RNA–Protein interactions for RNA: ENST00000553927.1

RPGRIP1-204, Transcript of RPGR interacting protein 1, humanhuman

TSL 2

Gene RPGRIP1, Length 2,875 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1-204ENST00000553927 TEP1Q99973 2627 aaKnown RBP4.34□□□□□ -1.71
RPGRIP1-204ENST00000553927 KRTAP10-3P60369 221 aa4.34□□□□□ -1.72
RPGRIP1-204ENST00000553927 SPAG11AQ6PDA7 123 aa4.34□□□□□ -1.72
RPGRIP1-204ENST00000553927 Q8NAQ8 132 aa4.34□□□□□ -1.72
RPGRIP1-204ENST00000553927 SPART-AS1P0CW21 52 aa4.33□□□□□ -1.72
RPGRIP1-204ENST00000553927 KRTAP26-1Q6PEX3 210 aa4.33□□□□□ -1.72
RPGRIP1-204ENST00000553927 ANK3Q12955 4377 aaKnown RBP4.33□□□□□ -1.72
RPGRIP1-204ENST00000553927 A0A096LNI7 61 aa4.33□□□□□ -1.72
RPGRIP1-204ENST00000553927 IGFL1Q6UW32 110 aa4.33□□□□□ -1.72
RPGRIP1-204ENST00000553927 COA5Q86WW8 74 aa4.33□□□□□ -1.72
RPGRIP1-204ENST00000553927 SPRR4Q96PI1 79 aa4.33□□□□□ -1.72
RPGRIP1-204ENST00000553927 DHRS4-AS1Q9P1J3 65 aa4.33□□□□□ -1.72
RPGRIP1-204ENST00000553927 PRLHP81277 87 aa4.32□□□□□ -1.72
RPGRIP1-204ENST00000553927 TENM1Q9UKZ4 2725 aa4.32□□□□□ -1.72
RPGRIP1-204ENST00000553927 LIMD2Q9BT23 127 aa4.32□□□□□ -1.72
RPGRIP1-204ENST00000553927 CASC10Q5T4H9 136 aa4.32□□□□□ -1.72
RPGRIP1-204ENST00000553927 CASC2Q6XLA1 102 aa4.32□□□□□ -1.72
RPGRIP1-204ENST00000553927 A6NN06 94 aa4.31□□□□□ -1.72
RPGRIP1-204ENST00000553927 KRTAP7-1Q8IUC3 87 aa4.31□□□□□ -1.72
RPGRIP1-204ENST00000553927 KRTAP1-3Q8IUG1 177 aa4.31□□□□□ -1.72
RPGRIP1-204ENST00000553927 FLNBO75369 2602 aaKnown RBP4.31□□□□□ -1.72
RPGRIP1-204ENST00000553927 IGLV1-50A0A075B6I6 118 aa4.3□□□□□ -1.72
RPGRIP1-204ENST00000553927 KRTAP4-16G5E9R7 235 aaPredicted RBP4.3□□□□□ -1.72
RPGRIP1-204ENST00000553927 LORP23490 312 aaPredicted RBP4.3□□□□□ -1.72
RPGRIP1-204ENST00000553927 FBN1P35555 2871 aaKnown RBP4.3□□□□□ -1.72
RPGRIP1-204ENST00000553927 APOC4P55056 127 aa4.3□□□□□ -1.72
RPGRIP1-204ENST00000553927 ATP11AUNQ6ZP68 121 aa4.3□□□□□ -1.72
RPGRIP1-204ENST00000553927 PRAC1Q96KF2 57 aa4.3□□□□□ -1.72
RPGRIP1-204ENST00000553927 HELZ2Q9BYK8 2649 aaKnown RBP4.29□□□□□ -1.72
RPGRIP1-204ENST00000553927 SPINK7P58062 85 aa4.29□□□□□ -1.72
RPGRIP1-204ENST00000553927 MOBPQ13875 183 aa4.29□□□□□ -1.72
RPGRIP1-204ENST00000553927 H0Y9J4 135 aa4.29□□□□□ -1.72
RPGRIP1-204ENST00000553927 CNBPP62633 177 aaKnown RBP4.29□□□□□ -1.72
RPGRIP1-204ENST00000553927 Q75L30 129 aa4.29□□□□□ -1.72
RPGRIP1-204ENST00000553927 ATRQ13535 2644 aa4.28□□□□□ -1.72
RPGRIP1-204ENST00000553927 SMR3AQ99954 134 aa4.28□□□□□ -1.72
RPGRIP1-204ENST00000553927 TENM3Q9P273 2699 aa4.28□□□□□ -1.72
RPGRIP1-204ENST00000553927 KRTAP29-1A8MX34 341 aaPredicted RBP4.28□□□□□ -1.73
RPGRIP1-204ENST00000553927 IGKV2-24A0A0C4DH68 120 aa4.27□□□□□ -1.73
RPGRIP1-204ENST00000553927 LOC101927531A0A1B0GV80 90 aa4.27□□□□□ -1.73
RPGRIP1-204ENST00000553927 NOTCH2Q04721 2471 aa4.27□□□□□ -1.73
RPGRIP1-204ENST00000553927 LOC100996750A0A140TA64 210 aa4.27□□□□□ -1.73
RPGRIP1-204ENST00000553927 C7orf65Q6ZTY9 151 aa4.27□□□□□ -1.73
RPGRIP1-204ENST00000553927 KRTAP4-6Q9BYQ5 205 aa4.27□□□□□ -1.73
RPGRIP1-204ENST00000553927 A0A1B0GW54 56 aa4.26□□□□□ -1.73
RPGRIP1-204ENST00000553927 NDUFS5O43920 106 aa4.26□□□□□ -1.73
RPGRIP1-204ENST00000553927 REG3GQ6UW15 175 aa4.26□□□□□ -1.73
RPGRIP1-204ENST00000553927 ADM2Q7Z4H4 148 aa4.26□□□□□ -1.73
RPGRIP1-204ENST00000553927 C9orf163Q8N9P6 203 aa4.26□□□□□ -1.73
RPGRIP1-204ENST00000553927 CDC42SE1Q9NRR8 79 aa4.26□□□□□ -1.73
RPGRIP1-204ENST00000553927 ITPR2Q14571 2701 aa4.26□□□□□ -1.73
RPGRIP1-204ENST00000553927 SPANXA2-OT1Q8N9U9 137 aa4.26□□□□□ -1.73
RPGRIP1-204ENST00000553927 SPRR1AP35321 89 aa4.25□□□□□ -1.73
RPGRIP1-204ENST00000553927 PHF5AQ7RTV0 110 aaKnown RBP4.24□□□□□ -1.73
RPGRIP1-204ENST00000553927 COL7A1Q02388 2944 aa4.24□□□□□ -1.73
RPGRIP1-204ENST00000553927 MAST4O15021 2626 aa4.24□□□□□ -1.73
RPGRIP1-204ENST00000553927 C8orf87E5RJ46 101 aa4.23□□□□□ -1.73
RPGRIP1-204ENST00000553927 LINC00313P59037 77 aa4.23□□□□□ -1.73
RPGRIP1-204ENST00000553927 KRTAP1-1Q07627 177 aa4.23□□□□□ -1.73
RPGRIP1-204ENST00000553927 A8MWP4 228 aa4.22□□□□□ -1.73
RPGRIP1-204ENST00000553927 IGLV7-46A0A075B6I9 117 aa4.22□□□□□ -1.73
RPGRIP1-204ENST00000553927 IGLV5-37A0A075B6J1 123 aa4.2□□□□□ -1.74
RPGRIP1-204ENST00000553927 MMP24-AS1A0A0U1RRL7 71 aa4.2□□□□□ -1.74
RPGRIP1-204ENST00000553927 HRES1P13985 223 aa4.2□□□□□ -1.74
RPGRIP1-204ENST00000553927 LINC01556Q5JQF7 62 aa4.2□□□□□ -1.74
RPGRIP1-204ENST00000553927 KRTAP11-1Q8IUC1 163 aa4.2□□□□□ -1.74
RPGRIP1-204ENST00000553927 HECTD1Q9ULT8 2610 aa4.2□□□□□ -1.74
RPGRIP1-204ENST00000553927 TENM2Q9NT68 2774 aa4.2□□□□□ -1.74
RPGRIP1-204ENST00000553927 DEFB131BA0A096LNP1 70 aa4.2□□□□□ -1.74
RPGRIP1-204ENST00000553927 H3BPC8 53 aa4.2□□□□□ -1.74
RPGRIP1-204ENST00000553927 LINC00472Q9H8W2 130 aa4.2□□□□□ -1.74
RPGRIP1-204ENST00000553927 LINC01558Q9Y6Z2 57 aa4.2□□□□□ -1.74
RPGRIP1-204ENST00000553927 K7EIL1 84 aa4.19□□□□□ -1.74
RPGRIP1-204ENST00000553927 CHTF8P0CG12 524 aa4.19□□□□□ -1.74
RPGRIP1-204ENST00000553927 TENM4Q6N022 2769 aa4.19□□□□□ -1.74
RPGRIP1-204ENST00000553927 TLX1NBP0CAT3 122 aa4.19□□□□□ -1.74
RPGRIP1-204ENST00000553927 IGHV6-1A0A0B4J1U7 121 aa4.18□□□□□ -1.74
RPGRIP1-204ENST00000553927 IGLV9-49A0A0B4J1Y8 123 aa4.17□□□□□ -1.74
RPGRIP1-204ENST00000553927 PLAC8Q9NZF1 115 aa4.16□□□□□ -1.74
RPGRIP1-204ENST00000553927 COL6A5A8TX70 2615 aa4.16□□□□□ -1.74
RPGRIP1-204ENST00000553927 ANK2Q01484 3957 aa4.16□□□□□ -1.74
RPGRIP1-204ENST00000553927 DNAH10Q8IVF4 4471 aa4.16□□□□□ -1.74
RPGRIP1-204ENST00000553927 NOTCH1P46531 2555 aa4.16□□□□□ -1.74
RPGRIP1-204ENST00000553927 IGLV8-61A0A075B6I0 122 aa4.15□□□□□ -1.75
RPGRIP1-204ENST00000553927 A0A087X002 238 aa4.15□□□□□ -1.75
RPGRIP1-204ENST00000553927 NOTCH2NLQ7Z3S9 236 aa4.15□□□□□ -1.75
RPGRIP1-204ENST00000553927 NSD1Q96L73 2696 aaPredicted RBP4.15□□□□□ -1.75
RPGRIP1-204ENST00000553927 LYSTQ99698 3801 aa4.14□□□□□ -1.75
RPGRIP1-204ENST00000553927 DNAH10OSP0CZ25 163 aa4.14□□□□□ -1.75
RPGRIP1-204ENST00000553927 H3BNG1 76 aa4.13□□□□□ -1.75
RPGRIP1-204ENST00000553927 C8orf17Q9NRJ1 99 aa4.13□□□□□ -1.75
RPGRIP1-204ENST00000553927 KRTAP10-11P60412 298 aa4.12□□□□□ -1.75
RPGRIP1-204ENST00000553927 RETNLBQ9BQ08 111 aa4.12□□□□□ -1.75
RPGRIP1-204ENST00000553927 INAFM1C9JVW0 142 aa4.12□□□□□ -1.75
RPGRIP1-204ENST00000553927 LINC01554Q52M75 96 aa4.12□□□□□ -1.75
RPGRIP1-204ENST00000553927 ANAPC11Q9NYG5 84 aa4.12□□□□□ -1.75
RPGRIP1-204ENST00000553927 SPINK6Q6UWN8 80 aa4.11□□□□□ -1.75
RPGRIP1-204ENST00000553927 Q96NJ1 140 aa4.11□□□□□ -1.75
RPGRIP1-204ENST00000553927 NBEAL1Q6ZS30 2694 aa4.11□□□□□ -1.75
RPGRIP1-204ENST00000553927 Q5W150 140 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms