RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 APCP25054 2843 aa2.12□□□□□ -2.07
SYNE2-212ENST00000554584 ELOF1P60002 83 aaKnown RBP2.12□□□□□ -2.07
SYNE2-212ENST00000554584 CENPFP49454 3210 aa2.12□□□□□ -2.07
SYNE2-212ENST00000554584 A0A1B0GVX0 72 aa2.11□□□□□ -2.07
SYNE2-212ENST00000554584 PRR15Q8IV56 129 aa2.11□□□□□ -2.07
SYNE2-212ENST00000554584 FAM229BQ4G0N7 80 aa2.11□□□□□ -2.07
SYNE2-212ENST00000554584 C20orf166-AS1Q96NR2 134 aa2.11□□□□□ -2.07
SYNE2-212ENST00000554584 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.11□□□□□ -2.07
SYNE2-212ENST00000554584 SPATA8Q6RVD6 105 aa2.11□□□□□ -2.07
SYNE2-212ENST00000554584 Q6ZR54 194 aa2.11□□□□□ -2.07
SYNE2-212ENST00000554584 Q5XG85 94 aa2.11□□□□□ -2.07
SYNE2-212ENST00000554584 C9orf163Q8N9P6 203 aa2.11□□□□□ -2.07
SYNE2-212ENST00000554584 Q8NAQ8 132 aa2.11□□□□□ -2.07
SYNE2-212ENST00000554584 H7BZZ5 65 aa2.1□□□□□ -2.07
SYNE2-212ENST00000554584 CYSTM1Q9H1C7 97 aa2.1□□□□□ -2.07
SYNE2-212ENST00000554584 Q8N9P0 234 aaPredicted RBP2.1□□□□□ -2.07
SYNE2-212ENST00000554584 PLAC8Q9NZF1 115 aa2.1□□□□□ -2.07
SYNE2-212ENST00000554584 R4GN34 69 aa2.1□□□□□ -2.07
SYNE2-212ENST00000554584 FP248Q71RG6 208 aaPredicted RBP2.1□□□□□ -2.07
SYNE2-212ENST00000554584 KRTAP10-2P60368 255 aa2.09□□□□□ -2.07
SYNE2-212ENST00000554584 CSAG1Q6PB30 78 aa2.09□□□□□ -2.07
SYNE2-212ENST00000554584 A0A1B0GU33 70 aa2.09□□□□□ -2.07
SYNE2-212ENST00000554584 NF1P21359 2839 aa2.09□□□□□ -2.07
SYNE2-212ENST00000554584 ADM2Q7Z4H4 148 aa2.09□□□□□ -2.08
SYNE2-212ENST00000554584 CFAP54Q96N23 3096 aa2.09□□□□□ -2.08
SYNE2-212ENST00000554584 Q1T7F1 81 aa2.09□□□□□ -2.08
SYNE2-212ENST00000554584 DMAC1Q96GE9 116 aa2.08□□□□□ -2.08
SYNE2-212ENST00000554584 KRTAP10-1P60331 282 aa2.08□□□□□ -2.08
SYNE2-212ENST00000554584 SPRR4Q96PI1 79 aa2.08□□□□□ -2.08
SYNE2-212ENST00000554584 ZNF861PO60384 105 aa2.08□□□□□ -2.08
SYNE2-212ENST00000554584 Q8N377 158 aa2.08□□□□□ -2.08
SYNE2-212ENST00000554584 C10orf95Q9H7T3 257 aa2.08□□□□□ -2.08
SYNE2-212ENST00000554584 HRES1P13985 223 aa2.07□□□□□ -2.08
SYNE2-212ENST00000554584 OXTP01178 125 aa2.07□□□□□ -2.08
SYNE2-212ENST00000554584 KCNQ1DNQ9H478 68 aa2.07□□□□□ -2.08
SYNE2-212ENST00000554584 TENM4Q6N022 2769 aa2.07□□□□□ -2.08
SYNE2-212ENST00000554584 CEP350Q5VT06 3117 aa2.07□□□□□ -2.08
SYNE2-212ENST00000554584 DNAH14Q0VDD8 3507 aa2.07□□□□□ -2.08
SYNE2-212ENST00000554584 H3BNG1 76 aa2.06□□□□□ -2.08
SYNE2-212ENST00000554584 A0A1W2PNM2 257 aa2.06□□□□□ -2.08
SYNE2-212ENST00000554584 GVQW2A0A096LPI5 108 aaPredicted RBP2.06□□□□□ -2.08
SYNE2-212ENST00000554584 FRYLO94915 3013 aa2.06□□□□□ -2.08
SYNE2-212ENST00000554584 TENM1Q9UKZ4 2725 aa2.05□□□□□ -2.08
SYNE2-212ENST00000554584 CRYBG3Q68DQ2 2970 aa2.05□□□□□ -2.08
SYNE2-212ENST00000554584 FREM2Q5SZK8 3169 aa2.05□□□□□ -2.08
SYNE2-212ENST00000554584 SRRM2Q9UQ35 2752 aaKnown RBP2.05□□□□□ -2.08
SYNE2-212ENST00000554584 SPANXA2-OT1Q8N9U9 137 aa2.04□□□□□ -2.08
SYNE2-212ENST00000554584 OCR1Q9BZK8 76 aa2.04□□□□□ -2.08
SYNE2-212ENST00000554584 ROMO1P60602 79 aa2.04□□□□□ -2.08
SYNE2-212ENST00000554584 A8MU10 97 aa2.04□□□□□ -2.08
SYNE2-212ENST00000554584 PRUNE2Q8WUY3 3088 aa2.04□□□□□ -2.08
SYNE2-212ENST00000554584 KALRNO60229 2985 aa2.04□□□□□ -2.08
SYNE2-212ENST00000554584 LAMA2P24043 3122 aaKnown RBP2.04□□□□□ -2.08
SYNE2-212ENST00000554584 CHD7Q9P2D1 2997 aa2.03□□□□□ -2.08
SYNE2-212ENST00000554584 CDH23Q9H251 3354 aa2.03□□□□□ -2.08
SYNE2-212ENST00000554584 MXRA5Q9NR99 2828 aa2.03□□□□□ -2.08
SYNE2-212ENST00000554584 Q75L30 129 aa2.03□□□□□ -2.08
SYNE2-212ENST00000554584 ZANQ9Y493 2812 aa2.03□□□□□ -2.08
SYNE2-212ENST00000554584 ZCCHC13Q8WW36 166 aaKnown RBP2.02□□□□□ -2.09
SYNE2-212ENST00000554584 DNAH12Q6ZR08 3092 aa2.02□□□□□ -2.09
SYNE2-212ENST00000554584 Q8NDZ9 215 aa2.02□□□□□ -2.09
SYNE2-212ENST00000554584 KRTAP1-1Q07627 177 aa2.02□□□□□ -2.09
SYNE2-212ENST00000554584 C5orf42Q9H799 3197 aa2.02□□□□□ -2.09
SYNE2-212ENST00000554584 LRBAP50851 2863 aa2.02□□□□□ -2.09
SYNE2-212ENST00000554584 C10orf142B7Z368 130 aa2.02□□□□□ -2.09
SYNE2-212ENST00000554584 KRTAP1-5Q9BYS1 174 aa2.02□□□□□ -2.09
SYNE2-212ENST00000554584 NBEAQ8NFP9 2946 aa2.02□□□□□ -2.09
SYNE2-212ENST00000554584 P0C880 135 aa2.01□□□□□ -2.09
SYNE2-212ENST00000554584 PANO1I0J062 215 aa2.01□□□□□ -2.09
SYNE2-212ENST00000554584 Q5VV11 94 aa2.01□□□□□ -2.09
SYNE2-212ENST00000554584 GIG44P09565 113 aaPredicted RBP2.01□□□□□ -2.09
SYNE2-212ENST00000554584 KRTAP16-1A8MUX0 517 aa2.01□□□□□ -2.09
SYNE2-212ENST00000554584 SPTBN5Q9NRC6 3674 aaKnown RBP2.01□□□□□ -2.09
SYNE2-212ENST00000554584 KRTAP1-3Q8IUG1 177 aa2□□□□□ -2.09
SYNE2-212ENST00000554584 MYO15AQ9UKN7 3530 aa2□□□□□ -2.09
SYNE2-212ENST00000554584 CRCT1Q9UGL9 99 aa2□□□□□ -2.09
SYNE2-212ENST00000554584 KRTAP10-8P60410 259 aa2□□□□□ -2.09
SYNE2-212ENST00000554584 TACC2O95359 2948 aa1.99□□□□□ -2.09
SYNE2-212ENST00000554584 ASH1LQ9NR48 2969 aaKnown RBP1.99□□□□□ -2.09
SYNE2-212ENST00000554584 LINC01558Q9Y6Z2 57 aa1.99□□□□□ -2.09
SYNE2-212ENST00000554584 SZT2Q5T011 3432 aa1.99□□□□□ -2.09
SYNE2-212ENST00000554584 DMDP11532 3685 aa1.99□□□□□ -2.09
SYNE2-212ENST00000554584 DMXL2Q8TDJ6 3036 aa1.99□□□□□ -2.09
SYNE2-212ENST00000554584 USP34Q70CQ2 3546 aa1.99□□□□□ -2.09
SYNE2-212ENST00000554584 LCE6AA0A183 80 aa1.98□□□□□ -2.09
SYNE2-212ENST00000554584 PRR34Q9NV39 138 aa1.98□□□□□ -2.09
SYNE2-212ENST00000554584 C19orf73Q9NVV2 129 aa1.98□□□□□ -2.09
SYNE2-212ENST00000554584 PKD1L1Q8TDX9 2849 aa1.98□□□□□ -2.09
SYNE2-212ENST00000554584 CNBPP62633 177 aaKnown RBP1.98□□□□□ -2.09
SYNE2-212ENST00000554584 UNC80Q8N2C7 3258 aa1.97□□□□□ -2.09
SYNE2-212ENST00000554584 Q5W150 140 aa1.97□□□□□ -2.09
SYNE2-212ENST00000554584 XIRP2A4UGR9 3374 aa1.96□□□□□ -2.1
SYNE2-212ENST00000554584 WDFY3Q8IZQ1 3526 aa1.96□□□□□ -2.1
SYNE2-212ENST00000554584 REV3LO60673 3130 aa1.95□□□□□ -2.1
SYNE2-212ENST00000554584 TRIOO75962 3097 aa1.95□□□□□ -2.1
SYNE2-212ENST00000554584 BRCA2P51587 3418 aa1.95□□□□□ -2.1
SYNE2-212ENST00000554584 LAMA3Q16787 3333 aa1.95□□□□□ -2.1
SYNE2-212ENST00000554584 VCANP13611 3396 aa1.95□□□□□ -2.1
SYNE2-212ENST00000554584 SPRR1BP22528 89 aa1.94□□□□□ -2.1
SYNE2-212ENST00000554584 TGP01266 2768 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms