RNA–Protein interactions for RNA: ENST00000555548.1

PAX3-210, Transcript of paired box 3, humanhuman

TSL 4

Gene PAX3, Length 458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-210ENST00000555548 CDKN2A-AS1Q9UH64 79 aa3.68□□□□□ -1.82
PAX3-210ENST00000555548 DYNC2H1Q8NCM8 4307 aaKnown RBP3.67□□□□□ -1.82
PAX3-210ENST00000555548 DNAH9Q9NYC9 4486 aa3.67□□□□□ -1.82
PAX3-210ENST00000555548 LOC110117498A0A087WWA1 95 aa3.67□□□□□ -1.82
PAX3-210ENST00000555548 H7BZZ5 65 aa3.67□□□□□ -1.82
PAX3-210ENST00000555548 BRD3OSQ6XYD6 125 aa3.67□□□□□ -1.82
PAX3-210ENST00000555548 Q8N2B8 174 aa3.67□□□□□ -1.82
PAX3-210ENST00000555548 XAGE1AQ9HD64 81 aa3.67□□□□□ -1.82
PAX3-210ENST00000555548 RTL8CO15255 209 aa3.66□□□□□ -1.82
PAX3-210ENST00000555548 FAM74A4Q5TZK3 123 aa3.66□□□□□ -1.82
PAX3-210ENST00000555548 HRCT1Q6UXD1 115 aa3.66□□□□□ -1.82
PAX3-210ENST00000555548 DSCR8Q96T75 97 aa3.66□□□□□ -1.82
PAX3-210ENST00000555548 C11orf68Q9H3H3 251 aaKnown RBP3.66□□□□□ -1.82
PAX3-210ENST00000555548 SACSQ9NZJ4 4579 aa3.66□□□□□ -1.82
PAX3-210ENST00000555548 RYR2Q92736 4967 aa3.65□□□□□ -1.82
PAX3-210ENST00000555548 IGHV3-64A0A075B6Q5 118 aa3.65□□□□□ -1.83
PAX3-210ENST00000555548 TRAV12-3A0A0B4J271 114 aa3.65□□□□□ -1.83
PAX3-210ENST00000555548 COX17Q14061 63 aa3.65□□□□□ -1.83
PAX3-210ENST00000555548 TENM3Q9P273 2699 aa3.65□□□□□ -1.83
PAX3-210ENST00000555548 TRBV6-4A0A1B0GX49 114 aa3.64□□□□□ -1.83
PAX3-210ENST00000555548 G3V318 75 aa3.64□□□□□ -1.83
PAX3-210ENST00000555548 H3BPC8 53 aa3.64□□□□□ -1.83
PAX3-210ENST00000555548 K7EIL1 84 aa3.64□□□□□ -1.83
PAX3-210ENST00000555548 KRTAP12-2P59991 146 aa3.64□□□□□ -1.83
PAX3-210ENST00000555548 BLCAPP62952 87 aa3.64□□□□□ -1.83
PAX3-210ENST00000555548 SOSTDC1Q6X4U4 206 aa3.64□□□□□ -1.83
PAX3-210ENST00000555548 CDC42SE2Q9NRR3 84 aa3.64□□□□□ -1.83
PAX3-210ENST00000555548 COL7A1Q02388 2944 aa3.64□□□□□ -1.83
PAX3-210ENST00000555548 PRM2P04554 102 aa3.63□□□□□ -1.83
PAX3-210ENST00000555548 SMIM11BQ8TCY0 68 aa3.63□□□□□ -1.83
PAX3-210ENST00000555548 DYNLRB2Q8TF09 96 aa3.63□□□□□ -1.83
PAX3-210ENST00000555548 CYSTM1Q9H1C7 97 aa3.63□□□□□ -1.83
PAX3-210ENST00000555548 C14orf132Q9NPU4 83 aa3.63□□□□□ -1.83
PAX3-210ENST00000555548 TENM2Q9NT68 2774 aa3.62□□□□□ -1.83
PAX3-210ENST00000555548 IGKV3D-7A0A0C4DH55 119 aa3.62□□□□□ -1.83
PAX3-210ENST00000555548 TRBV7-6A0A0J9YX20 115 aa3.62□□□□□ -1.83
PAX3-210ENST00000555548 DEFB114Q30KQ6 69 aa3.62□□□□□ -1.83
PAX3-210ENST00000555548 C20orf197Q8N268 126 aa3.62□□□□□ -1.83
PAX3-210ENST00000555548 Q8N814 137 aa3.62□□□□□ -1.83
PAX3-210ENST00000555548 COX7B2Q8TF08 81 aa3.62□□□□□ -1.83
PAX3-210ENST00000555548 DNAH1Q9P2D7 4330 aa3.61□□□□□ -1.83
PAX3-210ENST00000555548 IGKV2-29A2NJV5 120 aaPredicted RBP3.61□□□□□ -1.83
PAX3-210ENST00000555548 PRB4P10163 310 aaPredicted RBP3.61□□□□□ -1.83
PAX3-210ENST00000555548 RBM3P98179 157 aaKnown RBP3.61□□□□□ -1.83
PAX3-210ENST00000555548 COX6A2Q02221 97 aa3.61□□□□□ -1.83
PAX3-210ENST00000555548 SS18Q15532 418 aa3.61□□□□□ -1.83
PAX3-210ENST00000555548 A0A1W2PNM2 257 aa3.6□□□□□ -1.83
PAX3-210ENST00000555548 C3orf84H3BNL1 204 aa3.6□□□□□ -1.83
PAX3-210ENST00000555548 CCL18P55774 89 aa3.6□□□□□ -1.83
PAX3-210ENST00000555548 LCE1EQ5T753 118 aa3.6□□□□□ -1.83
PAX3-210ENST00000555548 FP248Q71RG6 208 aaPredicted RBP3.6□□□□□ -1.83
PAX3-210ENST00000555548 PRR15Q8IV56 129 aa3.6□□□□□ -1.83
PAX3-210ENST00000555548 TM2D3Q9BRN9 247 aa3.6□□□□□ -1.83
PAX3-210ENST00000555548 DNAH7Q8WXX0 4024 aa3.6□□□□□ -1.83
PAX3-210ENST00000555548 A0A087WVE0 104 aa3.59□□□□□ -1.83
PAX3-210ENST00000555548 TRBV7-4A0A0J9YYF1 115 aa3.59□□□□□ -1.83
PAX3-210ENST00000555548 MIFP14174 115 aa3.59□□□□□ -1.83
PAX3-210ENST00000555548 PRB3Q04118 309 aaPredicted RBP3.59□□□□□ -1.83
PAX3-210ENST00000555548 ENHOQ6UWT2 76 aa3.59□□□□□ -1.83
PAX3-210ENST00000555548 Q6ZQT0 140 aa3.59□□□□□ -1.83
PAX3-210ENST00000555548 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.58□□□□□ -1.84
PAX3-210ENST00000555548 TRAV23DV6A0A075B6W5 121 aa3.58□□□□□ -1.84
PAX3-210ENST00000555548 LCE6AA0A183 80 aa3.58□□□□□ -1.84
PAX3-210ENST00000555548 NCR3O14931 201 aa3.58□□□□□ -1.84
PAX3-210ENST00000555548 LINC00158P58513 81 aa3.58□□□□□ -1.84
PAX3-210ENST00000555548 Q1T7F1 81 aa3.58□□□□□ -1.84
PAX3-210ENST00000555548 SPINK13Q1W4C9 94 aa3.58□□□□□ -1.84
PAX3-210ENST00000555548 Q8IZM0 81 aa3.58□□□□□ -1.84
PAX3-210ENST00000555548 ESRGQ1W209 222 aa3.57□□□□□ -1.84
PAX3-210ENST00000555548 LINC00575Q6W349 94 aa3.57□□□□□ -1.84
PAX3-210ENST00000555548 LYSTQ99698 3801 aa3.56□□□□□ -1.84
PAX3-210ENST00000555548 SPRR5A0A1B0GTR4 108 aa3.56□□□□□ -1.84
PAX3-210ENST00000555548 A0A1W2PNN7 141 aa3.56□□□□□ -1.84
PAX3-210ENST00000555548 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.56□□□□□ -1.84
PAX3-210ENST00000555548 WFDC9Q8NEX5 89 aa3.56□□□□□ -1.84
PAX3-210ENST00000555548 TMEM254Q8TBM7 123 aa3.56□□□□□ -1.84
PAX3-210ENST00000555548 HYDINQ4G0P3 5121 aa3.55□□□□□ -1.84
PAX3-210ENST00000555548 HUWE1Q7Z6Z7 4374 aaKnown RBP3.55□□□□□ -1.84
PAX3-210ENST00000555548 RYR1P21817 5038 aa3.55□□□□□ -1.84
PAX3-210ENST00000555548 STAB2Q8WWQ8 2551 aa3.55□□□□□ -1.84
PAX3-210ENST00000555548 F8WEM9 126 aa3.55□□□□□ -1.84
PAX3-210ENST00000555548 H3BUX3 64 aa3.55□□□□□ -1.84
PAX3-210ENST00000555548 IGLV6-57P01721 117 aa3.55□□□□□ -1.84
PAX3-210ENST00000555548 DEFB1P60022 68 aa3.55□□□□□ -1.84
PAX3-210ENST00000555548 HERC2O95714 4834 aa3.54□□□□□ -1.84
PAX3-210ENST00000555548 IGLV10-54A0A075B6I4 117 aa3.54□□□□□ -1.84
PAX3-210ENST00000555548 TRBV6-8A0A0A6YYG3 113 aa3.53□□□□□ -1.84
PAX3-210ENST00000555548 IGKV2-24A0A0C4DH68 120 aa3.53□□□□□ -1.84
PAX3-210ENST00000555548 NDUFB1O75438 58 aa3.53□□□□□ -1.84
PAX3-210ENST00000555548 NREPQ16612 68 aa3.53□□□□□ -1.84
PAX3-210ENST00000555548 BRK1Q8WUW1 75 aa3.53□□□□□ -1.84
PAX3-210ENST00000555548 IGKV3-7A0A075B6H7 116 aa3.52□□□□□ -1.85
PAX3-210ENST00000555548 GVQW2A0A096LPI5 108 aaPredicted RBP3.52□□□□□ -1.85
PAX3-210ENST00000555548 COX7BP24311 80 aa3.52□□□□□ -1.85
PAX3-210ENST00000555548 FUSP35637 526 aaKnown RBP eCLIP3.52□□□□□ -1.85
PAX3-210ENST00000555548 HAMPP81172 84 aa3.52□□□□□ -1.85
PAX3-210ENST00000555548 DEFB104AQ8WTQ1 72 aa3.52□□□□□ -1.85
PAX3-210ENST00000555548 CYP4F30PQ9H0H9 118 aa3.52□□□□□ -1.85
PAX3-210ENST00000555548 PSORS1C2Q9UIG4 136 aa3.52□□□□□ -1.85
PAX3-210ENST00000555548 TRAV10A0A0B4J240 114 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms