PSMB2P49721 201 aa8.42□□□□□ -1.06
ACTN1-217ENST00000556203 CLEC2BQ92478 149 aa8.42□□□□□ -1.06
ACTN1-217ENST00000556203 H3BUT2 72 aa8.41□□□□□ -1.06
ACTN1-217ENST00000556203 TCL1BO95988 128 aa8.39□□□□□ -1.07
ACTN1-217ENST00000556203 C1orf195Q5TG92 126 aa8.39□□□□□ -1.07
ACTN1-217ENST00000556203 TRBV7-7A0A0K0K1E9 115 aa8.38□□□□□ -1.07
ACTN1-217ENST00000556203 SMIM6P0DI80 62 aa8.38□□□□□ -1.07
ACTN1-217ENST00000556203 GHRHP01286 108 aa8.37□□□□□ -1.07
ACTN1-217ENST00000556203 COX6CP09669 75 aa8.37□□□□□ -1.07
ACTN1-217ENST00000556203 FABP2P12104 132 aa8.37□□□□□ -1.07
ACTN1-217ENST00000556203 NDUFV3P56181 108 aaKnown RBP8.37□□□□□ -1.07
ACTN1-217ENST00000556203 XP32Q5T750 250 aa8.36□□□□□ -1.07
ACTN1-217ENST00000556203 DNAL4O96015 105 aa8.35□□□□□ -1.07
ACTN1-217ENST00000556203 ASB16-AS1Q495Z4 193 aa8.35□□□□□ -1.07
ACTN1-217ENST00000556203 C9orf92A6NGG3 77 aa8.34□□□□□ -1.07
ACTN1-217ENST00000556203 SEC61BP60468 96 aaKnown RBP8.33□□□□□ -1.08
ACTN1-217ENST00000556203 ORMDL1Q9P0S3 153 aa8.33□□□□□ -1.08
ACTN1-217ENST00000556203 H3BMG7 143 aa8.32□□□□□ -1.08
ACTN1-217ENST00000556203 A0A0U1RQV1 116 aa8.31□□□□□ -1.08
ACTN1-217ENST00000556203 M0R143 59 aa8.31□□□□□ -1.08
ACTN1-217ENST00000556203 SCGB1C2P0DMR2 95 aa8.31□□□□□ -1.08
ACTN1-217ENST00000556203 H3BQ85 93 aa8.29□□□□□ -1.08
ACTN1-217ENST00000556203 Q6Q795 121 aa8.29□□□□□ -1.08
ACTN1-217ENST00000556203 LOC105371267A0A1B0GV96 52 aa8.28□□□□□ -1.08
ACTN1-217ENST00000556203 TEN1Q86WV5 123 aa8.28□□□□□ -1.08
ACTN1-217ENST00000556203 A0A1B0GV72 72 aa8.27□□□□□ -1.09
ACTN1-217ENST00000556203 TMEM256-PLSCR3K7ERE1 68 aa8.27□□□□□ -1.09
ACTN1-217ENST00000556203 TRACP01848 142 aa8.27□□□□□ -1.09
ACTN1-217ENST00000556203 LST1O00453 97 aa8.26□□□□□ -1.09
ACTN1-217ENST00000556203 TSTD3H0UI37 97 aa8.25□□□□□ -1.09
ACTN1-217ENST00000556203 A0A087WSZ3 146 aa8.24□□□□□ -1.09
ACTN1-217ENST00000556203 KRTAP4-1Q9BYQ7 146 aa8.24□□□□□ -1.09
ACTN1-217ENST00000556203 SS18L2Q9UHA2 77 aa8.24□□□□□ -1.09
ACTN1-217ENST00000556203 FAT4Q6V0I7 4981 aa8.24□□□□□ -1.09
ACTN1-217ENST00000556203 A0A1W2PNM2 257 aa8.23□□□□□ -1.09
ACTN1-217ENST00000556203 UBE2V1Q13404 147 aa8.23□□□□□ -1.09
ACTN1-217ENST00000556203 ANKRD29Q8N6D5 301 aa8.23□□□□□ -1.09
ACTN1-217ENST00000556203 NAA38Q9BRA0 125 aaKnown RBP8.23□□□□□ -1.09
ACTN1-217ENST00000556203 PCOTHQ58A44 107 aa8.21□□□□□ -1.1
ACTN1-217ENST00000556203 BATFQ16520 125 aa8.19□□□□□ -1.1
ACTN1-217ENST00000556203 ATXN8Q156A1 80 aa8.18□□□□□ -1.1
ACTN1-217ENST00000556203 TRBV7-4A0A0J9YYF1 115 aa8.17□□□□□ -1.1
ACTN1-217ENST00000556203 BAALC-AS2P0C853 105 aa8.17□□□□□ -1.1
ACTN1-217ENST00000556203 RPL37P61927 97 aaKnown RBP8.17□□□□□ -1.1
ACTN1-217ENST00000556203 CCKP06307 115 aa8.16□□□□□ -1.1
ACTN1-217ENST00000556203 OBSCN-AS1Q96MR7 158 aa8.16□□□□□ -1.1
ACTN1-217ENST00000556203 RBM3P98179 157 aaKnown RBP8.15□□□□□ -1.1
ACTN1-217ENST00000556203 Q96NJ1 140 aa8.15□□□□□ -1.1
ACTN1-217ENST00000556203 LYRM7Q5U5X0 104 aa8.12□□□□□ -1.11
ACTN1-217ENST00000556203 DSCR8Q96T75 97 aa8.12□□□□□ -1.11
ACTN1-217ENST00000556203 VPS25Q9BRG1 176 aa8.12□□□□□ -1.11
ACTN1-217ENST00000556203 LCE2AQ5TA79 106 aaPredicted RBP8.11□□□□□ -1.11
ACTN1-217ENST00000556203 SIGMAR1Q99720 223 aa8.1□□□□□ -1.11
ACTN1-217ENST00000556203 TRBV20-1A0A075B6N2 111 aa8.08□□□□□ -1.12
ACTN1-217ENST00000556203 C9JAW5 83 aa8.08□□□□□ -1.12
ACTN1-217ENST00000556203 IGKV4-1P06312 121 aa8.08□□□□□ -1.12
ACTN1-217ENST00000556203 Q75L30 129 aa8.08□□□□□ -1.12
ACTN1-217ENST00000556203 C9orf118A6NHY6 69 aa8.07□□□□□ -1.12
ACTN1-217ENST00000556203 LINC00472Q9H8W2 130 aa8.07□□□□□ -1.12
ACTN1-217ENST00000556203 TAX1BP3O14907 124 aa8.06□□□□□ -1.12
ACTN1-217ENST00000556203 DEFB116Q30KQ4 102 aa8.06□□□□□ -1.12
ACTN1-217ENST00000556203 JMJD7-PLA2G4BH0Y9G9 81 aa8.05□□□□□ -1.12
ACTN1-217ENST00000556203 DSCR10P59022 87 aa8.05□□□□□ -1.12
ACTN1-217ENST00000556203 ATP11AUNQ6ZP68 121 aa8.04□□□□□ -1.12
ACTN1-217ENST00000556203 A0A1W2PPM0 123 aa8.02□□□□□ -1.13
ACTN1-217ENST00000556203 Q6ZQT0 140 aa8.02□□□□□ -1.13
ACTN1-217ENST00000556203 C20orf166-AS1Q96NR2 134 aa8.02□□□□□ -1.13
ACTN1-217ENST00000556203 LOC110117498A0A087WWA1 95 aa8.01□□□□□ -1.13
ACTN1-217ENST00000556203 A8MUU9 505 aa8□□□□□ -1.13
ACTN1-217ENST00000556203 LINC00313P59037 77 aa8□□□□□ -1.13
ACTN1-217ENST00000556203 C21orf62-AS1Q17RA5 79 aa8□□□□□ -1.13
ACTN1-217ENST00000556203 KRTAP19-2Q3LHN2 52 aa8□□□□□ -1.13
ACTN1-217ENST00000556203 C14orf132Q9NPU4 83 aa8□□□□□ -1.13
ACTN1-217ENST00000556203 LCE2CQ5TA81 110 aa7.99□□□□□ -1.13
ACTN1-217ENST00000556203 PDE6GP18545 87 aa7.98□□□□□ -1.13
ACTN1-217ENST00000556203 NOTCH2NLQ7Z3S9 236 aa7.98□□□□□ -1.13
ACTN1-217ENST00000556203 IGHV6-1A0A0B4J1U7 121 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms