RNA–Protein interactions for RNA: ENST00000555117.1

COCH-208, Transcript of cochlin, humanhuman

TSL 2

Gene COCH, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COCH-208ENST00000555117 FP248Q71RG6 208 aaPredicted RBP12.59□□□□□ -0.39
COCH-208ENST00000555117 LAMTOR3Q9UHA4 124 aa12.58□□□□□ -0.4
COCH-208ENST00000555117 FAT4Q6V0I7 4981 aa12.58□□□□□ -0.4
COCH-208ENST00000555117 H0YGX0 51 aa12.56□□□□□ -0.4
COCH-208ENST00000555117 SPINK1P00995 79 aa12.56□□□□□ -0.4
COCH-208ENST00000555117 Q1RN00 199 aa12.56□□□□□ -0.4
COCH-208ENST00000555117 C9orf153Q5TBE3 101 aa12.56□□□□□ -0.4
COCH-208ENST00000555117 Q6ZQY7 126 aa12.56□□□□□ -0.4
COCH-208ENST00000555117 FAM218AQ96MZ4 157 aa12.55□□□□□ -0.4
COCH-208ENST00000555117 TRIAP1O43715 76 aa12.53□□□□□ -0.4
COCH-208ENST00000555117 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.53□□□□□ -0.4
COCH-208ENST00000555117 LCE2AQ5TA79 106 aaPredicted RBP12.5□□□□□ -0.41
COCH-208ENST00000555117 RPS29P62273 56 aaKnown RBP12.49□□□□□ -0.41
COCH-208ENST00000555117 KRTAP13-3Q3SY46 172 aa12.49□□□□□ -0.41
COCH-208ENST00000555117 TSTD3H0UI37 97 aa12.47□□□□□ -0.41
COCH-208ENST00000555117 A0A1B0GX51 115 aa12.46□□□□□ -0.41
COCH-208ENST00000555117 M0R143 59 aa12.45□□□□□ -0.42
COCH-208ENST00000555117 PPDPFLQ8WWR9 84 aa12.45□□□□□ -0.42
COCH-208ENST00000555117 CLEC2BQ92478 149 aa12.43□□□□□ -0.42
COCH-208ENST00000555117 PSMB2P49721 201 aa12.42□□□□□ -0.42
COCH-208ENST00000555117 IGLV8-61A0A075B6I0 122 aa12.41□□□□□ -0.42
COCH-208ENST00000555117 SNCGO76070 127 aa12.41□□□□□ -0.42
COCH-208ENST00000555117 OCIAD2Q56VL3 154 aa12.41□□□□□ -0.42
COCH-208ENST00000555117 A0A0G2JQZ4 141 aa12.4□□□□□ -0.42
COCH-208ENST00000555117 CD164Q04900 197 aa12.4□□□□□ -0.42
COCH-208ENST00000555117 COX6CP09669 75 aa12.38□□□□□ -0.43
COCH-208ENST00000555117 ASB16-AS1Q495Z4 193 aa12.37□□□□□ -0.43
COCH-208ENST00000555117 F8WEM9 126 aa12.36□□□□□ -0.43
COCH-208ENST00000555117 HRCT1Q6UXD1 115 aa12.36□□□□□ -0.43
COCH-208ENST00000555117 SNHG12Q9BXW3 62 aa12.35□□□□□ -0.43
COCH-208ENST00000555117 KRTAP9-2Q9BYQ4 174 aa12.35□□□□□ -0.43
COCH-208ENST00000555117 SEC61BP60468 96 aaKnown RBP12.32□□□□□ -0.44
COCH-208ENST00000555117 Q6JHZ5 121 aa12.32□□□□□ -0.44
COCH-208ENST00000555117 IGFL1Q6UW32 110 aa12.31□□□□□ -0.44
COCH-208ENST00000555117 LST1O00453 97 aa12.3□□□□□ -0.44
COCH-208ENST00000555117 NDUFV3P56181 108 aaKnown RBP12.3□□□□□ -0.44
COCH-208ENST00000555117 Q5XG85 94 aa12.3□□□□□ -0.44
COCH-208ENST00000555117 LIMD2Q9BT23 127 aa12.3□□□□□ -0.44
COCH-208ENST00000555117 SCGB1C2P0DMR2 95 aa12.29□□□□□ -0.44
COCH-208ENST00000555117 H3BUT2 72 aa12.28□□□□□ -0.44
COCH-208ENST00000555117 DNAL4O96015 105 aa12.28□□□□□ -0.44
COCH-208ENST00000555117 GHRHP01286 108 aa12.28□□□□□ -0.44
COCH-208ENST00000555117 TRACP01848 142 aa12.28□□□□□ -0.44
COCH-208ENST00000555117 NAA38Q9BRA0 125 aaKnown RBP12.27□□□□□ -0.45
COCH-208ENST00000555117 KRTAP4-1Q9BYQ7 146 aa12.27□□□□□ -0.45
COCH-208ENST00000555117 ORMDL1Q9P0S3 153 aa12.27□□□□□ -0.45
COCH-208ENST00000555117 FABP2P12104 132 aa12.25□□□□□ -0.45
COCH-208ENST00000555117 BATFQ16520 125 aa12.25□□□□□ -0.45
COCH-208ENST00000555117 XP32Q5T750 250 aa12.25□□□□□ -0.45
COCH-208ENST00000555117 H3BQ85 93 aa12.24□□□□□ -0.45
COCH-208ENST00000555117 H3BMG7 143 aa12.21□□□□□ -0.45
COCH-208ENST00000555117 TRBV7-7A0A0K0K1E9 115 aa12.2□□□□□ -0.46
COCH-208ENST00000555117 TMEM256-PLSCR3K7ERE1 68 aa12.2□□□□□ -0.46
COCH-208ENST00000555117 TCL1BO95988 128 aa12.19□□□□□ -0.46
COCH-208ENST00000555117 C1orf195Q5TG92 126 aa12.18□□□□□ -0.46
COCH-208ENST00000555117 UBE2V1Q13404 147 aa12.17□□□□□ -0.46
COCH-208ENST00000555117 Q6Q795 121 aa12.17□□□□□ -0.46
COCH-208ENST00000555117 TAX1BP3O14907 124 aa12.16□□□□□ -0.46
COCH-208ENST00000555117 ATXN8Q156A1 80 aa12.15□□□□□ -0.46
COCH-208ENST00000555117 C9orf118A6NHY6 69 aa12.14□□□□□ -0.47
COCH-208ENST00000555117 TEN1Q86WV5 123 aa12.12□□□□□ -0.47
COCH-208ENST00000555117 BAALC-AS2P0C853 105 aa12.11□□□□□ -0.47
COCH-208ENST00000555117 A0A1W2PNM2 257 aa12.1□□□□□ -0.47
COCH-208ENST00000555117 C9orf92A6NGG3 77 aa12.1□□□□□ -0.47
COCH-208ENST00000555117 LYRM7Q5U5X0 104 aa12.1□□□□□ -0.47
COCH-208ENST00000555117 TRBV20-1A0A075B6N2 111 aa12.08□□□□□ -0.48
COCH-208ENST00000555117 A0A1B0GV72 72 aa12.08□□□□□ -0.48
COCH-208ENST00000555117 ANKRD29Q8N6D5 301 aa12.08□□□□□ -0.48
COCH-208ENST00000555117 A0A1W2PPM0 123 aa12.06□□□□□ -0.48
COCH-208ENST00000555117 TRBV7-4A0A0J9YYF1 115 aa12.04□□□□□ -0.48
COCH-208ENST00000555117 PCOTHQ58A44 107 aa12.04□□□□□ -0.48
COCH-208ENST00000555117 A0A087WSZ3 146 aa12.02□□□□□ -0.49
COCH-208ENST00000555117 RBM3P98179 157 aaKnown RBP12.01□□□□□ -0.49
COCH-208ENST00000555117 SS18L2Q9UHA2 77 aa12□□□□□ -0.49
COCH-208ENST00000555117 KRTAP9-6A0A140TA67 174 aa11.99□□□□□ -0.49
COCH-208ENST00000555117 C9JAW5 83 aa11.99□□□□□ -0.49
COCH-208ENST00000555117 COL5A1-AS1Q5SY13 56 aa11.99□□□□□ -0.49
COCH-208ENST00000555117 LCE2CQ5TA81 110 aa11.98□□□□□ -0.49
COCH-208ENST00000555117 CCKP06307 115 aa11.97□□□□□ -0.49
COCH-208ENST00000555117 Q96NJ1 140 aa11.96□□□□□ -0.49
COCH-208ENST00000555117 PCP4L1A6NKN8 68 aa11.95□□□□□ -0.5
COCH-208ENST00000555117 DSCR8Q96T75 97 aa11.95□□□□□ -0.5
COCH-208ENST00000555117 KRTAP19-2Q3LHN2 52 aa11.94□□□□□ -0.5
COCH-208ENST00000555117 OBSCN-AS1Q96MR7 158 aa11.93□□□□□ -0.5
COCH-208ENST00000555117 JMJD7-PLA2G4BH0Y9G9 81 aa11.92□□□□□ -0.5
COCH-208ENST00000555117 SPCS1Q9Y6A9 102 aa11.9□□□□□ -0.5
COCH-208ENST00000555117 H3BT86 120 aa11.89□□□□□ -0.51
COCH-208ENST00000555117 LOC110117498A0A087WWA1 95 aa11.88□□□□□ -0.51
COCH-208ENST00000555117 Q6ZQT0 140 aa11.88□□□□□ -0.51
COCH-208ENST00000555117 MTURNQ8N3F0 131 aa11.88□□□□□ -0.51
COCH-208ENST00000555117 LCE2DQ5TA82 110 aaPredicted RBP11.87□□□□□ -0.51
COCH-208ENST00000555117 RPL37P61927 97 aaKnown RBP11.86□□□□□ -0.51
COCH-208ENST00000555117 VPS25Q9BRG1 176 aa11.86□□□□□ -0.51
COCH-208ENST00000555117 MT1HP80294 61 aa11.85□□□□□ -0.51
COCH-208ENST00000555117 LINC00472Q9H8W2 130 aa11.85□□□□□ -0.51
COCH-208ENST00000555117 C14orf132Q9NPU4 83 aa11.83□□□□□ -0.52
COCH-208ENST00000555117 PDE6GP18545 87 aa11.82□□□□□ -0.52
COCH-208ENST00000555117 SMCPP49901 116 aaPredicted RBP11.81□□□□□ -0.52
COCH-208ENST00000555117 K7EP34 96 aa11.79□□□□□ -0.52
COCH-208ENST00000555117 A0A1B0GW54 56 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms