RNA–Protein interactions for RNA: ENST00000555935.1

CHD8-209, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 2,617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-209ENST00000555935 COA5Q86WW8 74 aa4.89□□□□□ -1.63
CHD8-209ENST00000555935 DEFB131BA0A096LNP1 70 aa4.88□□□□□ -1.63
CHD8-209ENST00000555935 J3QKU1 62 aa4.88□□□□□ -1.63
CHD8-209ENST00000555935 RETNQ9HD89 108 aa4.88□□□□□ -1.63
CHD8-209ENST00000555935 A6NED7 52 aa4.88□□□□□ -1.63
CHD8-209ENST00000555935 LCA10Q71F78 164 aa4.87□□□□□ -1.63
CHD8-209ENST00000555935 SPTSSBQ8NFR3 76 aa4.87□□□□□ -1.63
CHD8-209ENST00000555935 LINC00472Q9H8W2 130 aa4.87□□□□□ -1.63
CHD8-209ENST00000555935 PHF5AQ7RTV0 110 aaKnown RBP4.87□□□□□ -1.63
CHD8-209ENST00000555935 CDC42SE1Q9NRR8 79 aa4.86□□□□□ -1.63
CHD8-209ENST00000555935 SPRR1BP22528 89 aa4.86□□□□□ -1.63
CHD8-209ENST00000555935 PRLHP81277 87 aa4.86□□□□□ -1.63
CHD8-209ENST00000555935 CASC10Q5T4H9 136 aa4.86□□□□□ -1.63
CHD8-209ENST00000555935 A6NN06 94 aa4.85□□□□□ -1.63
CHD8-209ENST00000555935 C11orf45Q8TAV5 145 aa4.85□□□□□ -1.63
CHD8-209ENST00000555935 ACANP16112 2415 aa4.85□□□□□ -1.63
CHD8-209ENST00000555935 RBM12B-AS1Q9P1G2 102 aa4.84□□□□□ -1.63
CHD8-209ENST00000555935 LINC01558Q9Y6Z2 57 aa4.84□□□□□ -1.63
CHD8-209ENST00000555935 MMP24-AS1A0A0U1RRL7 71 aa4.84□□□□□ -1.63
CHD8-209ENST00000555935 SMR3AQ99954 134 aa4.84□□□□□ -1.63
CHD8-209ENST00000555935 TP53AIP1Q9HCN2 124 aa4.84□□□□□ -1.63
CHD8-209ENST00000555935 H0Y9J4 135 aa4.83□□□□□ -1.64
CHD8-209ENST00000555935 PLAC8Q9NZF1 115 aa4.83□□□□□ -1.64
CHD8-209ENST00000555935 VWFP04275 2813 aa4.83□□□□□ -1.64
CHD8-209ENST00000555935 HIVEP1P15822 2718 aa4.82□□□□□ -1.64
CHD8-209ENST00000555935 UNC79Q9P2D8 2635 aa4.82□□□□□ -1.64
CHD8-209ENST00000555935 A0A096LNI7 61 aa4.81□□□□□ -1.64
CHD8-209ENST00000555935 MOBPQ13875 183 aa4.81□□□□□ -1.64
CHD8-209ENST00000555935 ASB16-AS1Q495Z4 193 aa4.81□□□□□ -1.64
CHD8-209ENST00000555935 C7orf65Q6ZTY9 151 aa4.81□□□□□ -1.64
CHD8-209ENST00000555935 PDZD2O15018 2839 aa4.8□□□□□ -1.64
CHD8-209ENST00000555935 Q6ZR54 194 aa4.8□□□□□ -1.64
CHD8-209ENST00000555935 PCOTHQ58A44 107 aa4.79□□□□□ -1.64
CHD8-209ENST00000555935 KRTAP10-11P60412 298 aa4.79□□□□□ -1.64
CHD8-209ENST00000555935 IGKV2-24A0A0C4DH68 120 aa4.78□□□□□ -1.64
CHD8-209ENST00000555935 SPAG11AQ6PDA7 123 aa4.78□□□□□ -1.64
CHD8-209ENST00000555935 INAFM1C9JVW0 142 aa4.77□□□□□ -1.65
CHD8-209ENST00000555935 OXLD1Q5BKU9 147 aa4.77□□□□□ -1.65
CHD8-209ENST00000555935 NOTCH2Q04721 2471 aa4.77□□□□□ -1.65
CHD8-209ENST00000555935 C8orf17Q9NRJ1 99 aa4.76□□□□□ -1.65
CHD8-209ENST00000555935 HRES1P13985 223 aa4.76□□□□□ -1.65
CHD8-209ENST00000555935 Q96NJ1 140 aa4.75□□□□□ -1.65
CHD8-209ENST00000555935 SPINK7P58062 85 aa4.74□□□□□ -1.65
CHD8-209ENST00000555935 KRTAP11-1Q8IUC1 163 aa4.74□□□□□ -1.65
CHD8-209ENST00000555935 C14orf177Q52M58 125 aa4.73□□□□□ -1.65
CHD8-209ENST00000555935 F8P00451 2351 aa4.73□□□□□ -1.65
CHD8-209ENST00000555935 A0A1B0GVX0 72 aa4.73□□□□□ -1.65
CHD8-209ENST00000555935 MRPL34Q9BQ48 92 aaKnown RBP4.72□□□□□ -1.65
CHD8-209ENST00000555935 DNAH1Q9P2D7 4330 aa4.72□□□□□ -1.65
CHD8-209ENST00000555935 CDK2AP2O75956 126 aa4.71□□□□□ -1.66
CHD8-209ENST00000555935 KRTAP13-1Q8IUC0 172 aa4.71□□□□□ -1.66
CHD8-209ENST00000555935 PKD1L1Q8TDX9 2849 aa4.71□□□□□ -1.66
CHD8-209ENST00000555935 BAHCC1Q9P281 2608 aa4.71□□□□□ -1.66
CHD8-209ENST00000555935 TENM1Q9UKZ4 2725 aa4.71□□□□□ -1.66
CHD8-209ENST00000555935 IGHV6-1A0A0B4J1U7 121 aa4.7□□□□□ -1.66
CHD8-209ENST00000555935 CHTF8P0CG12 524 aa4.7□□□□□ -1.66
CHD8-209ENST00000555935 ITPR2Q14571 2701 aa4.68□□□□□ -1.66
CHD8-209ENST00000555935 IGLV9-49A0A0B4J1Y8 123 aa4.68□□□□□ -1.66
CHD8-209ENST00000555935 LINC00483Q53H64 154 aa4.68□□□□□ -1.66
CHD8-209ENST00000555935 KRTAP1-5Q9BYS1 174 aa4.68□□□□□ -1.66
CHD8-209ENST00000555935 TENM3Q9P273 2699 aa4.67□□□□□ -1.66
CHD8-209ENST00000555935 ATRQ13535 2644 aa4.67□□□□□ -1.66
CHD8-209ENST00000555935 MDFIQ99750 246 aa4.67□□□□□ -1.66
CHD8-209ENST00000555935 TEP1Q99973 2627 aaKnown RBP4.67□□□□□ -1.66
CHD8-209ENST00000555935 TRRAPQ9Y4A5 3859 aa4.67□□□□□ -1.66
CHD8-209ENST00000555935 ACYP2P14621 99 aa4.67□□□□□ -1.66
CHD8-209ENST00000555935 ZNF706Q9Y5V0 76 aaPredicted RBP4.66□□□□□ -1.66
CHD8-209ENST00000555935 A0A087X002 238 aa4.66□□□□□ -1.66
CHD8-209ENST00000555935 PRR26Q8N8Z3 221 aa4.66□□□□□ -1.66
CHD8-209ENST00000555935 LINC00313P59037 77 aa4.65□□□□□ -1.66
CHD8-209ENST00000555935 TENM4Q6N022 2769 aa4.65□□□□□ -1.66
CHD8-209ENST00000555935 PLA2G1BP04054 148 aaKnown RBP4.64□□□□□ -1.67
CHD8-209ENST00000555935 KRTAP13-3Q3SY46 172 aa4.64□□□□□ -1.67
CHD8-209ENST00000555935 NSD1Q96L73 2696 aaPredicted RBP4.64□□□□□ -1.67
CHD8-209ENST00000555935 FASNP49327 2511 aaKnown RBP4.64□□□□□ -1.67
CHD8-209ENST00000555935 C8orf87E5RJ46 101 aa4.64□□□□□ -1.67
CHD8-209ENST00000555935 HELZ2Q9BYK8 2649 aaKnown RBP4.64□□□□□ -1.67
CHD8-209ENST00000555935 WWC2-AS2Q96NR7 200 aa4.63□□□□□ -1.67
CHD8-209ENST00000555935 NOTCH2NLQ7Z3S9 236 aa4.62□□□□□ -1.67
CHD8-209ENST00000555935 DMAC1Q96GE9 116 aa4.62□□□□□ -1.67
CHD8-209ENST00000555935 UBE2DNLQ8IWF7 75 aa4.62□□□□□ -1.67
CHD8-209ENST00000555935 Q5W150 140 aa4.61□□□□□ -1.67
CHD8-209ENST00000555935 TENM2Q9NT68 2774 aa4.61□□□□□ -1.67
CHD8-209ENST00000555935 K7EIL1 84 aa4.61□□□□□ -1.67
CHD8-209ENST00000555935 SPATA8Q6RVD6 105 aa4.61□□□□□ -1.67
CHD8-209ENST00000555935 OTOGQ6ZRI0 2925 aa4.61□□□□□ -1.67
CHD8-209ENST00000555935 A0A1B0GU69 56 aa4.6□□□□□ -1.67
CHD8-209ENST00000555935 PANO1I0J062 215 aa4.6□□□□□ -1.67
CHD8-209ENST00000555935 LCE2DQ5TA82 110 aaPredicted RBP4.6□□□□□ -1.67
CHD8-209ENST00000555935 PRAC1Q96KF2 57 aa4.6□□□□□ -1.67
CHD8-209ENST00000555935 SPACA4Q8TDM5 124 aa4.59□□□□□ -1.67
CHD8-209ENST00000555935 SRRM2Q9UQ35 2752 aaKnown RBP4.59□□□□□ -1.67
CHD8-209ENST00000555935 ANK2Q01484 3957 aa4.59□□□□□ -1.67
CHD8-209ENST00000555935 RTL8CO15255 209 aa4.59□□□□□ -1.68
CHD8-209ENST00000555935 LINC01554Q52M75 96 aa4.59□□□□□ -1.68
CHD8-209ENST00000555935 APLNQ9ULZ1 77 aa4.57□□□□□ -1.68
CHD8-209ENST00000555935 UQCR11O14957 56 aa4.57□□□□□ -1.68
CHD8-209ENST00000555935 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.57□□□□□ -1.68
CHD8-209ENST00000555935 FLNBO75369 2602 aaKnown RBP4.57□□□□□ -1.68
CHD8-209ENST00000555935 FAM229AH3BQW9 127 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 161.5 ms