RNA–Protein interactions for RNA: ENST00000555955.3

SIX1-205, Transcript of SIX homeobox 1, humanhuman

TSL 2

Gene SIX1, Length 2,844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-205ENST00000555955 A0A087WSZ3 146 aa9.28□□□□□ -0.92
SIX1-205ENST00000555955 ABCA12Q86UK0 2595 aa9.28□□□□□ -0.92
SIX1-205ENST00000555955 KRTAP4-16G5E9R7 235 aaPredicted RBP9.27□□□□□ -0.92
SIX1-205ENST00000555955 PCOTHQ58A44 107 aa9.26□□□□□ -0.93
SIX1-205ENST00000555955 LINC01554Q52M75 96 aa9.25□□□□□ -0.93
SIX1-205ENST00000555955 IGFL1Q6UW32 110 aa9.25□□□□□ -0.93
SIX1-205ENST00000555955 ITPR3Q14573 2671 aa9.24□□□□□ -0.93
SIX1-205ENST00000555955 ITPR2Q14571 2701 aa9.23□□□□□ -0.93
SIX1-205ENST00000555955 KRTAP26-1Q6PEX3 210 aa9.23□□□□□ -0.93
SIX1-205ENST00000555955 PRR26Q8N8Z3 221 aa9.23□□□□□ -0.93
SIX1-205ENST00000555955 CNBPP62633 177 aaKnown RBP9.23□□□□□ -0.93
SIX1-205ENST00000555955 Q8NAQ8 132 aa9.23□□□□□ -0.93
SIX1-205ENST00000555955 IGLV1-50A0A075B6I6 118 aa9.22□□□□□ -0.93
SIX1-205ENST00000555955 DEFB135Q30KP9 77 aa9.22□□□□□ -0.93
SIX1-205ENST00000555955 SPRR1AP35321 89 aa9.22□□□□□ -0.93
SIX1-205ENST00000555955 ZNF469Q96JG9 3925 aaPredicted RBP9.21□□□□□ -0.94
SIX1-205ENST00000555955 HIVEP2P31629 2446 aa9.2□□□□□ -0.94
SIX1-205ENST00000555955 FAM168BA1KXE4 195 aa9.2□□□□□ -0.94
SIX1-205ENST00000555955 HECTD1Q9ULT8 2610 aa9.19□□□□□ -0.94
SIX1-205ENST00000555955 FASNP49327 2511 aaKnown RBP9.18□□□□□ -0.94
SIX1-205ENST00000555955 IGLV5-37A0A075B6J1 123 aa9.18□□□□□ -0.94
SIX1-205ENST00000555955 ANK3Q12955 4377 aaKnown RBP9.17□□□□□ -0.94
SIX1-205ENST00000555955 MTORP42345 2549 aa9.16□□□□□ -0.94
SIX1-205ENST00000555955 A8MWP4 228 aa9.15□□□□□ -0.94
SIX1-205ENST00000555955 HRES1P13985 223 aa9.14□□□□□ -0.95
SIX1-205ENST00000555955 FLNAP21333 2647 aaKnown RBP9.14□□□□□ -0.95
SIX1-205ENST00000555955 PLA2G1BP04054 148 aaKnown RBP9.13□□□□□ -0.95
SIX1-205ENST00000555955 SPART-AS1P0CW21 52 aa9.13□□□□□ -0.95
SIX1-205ENST00000555955 PLA2G2DQ9UNK4 145 aa9.13□□□□□ -0.95
SIX1-205ENST00000555955 CCDC168Q8NDH2 2452 aa9.12□□□□□ -0.95
SIX1-205ENST00000555955 H0Y9J4 135 aa9.11□□□□□ -0.95
SIX1-205ENST00000555955 KRTAP7-1Q8IUC3 87 aa9.09□□□□□ -0.95
SIX1-205ENST00000555955 LINC00472Q9H8W2 130 aa9.09□□□□□ -0.96
SIX1-205ENST00000555955 IGLV8-61A0A075B6I0 122 aa9.08□□□□□ -0.96
SIX1-205ENST00000555955 MMP24-AS1A0A0U1RRL7 71 aa9.08□□□□□ -0.96
SIX1-205ENST00000555955 REG3GQ6UW15 175 aa9.08□□□□□ -0.96
SIX1-205ENST00000555955 SMR3AQ99954 134 aa9.08□□□□□ -0.96
SIX1-205ENST00000555955 TLX1NBP0CAT3 122 aa9.07□□□□□ -0.96
SIX1-205ENST00000555955 BAHCC1Q9P281 2608 aa9.06□□□□□ -0.96
SIX1-205ENST00000555955 IGKV2-24A0A0C4DH68 120 aa9.04□□□□□ -0.96
SIX1-205ENST00000555955 PRLHP81277 87 aa9.04□□□□□ -0.96
SIX1-205ENST00000555955 TP53AIP1Q9HCN2 124 aa9.03□□□□□ -0.96
SIX1-205ENST00000555955 VWFP04275 2813 aa9.02□□□□□ -0.97
SIX1-205ENST00000555955 INAFM1C9JVW0 142 aa9.01□□□□□ -0.97
SIX1-205ENST00000555955 RETNLBQ9BQ08 111 aa9.01□□□□□ -0.97
SIX1-205ENST00000555955 RTL8CO15255 209 aa9□□□□□ -0.97
SIX1-205ENST00000555955 ASB16-AS1Q495Z4 193 aa9□□□□□ -0.97
SIX1-205ENST00000555955 PKD1L1Q8TDX9 2849 aa9□□□□□ -0.97
SIX1-205ENST00000555955 HIVEP1P15822 2718 aa9□□□□□ -0.97
SIX1-205ENST00000555955 SRRM2Q9UQ35 2752 aaKnown RBP9□□□□□ -0.97
SIX1-205ENST00000555955 CSAG1Q6PB30 78 aa8.99□□□□□ -0.97
SIX1-205ENST00000555955 Q6ZR54 194 aa8.99□□□□□ -0.97
SIX1-205ENST00000555955 TENM2Q9NT68 2774 aa8.99□□□□□ -0.97
SIX1-205ENST00000555955 NSD1Q96L73 2696 aaPredicted RBP8.98□□□□□ -0.97
SIX1-205ENST00000555955 DEFB131BA0A096LNP1 70 aa8.97□□□□□ -0.97
SIX1-205ENST00000555955 A0A096LNI7 61 aa8.95□□□□□ -0.98
SIX1-205ENST00000555955 ACANP16112 2415 aa8.94□□□□□ -0.98
SIX1-205ENST00000555955 LINC01556Q5JQF7 62 aa8.94□□□□□ -0.98
SIX1-205ENST00000555955 CSMD3Q7Z407 3707 aa8.93□□□□□ -0.98
SIX1-205ENST00000555955 A0A087X002 238 aa8.91□□□□□ -0.98
SIX1-205ENST00000555955 H3BNG1 76 aa8.9□□□□□ -0.98
SIX1-205ENST00000555955 CASC10Q5T4H9 136 aa8.9□□□□□ -0.98
SIX1-205ENST00000555955 SPATA8Q6RVD6 105 aa8.9□□□□□ -0.98
SIX1-205ENST00000555955 C8orf17Q9NRJ1 99 aa8.89□□□□□ -0.99
SIX1-205ENST00000555955 FLNBO75369 2602 aaKnown RBP8.89□□□□□ -0.99
SIX1-205ENST00000555955 ZNF706Q9Y5V0 76 aaPredicted RBP8.89□□□□□ -0.99
SIX1-205ENST00000555955 A0A1B0GU69 56 aa8.88□□□□□ -0.99
SIX1-205ENST00000555955 KRTAP10-3P60369 221 aa8.87□□□□□ -0.99
SIX1-205ENST00000555955 NOTCH2Q04721 2471 aa8.87□□□□□ -0.99
SIX1-205ENST00000555955 ACYP2P14621 99 aa8.86□□□□□ -0.99
SIX1-205ENST00000555955 IGHV6-1A0A0B4J1U7 121 aa8.85□□□□□ -0.99
SIX1-205ENST00000555955 MIR22HGQ0VDD5 57 aa8.85□□□□□ -0.99
SIX1-205ENST00000555955 K7EIL1 84 aa8.84□□□□□ -0.99
SIX1-205ENST00000555955 SPRR1BP22528 89 aa8.84□□□□□ -0.99
SIX1-205ENST00000555955 C1orf134Q5TEV5 83 aa8.83□□□□□ -1
SIX1-205ENST00000555955 Q96NJ1 140 aa8.83□□□□□ -1
SIX1-205ENST00000555955 TRRAPQ9Y4A5 3859 aa8.82□□□□□ -1
SIX1-205ENST00000555955 MRPL34Q9BQ48 92 aaKnown RBP8.81□□□□□ -1
SIX1-205ENST00000555955 UQCR11O14957 56 aa8.8□□□□□ -1
SIX1-205ENST00000555955 FBN1P35555 2871 aaKnown RBP8.8□□□□□ -1
SIX1-205ENST00000555955 DNAH10OSP0CZ25 163 aa8.8□□□□□ -1
SIX1-205ENST00000555955 TEP1Q99973 2627 aaKnown RBP8.78□□□□□ -1
SIX1-205ENST00000555955 A0A1B0GVX0 72 aa8.78□□□□□ -1
SIX1-205ENST00000555955 KRTAP24-1Q3LI83 254 aa8.77□□□□□ -1
SIX1-205ENST00000555955 CDK2AP2O75956 126 aa8.75□□□□□ -1.01
SIX1-205ENST00000555955 KRTAP11-1Q8IUC1 163 aa8.75□□□□□ -1.01
SIX1-205ENST00000555955 Q5W150 140 aa8.75□□□□□ -1.01
SIX1-205ENST00000555955 ALMS1Q8TCU4 4167 aa8.75□□□□□ -1.01
SIX1-205ENST00000555955 NOTCH2NLQ7Z3S9 236 aa8.74□□□□□ -1.01
SIX1-205ENST00000555955 IGLV9-49A0A0B4J1Y8 123 aa8.71□□□□□ -1.02
SIX1-205ENST00000555955 DMAC1Q96GE9 116 aa8.71□□□□□ -1.02
SIX1-205ENST00000555955 MAST4O15021 2626 aa8.7□□□□□ -1.02
SIX1-205ENST00000555955 ZNF861PO60384 105 aa8.7□□□□□ -1.02
SIX1-205ENST00000555955 TENM1Q9UKZ4 2725 aa8.69□□□□□ -1.02
SIX1-205ENST00000555955 TENM3Q9P273 2699 aa8.69□□□□□ -1.02
SIX1-205ENST00000555955 ANK2Q01484 3957 aa8.68□□□□□ -1.02
SIX1-205ENST00000555955 KRTAP13-3Q3SY46 172 aa8.67□□□□□ -1.02
SIX1-205ENST00000555955 COL7A1Q02388 2944 aa8.66□□□□□ -1.02
SIX1-205ENST00000555955 ROMO1P60602 79 aa8.66□□□□□ -1.02
SIX1-205ENST00000555955 CHTF8P0CG12 524 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms