RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956		H3BRM9	83 aa		2.7	□□□□□ -1.98
PSMC6-208	ENST00000554956	ERC2-IT1	O76042	136 aa		2.7	□□□□□ -1.98
PSMC6-208	ENST00000554956	G0S2	P27469	103 aa		2.7	□□□□□ -1.98
PSMC6-208	ENST00000554956	NDUFA6	P56556	154 aa		2.7	□□□□□ -1.98
PSMC6-208	ENST00000554956	LINC00313	P59037	77 aa		2.7	□□□□□ -1.98
PSMC6-208	ENST00000554956	IFITM2	Q01629	132 aa		2.7	□□□□□ -1.98
PSMC6-208	ENST00000554956	MOBP	Q13875	183 aa		2.7	□□□□□ -1.98
PSMC6-208	ENST00000554956	SMCR5	Q8TEV8	140 aa		2.7	□□□□□ -1.98
PSMC6-208	ENST00000554956	TRAPPC1	Q9Y5R8	145 aa		2.7	□□□□□ -1.98
PSMC6-208	ENST00000554956	TMEM218	A2RU14	115 aa		2.69	□□□□□ -1.98
PSMC6-208	ENST00000554956	COLCA2	A8K830	154 aa		2.69	□□□□□ -1.98
PSMC6-208	ENST00000554956		A8MUU9	505 aa		2.69	□□□□□ -1.98
PSMC6-208	ENST00000554956	SPRR1A	P35321	89 aa		2.69	□□□□□ -1.98
PSMC6-208	ENST00000554956	FABP9	Q0Z7S8	132 aa		2.69	□□□□□ -1.98
PSMC6-208	ENST00000554956	COX17	Q14061	63 aa		2.69	□□□□□ -1.98
PSMC6-208	ENST00000554956	BATF	Q16520	125 aa		2.69	□□□□□ -1.98
PSMC6-208	ENST00000554956	SPAG11A	Q6PDA7	123 aa		2.69	□□□□□ -1.98
PSMC6-208	ENST00000554956	FP248	Q71RG6	208 aa	Predicted RBP	2.69	□□□□□ -1.98
PSMC6-208	ENST00000554956	TRAV9-1	A0A075B6T8	112 aa		2.68	□□□□□ -1.98
PSMC6-208	ENST00000554956	TRBV10-3	A0A0K0K1G6	114 aa		2.68	□□□□□ -1.98
PSMC6-208	ENST00000554956	NCR3	O14931	201 aa		2.68	□□□□□ -1.98
PSMC6-208	ENST00000554956	SMIM13	P0DJ93	91 aa		2.68	□□□□□ -1.98
PSMC6-208	ENST00000554956	LINC00158	P58513	81 aa		2.68	□□□□□ -1.98
PSMC6-208	ENST00000554956	S100A12	P80511	92 aa		2.68	□□□□□ -1.98
PSMC6-208	ENST00000554956	CLLU1	Q5K131	121 aa		2.68	□□□□□ -1.98
PSMC6-208	ENST00000554956	TMEM170B	Q5T4T1	132 aa		2.68	□□□□□ -1.98
PSMC6-208	ENST00000554956	BAGE3	Q86Y29	109 aa		2.68	□□□□□ -1.98
PSMC6-208	ENST00000554956	C18orf32	Q8TCD1	76 aa		2.68	□□□□□ -1.98
PSMC6-208	ENST00000554956	KCNQ1DN	Q9H478	68 aa		2.68	□□□□□ -1.98
PSMC6-208	ENST00000554956		A0A0B4J2C4	111 aa		2.67	□□□□□ -1.98
PSMC6-208	ENST00000554956	LINC01549	A6NIU2	74 aa		2.67	□□□□□ -1.98
PSMC6-208	ENST00000554956	MT1H	P80294	61 aa		2.67	□□□□□ -1.98
PSMC6-208	ENST00000554956		Q9BRP9	147 aa		2.67	□□□□□ -1.98
PSMC6-208	ENST00000554956	SMCO4	Q9NRQ5	59 aa		2.67	□□□□□ -1.98
PSMC6-208	ENST00000554956		H3BQ85	93 aa		2.66	□□□□□ -1.98
PSMC6-208	ENST00000554956	SPINK1	P00995	79 aa		2.66	□□□□□ -1.98
PSMC6-208	ENST00000554956	HBD	P02042	147 aa		2.66	□□□□□ -1.98
PSMC6-208	ENST00000554956	TSPEAR-AS2	P59090	65 aa		2.66	□□□□□ -1.98
PSMC6-208	ENST00000554956	FSIP2	Q5CZC0	6907 aa		2.65	□□□□□ -1.98
PSMC6-208	ENST00000554956	ETDC	A0A1B0GVM5	59 aa		2.65	□□□□□ -1.99
PSMC6-208	ENST00000554956	S100P	P25815	95 aa		2.65	□□□□□ -1.99
PSMC6-208	ENST00000554956	C10orf91	Q5T1B1	145 aa		2.65	□□□□□ -1.99
PSMC6-208	ENST00000554956	SEC11C	Q9BY50	192 aa		2.65	□□□□□ -1.99
PSMC6-208	ENST00000554956	PMAIP1	Q13794	54 aa		2.64	□□□□□ -1.99
PSMC6-208	ENST00000554956	MEIG1	Q5JSS6	88 aa		2.64	□□□□□ -1.99
PSMC6-208	ENST00000554956	SOSTDC1	Q6X4U4	206 aa		2.64	□□□□□ -1.99
PSMC6-208	ENST00000554956	SSBP3-AS1	Q7Z2R9	100 aa		2.64	□□□□□ -1.99
PSMC6-208	ENST00000554956	IFI27L1	Q96BM0	104 aa		2.64	□□□□□ -1.99
PSMC6-208	ENST00000554956	NDUFA12	Q9UI09	145 aa		2.64	□□□□□ -1.99
PSMC6-208	ENST00000554956	TRAV12-1	A0A0B4J245	112 aa		2.63	□□□□□ -1.99
PSMC6-208	ENST00000554956	LOC107984156	A0A0G2JMH3	177 aa		2.63	□□□□□ -1.99
PSMC6-208	ENST00000554956	SLC25A20	O43772	301 aa		2.63	□□□□□ -1.99
PSMC6-208	ENST00000554956	RPS29	P62273	56 aa	Known RBP	2.63	□□□□□ -1.99
PSMC6-208	ENST00000554956	PCOTH	Q58A44	107 aa		2.63	□□□□□ -1.99
PSMC6-208	ENST00000554956	SPINT4	Q6UDR6	99 aa		2.63	□□□□□ -1.99
PSMC6-208	ENST00000554956	SFTA2	Q6UW10	78 aa		2.63	□□□□□ -1.99
PSMC6-208	ENST00000554956		Q6ZRX8	168 aa		2.63	□□□□□ -1.99
PSMC6-208	ENST00000554956	ARL17A	Q8IVW1	177 aa		2.63	□□□□□ -1.99
PSMC6-208	ENST00000554956	FAM19A2	Q8N3H0	131 aa		2.63	□□□□□ -1.99
PSMC6-208	ENST00000554956	C9orf92	A6NGG3	77 aa		2.62	□□□□□ -1.99
PSMC6-208	ENST00000554956	IGLV6-57	P01721	117 aa		2.62	□□□□□ -1.99
PSMC6-208	ENST00000554956	RHEB	Q15382	184 aa		2.62	□□□□□ -1.99
PSMC6-208	ENST00000554956	IGFL1	Q6UW32	110 aa		2.62	□□□□□ -1.99
PSMC6-208	ENST00000554956		A0A0G2JQZ4	141 aa		2.61	□□□□□ -1.99
PSMC6-208	ENST00000554956	TRBV10-2	A0A0K0K1G8	114 aa		2.61	□□□□□ -1.99
PSMC6-208	ENST00000554956	HRCT1	Q6UXD1	115 aa		2.61	□□□□□ -1.99
PSMC6-208	ENST00000554956	PMCHL2	Q9BQD1	86 aa		2.61	□□□□□ -1.99
PSMC6-208	ENST00000554956	MYMX	A0A1B0GTQ4	84 aa		2.6	□□□□□ -1.99
PSMC6-208	ENST00000554956		J3QQQ9	107 aa		2.6	□□□□□ -1.99
PSMC6-208	ENST00000554956	LEPROT	O15243	131 aa		2.6	□□□□□ -1.99
PSMC6-208	ENST00000554956	NPC2	P61916	151 aa		2.6	□□□□□ -1.99
PSMC6-208	ENST00000554956	C9orf153	Q5TBE3	101 aa		2.6	□□□□□ -1.99
PSMC6-208	ENST00000554956	CHCHD1	Q96BP2	118 aa	Known RBP	2.6	□□□□□ -1.99
PSMC6-208	ENST00000554956	TRAV23DV6	A0A075B6W5	121 aa		2.59	□□□□□ -1.99
PSMC6-208	ENST00000554956	ZNF73	O43830	326 aa	Predicted RBP	2.59	□□□□□ -1.99
PSMC6-208	ENST00000554956	APOC3	P02656	99 aa		2.59	□□□□□ -1.99
PSMC6-208	ENST00000554956	SPRR1B	P22528	89 aa		2.59	□□□□□ -1.99
PSMC6-208	ENST00000554956	SIGMAR1	Q99720	223 aa		2.59	□□□□□ -1.99
PSMC6-208	ENST00000554956	LINC00587	B1AMM8	73 aa		2.58	□□□□□ -2
PSMC6-208	ENST00000554956		H7C2G1	150 aa		2.58	□□□□□ -2
PSMC6-208	ENST00000554956	NDUFC2	O95298	119 aa		2.58	□□□□□ -2
PSMC6-208	ENST00000554956	S100A7L2	Q5SY68	101 aa		2.58	□□□□□ -2
PSMC6-208	ENST00000554956	C12orf57	Q99622	126 aa		2.58	□□□□□ -2
PSMC6-208	ENST00000554956	LST1	O00453	97 aa		2.57	□□□□□ -2
PSMC6-208	ENST00000554956	TRGC2	P03986	189 aa		2.57	□□□□□ -2
PSMC6-208	ENST00000554956	FABP4	P15090	132 aa		2.57	□□□□□ -2
PSMC6-208	ENST00000554956	TTTY13	Q9BZ97	58 aa		2.57	□□□□□ -2
PSMC6-208	ENST00000554956	FLG	P20930	4061 aa	Predicted RBP	2.56	□□□□□ -2
PSMC6-208	ENST00000554956	FAM236D	A0A1B0GTK5	79 aa		2.56	□□□□□ -2
PSMC6-208	ENST00000554956	DPM2	O94777	84 aa		2.56	□□□□□ -2
PSMC6-208	ENST00000554956	LEPROTL1	O95214	131 aa		2.56	□□□□□ -2
PSMC6-208	ENST00000554956	IGKC	P01834	107 aa		2.56	□□□□□ -2
PSMC6-208	ENST00000554956	FAM236C	P0DP71	79 aa		2.56	□□□□□ -2
PSMC6-208	ENST00000554956	LGALS3	P17931	250 aa	Known RBP	2.56	□□□□□ -2
PSMC6-208	ENST00000554956	KRTAP25-1	Q3LHN0	102 aa		2.56	□□□□□ -2
PSMC6-208	ENST00000554956	DEFB105A	Q8NG35	78 aa		2.56	□□□□□ -2
PSMC6-208	ENST00000554956	LINC00308	Q8TCZ7	52 aa		2.56	□□□□□ -2
PSMC6-208	ENST00000554956		A8MUN3	132 aa		2.55	□□□□□ -2
PSMC6-208	ENST00000554956		M0R2T5	61 aa		2.55	□□□□□ -2
PSMC6-208	ENST00000554956	SMIM6	P0DI80	62 aa		2.55	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms