RNA–Protein interactions for RNA: ENST00000554534.5

PCNX4-208, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 357 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-208ENST00000554534 PLNP26678 52 aa3.43□□□□□ -1.86
PCNX4-208ENST00000554534 NMUP48645 174 aa3.43□□□□□ -1.86
PCNX4-208ENST00000554534 C14orf144Q96I85 54 aa3.43□□□□□ -1.86
PCNX4-208ENST00000554534 HIST1H2BLQ99880 126 aa3.43□□□□□ -1.86
PCNX4-208ENST00000554534 SPANXCQ9NY87 97 aa3.43□□□□□ -1.86
PCNX4-208ENST00000554534 ATP11AUNQ6ZP68 121 aa3.42□□□□□ -1.86
PCNX4-208ENST00000554534 A6NDN8 102 aa3.41□□□□□ -1.86
PCNX4-208ENST00000554534 E9PLD3 99 aa3.41□□□□□ -1.86
PCNX4-208ENST00000554534 M0R143 59 aa3.41□□□□□ -1.86
PCNX4-208ENST00000554534 MT1FP04733 61 aa3.41□□□□□ -1.86
PCNX4-208ENST00000554534 Q5XG85 94 aa3.41□□□□□ -1.86
PCNX4-208ENST00000554534 Q96NJ1 140 aa3.41□□□□□ -1.86
PCNX4-208ENST00000554534 SPANXDQ9BXN6 97 aa3.41□□□□□ -1.86
PCNX4-208ENST00000554534 ZNF815PA8K554 130 aa3.4□□□□□ -1.87
PCNX4-208ENST00000554534 TCL1BO95988 128 aa3.4□□□□□ -1.87
PCNX4-208ENST00000554534 HSPB8Q9UJY1 196 aa3.4□□□□□ -1.87
PCNX4-208ENST00000554534 SYNE2Q8WXH0 6885 aaKnown RBP3.4□□□□□ -1.87
PCNX4-208ENST00000554534 IGLV5-48A0A075B6I7 105 aa3.39□□□□□ -1.87
PCNX4-208ENST00000554534 CFC1P0CG37 223 aa3.39□□□□□ -1.87
PCNX4-208ENST00000554534 A0A1B0GV90 55 aa3.38□□□□□ -1.87
PCNX4-208ENST00000554534 C20orf202A1L168 122 aa3.38□□□□□ -1.87
PCNX4-208ENST00000554534 KRTAP16-1A8MUX0 517 aa3.38□□□□□ -1.87
PCNX4-208ENST00000554534 KRTAP10-10P60014 251 aa3.38□□□□□ -1.87
PCNX4-208ENST00000554534 MUSTN1Q8IVN3 82 aa3.38□□□□□ -1.87
PCNX4-208ENST00000554534 KRTAP9-3Q9BYQ3 159 aa3.38□□□□□ -1.87
PCNX4-208ENST00000554534 CBY1Q9Y3M2 126 aa3.38□□□□□ -1.87
PCNX4-208ENST00000554534 SYS1-DBNDD2H3BUS1 97 aa3.37□□□□□ -1.87
PCNX4-208ENST00000554534 SCGB1D1O95968 90 aa3.37□□□□□ -1.87
PCNX4-208ENST00000554534 IGFL1Q6UW32 110 aa3.37□□□□□ -1.87
PCNX4-208ENST00000554534 Q75L30 129 aa3.37□□□□□ -1.87
PCNX4-208ENST00000554534 SMIM11BQ8TCY0 68 aa3.37□□□□□ -1.87
PCNX4-208ENST00000554534 MACF1Q9UPN3 7388 aaKnown RBP3.36□□□□□ -1.87
PCNX4-208ENST00000554534 TRBV7-7A0A0K0K1E9 115 aa3.36□□□□□ -1.87
PCNX4-208ENST00000554534 A0A1B0GWB2 263 aa3.36□□□□□ -1.87
PCNX4-208ENST00000554534 H3BUT2 72 aa3.36□□□□□ -1.87
PCNX4-208ENST00000554534 TIMM17BO60830 172 aa3.36□□□□□ -1.87
PCNX4-208ENST00000554534 COL5A1-AS1Q5SY13 56 aa3.36□□□□□ -1.87
PCNX4-208ENST00000554534 VAMP8Q9BV40 100 aa3.36□□□□□ -1.87
PCNX4-208ENST00000554534 TRBV7-6A0A0J9YX20 115 aa3.35□□□□□ -1.87
PCNX4-208ENST00000554534 FAM236DA0A1B0GTK5 79 aa3.35□□□□□ -1.87
PCNX4-208ENST00000554534 F8WEM9 126 aa3.35□□□□□ -1.87
PCNX4-208ENST00000554534 DLEU1O43261 78 aa3.35□□□□□ -1.87
PCNX4-208ENST00000554534 FAM236CP0DP71 79 aa3.35□□□□□ -1.87
PCNX4-208ENST00000554534 DSCR10P59022 87 aa3.35□□□□□ -1.87
PCNX4-208ENST00000554534 PET117Q6UWS5 81 aa3.35□□□□□ -1.87
PCNX4-208ENST00000554534 SCGB1D4Q6XE38 83 aa3.35□□□□□ -1.87
PCNX4-208ENST00000554534 ATOH7Q8N100 152 aa3.35□□□□□ -1.87
PCNX4-208ENST00000554534 SNHG12Q9BXW3 62 aa3.35□□□□□ -1.87
PCNX4-208ENST00000554534 TRBV20-1A0A075B6N2 111 aa3.34□□□□□ -1.87
PCNX4-208ENST00000554534 Q6ZQY7 126 aa3.34□□□□□ -1.87
PCNX4-208ENST00000554534 UQCR10Q9UDW1 63 aa3.34□□□□□ -1.87
PCNX4-208ENST00000554534 LST1O00453 97 aa3.33□□□□□ -1.88
PCNX4-208ENST00000554534 C3orf79P0CE67 100 aa3.33□□□□□ -1.88
PCNX4-208ENST00000554534 OCIAD2Q56VL3 154 aa3.33□□□□□ -1.88
PCNX4-208ENST00000554534 LINC01545Q5VT33 79 aa3.33□□□□□ -1.88
PCNX4-208ENST00000554534 LOC100996750A0A140TA64 210 aa3.32□□□□□ -1.88
PCNX4-208ENST00000554534 A8MUU9 505 aa3.32□□□□□ -1.88
PCNX4-208ENST00000554534 KRTDAPP60985 99 aa3.32□□□□□ -1.88
PCNX4-208ENST00000554534 LINC00575Q6W349 94 aa3.32□□□□□ -1.88
PCNX4-208ENST00000554534 C20orf166-AS1Q96NR2 134 aa3.32□□□□□ -1.88
PCNX4-208ENST00000554534 KRTAP4-6Q9BYQ5 205 aa3.32□□□□□ -1.88
PCNX4-208ENST00000554534 hADV29S1A0JD25 119 aa3.31□□□□□ -1.88
PCNX4-208ENST00000554534 CLEC2BQ92478 149 aa3.31□□□□□ -1.88
PCNX4-208ENST00000554534 SPATA45Q537H7 98 aa3.3□□□□□ -1.88
PCNX4-208ENST00000554534 Q6JHZ5 121 aa3.3□□□□□ -1.88
PCNX4-208ENST00000554534 NOTCH2NLQ7Z3S9 236 aa3.3□□□□□ -1.88
PCNX4-208ENST00000554534 NHP2Q9NX24 153 aaKnown RBP3.3□□□□□ -1.88
PCNX4-208ENST00000554534 PAM16Q9Y3D7 125 aa3.3□□□□□ -1.88
PCNX4-208ENST00000554534 TRAV13-2A0A0B4J235 113 aa3.29□□□□□ -1.88
PCNX4-208ENST00000554534 A4D1N5 150 aa3.29□□□□□ -1.88
PCNX4-208ENST00000554534 HSBP1L1C9JCN9 74 aa3.29□□□□□ -1.88
PCNX4-208ENST00000554534 IFITM1P13164 125 aa3.29□□□□□ -1.88
PCNX4-208ENST00000554534 HRES1P13985 223 aa3.29□□□□□ -1.88
PCNX4-208ENST00000554534 VAMP3Q15836 100 aa3.29□□□□□ -1.88
PCNX4-208ENST00000554534 DEFB116Q30KQ4 102 aa3.29□□□□□ -1.88
PCNX4-208ENST00000554534 UBE2V1Q13404 147 aa3.28□□□□□ -1.88
PCNX4-208ENST00000554534 A0A087WSZ3 146 aa3.27□□□□□ -1.89
PCNX4-208ENST00000554534 A0A1B0GV72 72 aa3.27□□□□□ -1.89
PCNX4-208ENST00000554534 KRTAP19-6Q3LI70 58 aa3.27□□□□□ -1.89
PCNX4-208ENST00000554534 SIGMAR1Q99720 223 aa3.27□□□□□ -1.89
PCNX4-208ENST00000554534 K7ERU9 68 aa3.26□□□□□ -1.89
PCNX4-208ENST00000554534 PCP4P48539 62 aa3.26□□□□□ -1.89
PCNX4-208ENST00000554534 BATFQ16520 125 aa3.26□□□□□ -1.89
PCNX4-208ENST00000554534 MPLKIPQ8TAP9 179 aa3.26□□□□□ -1.89
PCNX4-208ENST00000554534 Q8N9P0 234 aaPredicted RBP3.25□□□□□ -1.89
PCNX4-208ENST00000554534 COPS9Q8WXC6 57 aa3.25□□□□□ -1.89
PCNX4-208ENST00000554534 RBM12B-AS1Q9P1G2 102 aa3.25□□□□□ -1.89
PCNX4-208ENST00000554534 LINC00313P59037 77 aa3.24□□□□□ -1.89
PCNX4-208ENST00000554534 KRTAP6-3Q3LI67 103 aa3.24□□□□□ -1.89
PCNX4-208ENST00000554534 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.24□□□□□ -1.89
PCNX4-208ENST00000554534 GTF2H5Q6ZYL4 71 aa3.24□□□□□ -1.89
PCNX4-208ENST00000554534 A0A1W2PNM2 257 aa3.23□□□□□ -1.89
PCNX4-208ENST00000554534 IGKV4-1P06312 121 aa3.23□□□□□ -1.89
PCNX4-208ENST00000554534 COX8AP10176 69 aa3.23□□□□□ -1.89
PCNX4-208ENST00000554534 NDUFV3P56181 108 aaKnown RBP3.23□□□□□ -1.89
PCNX4-208ENST00000554534 BVES-AS1Q5T3Y7 98 aa3.23□□□□□ -1.89
PCNX4-208ENST00000554534 Q6ZVH6 145 aa3.23□□□□□ -1.89
PCNX4-208ENST00000554534 FAM218AQ96MZ4 157 aa3.23□□□□□ -1.89
PCNX4-208ENST00000554534 HSD52Q0P140 79 aa3.22□□□□□ -1.89
PCNX4-208ENST00000554534 TEN1Q86WV5 123 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms