RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 ICOSQ9Y6W8 199 aa1.77□□□□□ -2.13
PRPF39-206ENST00000554429 PKHD1P08F94 4074 aa1.77□□□□□ -2.13
PRPF39-206ENST00000554429 TRAV7A0A075B6U4 112 aa1.77□□□□□ -2.13
PRPF39-206ENST00000554429 A0A1B0GVX0 72 aa1.77□□□□□ -2.13
PRPF39-206ENST00000554429 CTSGP08311 255 aa1.77□□□□□ -2.13
PRPF39-206ENST00000554429 TRBV10-3A0A0K0K1G6 114 aa1.76□□□□□ -2.13
PRPF39-206ENST00000554429 C11orf86A6NJI1 115 aa1.76□□□□□ -2.13
PRPF39-206ENST00000554429 CFC1P0CG37 223 aa1.76□□□□□ -2.13
PRPF39-206ENST00000554429 Q6JHZ5 121 aa1.76□□□□□ -2.13
PRPF39-206ENST00000554429 TRBV7-3A0A075B6L6 115 aa1.76□□□□□ -2.13
PRPF39-206ENST00000554429 TRAV23DV6A0A075B6W5 121 aa1.76□□□□□ -2.13
PRPF39-206ENST00000554429 H3BRN7 92 aa1.76□□□□□ -2.13
PRPF39-206ENST00000554429 P0C880 135 aa1.76□□□□□ -2.13
PRPF39-206ENST00000554429 MIR22HGQ0VDD5 57 aa1.76□□□□□ -2.13
PRPF39-206ENST00000554429 HIGD2BQ4VC39 106 aa1.76□□□□□ -2.13
PRPF39-206ENST00000554429 PSMG4Q5JS54 123 aa1.76□□□□□ -2.13
PRPF39-206ENST00000554429 CYP4F30PQ9H0H9 118 aa1.76□□□□□ -2.13
PRPF39-206ENST00000554429 UBE2D4Q9Y2X8 147 aa1.76□□□□□ -2.13
PRPF39-206ENST00000554429 A0A087X002 238 aa1.75□□□□□ -2.13
PRPF39-206ENST00000554429 INSP01308 110 aa1.75□□□□□ -2.13
PRPF39-206ENST00000554429 ASB16-AS1Q495Z4 193 aa1.75□□□□□ -2.13
PRPF39-206ENST00000554429 RHPN1-AS1Q9BWJ2 59 aa1.75□□□□□ -2.13
PRPF39-206ENST00000554429 APOBP04114 4563 aaKnown RBP1.75□□□□□ -2.13
PRPF39-206ENST00000554429 A8MUU9 505 aa1.75□□□□□ -2.13
PRPF39-206ENST00000554429 UBE2D1P51668 147 aa1.75□□□□□ -2.13
PRPF39-206ENST00000554429 CSAG1Q6PB30 78 aa1.75□□□□□ -2.13
PRPF39-206ENST00000554429 GFRA4Q9GZZ7 299 aa1.75□□□□□ -2.13
PRPF39-206ENST00000554429 NEBP20929 6669 aa1.74□□□□□ -2.13
PRPF39-206ENST00000554429 IGHV3-53P01767 116 aa1.74□□□□□ -2.13
PRPF39-206ENST00000554429 KRTAP1-5Q9BYS1 174 aa1.74□□□□□ -2.13
PRPF39-206ENST00000554429 DEFB131BA0A096LNP1 70 aa1.74□□□□□ -2.13
PRPF39-206ENST00000554429 F8VRH5 84 aa1.74□□□□□ -2.13
PRPF39-206ENST00000554429 H3BNG1 76 aa1.74□□□□□ -2.13
PRPF39-206ENST00000554429 H7C423 109 aa1.74□□□□□ -2.13
PRPF39-206ENST00000554429 BCE1O60756 84 aa1.74□□□□□ -2.13
PRPF39-206ENST00000554429 SPINK13Q1W4C9 94 aa1.74□□□□□ -2.13
PRPF39-206ENST00000554429 C9orf47Q6ZRZ4 202 aa1.74□□□□□ -2.13
PRPF39-206ENST00000554429 NTM-AS1Q6ZSK4 140 aa1.74□□□□□ -2.13
PRPF39-206ENST00000554429 Q6ZTC4 211 aa1.74□□□□□ -2.13
PRPF39-206ENST00000554429 MUSTN1Q8IVN3 82 aa1.74□□□□□ -2.13
PRPF39-206ENST00000554429 LYPD1Q8N2G4 141 aa1.74□□□□□ -2.13
PRPF39-206ENST00000554429 MIR7-3HGQ8N6C7 128 aa1.74□□□□□ -2.13
PRPF39-206ENST00000554429 LINC00612Q8N6U2 182 aa1.74□□□□□ -2.13
PRPF39-206ENST00000554429 PRR15LQ9BU68 103 aa1.74□□□□□ -2.13
PRPF39-206ENST00000554429 CHCHD7Q9BUK0 85 aa1.74□□□□□ -2.13
PRPF39-206ENST00000554429 PKHD1L1Q86WI1 4243 aa1.74□□□□□ -2.13
PRPF39-206ENST00000554429 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.74□□□□□ -2.13
PRPF39-206ENST00000554429 NDUFAF8A1L188 74 aa1.74□□□□□ -2.13
PRPF39-206ENST00000554429 IGKV2-29A2NJV5 120 aaPredicted RBP1.74□□□□□ -2.13
PRPF39-206ENST00000554429 SPART-AS1P0CW21 52 aa1.74□□□□□ -2.13
PRPF39-206ENST00000554429 DNAH10OSP0CZ25 163 aa1.74□□□□□ -2.13
PRPF39-206ENST00000554429 KRTAP5-7Q6L8G8 165 aa1.74□□□□□ -2.13
PRPF39-206ENST00000554429 CAMK2N1Q7Z7J9 78 aa1.74□□□□□ -2.13
PRPF39-206ENST00000554429 C20orf166-AS1Q96NR2 134 aa1.74□□□□□ -2.13
PRPF39-206ENST00000554429 SMIM2Q9BVW6 85 aa1.74□□□□□ -2.13
PRPF39-206ENST00000554429 LRP1BQ9NZR2 4599 aa1.73□□□□□ -2.13
PRPF39-206ENST00000554429 IGLV2-18A0A075B6J9 118 aa1.73□□□□□ -2.13
PRPF39-206ENST00000554429 PSCAO43653 123 aa1.73□□□□□ -2.13
PRPF39-206ENST00000554429 DEFB131AP59861 70 aa1.73□□□□□ -2.13
PRPF39-206ENST00000554429 LIMD2Q9BT23 127 aa1.73□□□□□ -2.13
PRPF39-206ENST00000554429 DNAH8Q96JB1 4490 aa1.73□□□□□ -2.13
PRPF39-206ENST00000554429 IGLV1-50A0A075B6I6 118 aa1.73□□□□□ -2.13
PRPF39-206ENST00000554429 A0A0J9YY99 117 aa1.73□□□□□ -2.13
PRPF39-206ENST00000554429 NBDYA0A0U1RRE5 68 aa1.73□□□□□ -2.13
PRPF39-206ENST00000554429 BPY2O14599 106 aa1.73□□□□□ -2.13
PRPF39-206ENST00000554429 IGLV4-69A0A075B6H9 119 aa1.72□□□□□ -2.13
PRPF39-206ENST00000554429 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.72□□□□□ -2.13
PRPF39-206ENST00000554429 PLNP26678 52 aa1.72□□□□□ -2.13
PRPF39-206ENST00000554429 LINC00467Q9BRT7 94 aa1.72□□□□□ -2.13
PRPF39-206ENST00000554429 CDC42SE2Q9NRR3 84 aa1.72□□□□□ -2.13
PRPF39-206ENST00000554429 TMEM14CQ9P0S9 112 aa1.72□□□□□ -2.13
PRPF39-206ENST00000554429 TOMM7Q9P0U1 55 aa1.72□□□□□ -2.13
PRPF39-206ENST00000554429 DNAH5Q8TE73 4624 aa1.72□□□□□ -2.13
PRPF39-206ENST00000554429 RNASE3P12724 160 aaKnown RBP1.72□□□□□ -2.13
PRPF39-206ENST00000554429 Q6ZRN7 208 aaPredicted RBP1.72□□□□□ -2.13
PRPF39-206ENST00000554429 C15orf56Q8N910 161 aa1.72□□□□□ -2.13
PRPF39-206ENST00000554429 Q8N9P0 234 aaPredicted RBP1.72□□□□□ -2.13
PRPF39-206ENST00000554429 MUC2Q02817 5179 aa1.72□□□□□ -2.13
PRPF39-206ENST00000554429 TRBV6-8A0A0A6YYG3 113 aa1.71□□□□□ -2.14
PRPF39-206ENST00000554429 IGHV3-30P01768 117 aa1.71□□□□□ -2.14
PRPF39-206ENST00000554429 IGHV3-30-5P0DP03 117 aa1.71□□□□□ -2.14
PRPF39-206ENST00000554429 CLPSL2Q6UWE3 100 aa1.71□□□□□ -2.14
PRPF39-206ENST00000554429 A0A096LPF7 62 aa1.71□□□□□ -2.14
PRPF39-206ENST00000554429 A0A0J9YX75 114 aa1.71□□□□□ -2.14
PRPF39-206ENST00000554429 COX6CP09669 75 aa1.71□□□□□ -2.14
PRPF39-206ENST00000554429 SMIM29Q86T20 159 aa1.71□□□□□ -2.14
PRPF39-206ENST00000554429 TRAV12-1A0A0B4J245 112 aa1.71□□□□□ -2.14
PRPF39-206ENST00000554429 IGHV3-33P01772 117 aa1.71□□□□□ -2.14
PRPF39-206ENST00000554429 PDE6HQ13956 83 aa1.71□□□□□ -2.14
PRPF39-206ENST00000554429 C9orf129Q5T035 196 aaKnown RBP1.71□□□□□ -2.14
PRPF39-206ENST00000554429 TMEM254Q8TBM7 123 aa1.71□□□□□ -2.14
PRPF39-206ENST00000554429 TRAV21A0A0B4J279 112 aa1.7□□□□□ -2.14
PRPF39-206ENST00000554429 TRBV7-4A0A0J9YYF1 115 aa1.7□□□□□ -2.14
PRPF39-206ENST00000554429 DEFB4AO15263 64 aa1.7□□□□□ -2.14
PRPF39-206ENST00000554429 DNAL4O96015 105 aa1.7□□□□□ -2.14
PRPF39-206ENST00000554429 LINC00483Q53H64 154 aa1.7□□□□□ -2.14
PRPF39-206ENST00000554429 UBE2DNLQ8IWF7 75 aa1.7□□□□□ -2.14
PRPF39-206ENST00000554429 LINC00167Q96N53 147 aa1.7□□□□□ -2.14
PRPF39-206ENST00000554429 CDKN2A-AS1Q9UH64 79 aa1.7□□□□□ -2.14
PRPF39-206ENST00000554429 IGIPA6NJ69 53 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms