RNA–Protein interactions for RNA: ENST00000553904.1

FOXN3-205, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 337 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-205ENST00000553904 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.56□□□□□ -1.84
FOXN3-205ENST00000553904 C12orf57Q99622 126 aa3.56□□□□□ -1.84
FOXN3-205ENST00000553904 Q6ZQY7 126 aa3.55□□□□□ -1.84
FOXN3-205ENST00000553904 RNF213Q63HN8 5207 aa3.55□□□□□ -1.84
FOXN3-205ENST00000553904 H0YGX0 51 aa3.54□□□□□ -1.84
FOXN3-205ENST00000553904 CLEC2BQ92478 149 aa3.54□□□□□ -1.84
FOXN3-205ENST00000553904 KRTAP4-1Q9BYQ7 146 aa3.54□□□□□ -1.84
FOXN3-205ENST00000553904 DLEU1O43261 78 aa3.53□□□□□ -1.84
FOXN3-205ENST00000553904 COX8AP10176 69 aa3.53□□□□□ -1.84
FOXN3-205ENST00000553904 RAB37Q96AX2 223 aa3.53□□□□□ -1.84
FOXN3-205ENST00000553904 A0A0G2JQZ4 141 aa3.52□□□□□ -1.85
FOXN3-205ENST00000553904 TRBV7-7A0A0K0K1E9 115 aa3.52□□□□□ -1.85
FOXN3-205ENST00000553904 CFC1BP0CG36 223 aa3.52□□□□□ -1.85
FOXN3-205ENST00000553904 TMEM238LA0A1B0GVL6 79 aa3.51□□□□□ -1.85
FOXN3-205ENST00000553904 A6NJY4 79 aa3.51□□□□□ -1.85
FOXN3-205ENST00000553904 LST1O00453 97 aa3.51□□□□□ -1.85
FOXN3-205ENST00000553904 RPL37P61927 97 aaKnown RBP3.51□□□□□ -1.85
FOXN3-205ENST00000553904 IGFL1Q6UW32 110 aa3.51□□□□□ -1.85
FOXN3-205ENST00000553904 ATP11AUNQ6ZP68 121 aa3.51□□□□□ -1.85
FOXN3-205ENST00000553904 HIGD1BQ9P298 99 aa3.51□□□□□ -1.85
FOXN3-205ENST00000553904 SS18L2Q9UHA2 77 aa3.51□□□□□ -1.85
FOXN3-205ENST00000553904 A0A1B0GX51 115 aa3.5□□□□□ -1.85
FOXN3-205ENST00000553904 H3BQ85 93 aa3.5□□□□□ -1.85
FOXN3-205ENST00000553904 TEN1Q86WV5 123 aa3.5□□□□□ -1.85
FOXN3-205ENST00000553904 MUC2Q02817 5179 aa3.49□□□□□ -1.85
FOXN3-205ENST00000553904 A0A0B4J2C4 111 aa3.49□□□□□ -1.85
FOXN3-205ENST00000553904 CFC1P0CG37 223 aa3.49□□□□□ -1.85
FOXN3-205ENST00000553904 NDUFV3P56181 108 aaKnown RBP3.49□□□□□ -1.85
FOXN3-205ENST00000553904 SPATA45Q537H7 98 aa3.49□□□□□ -1.85
FOXN3-205ENST00000553904 LCE2DQ5TA82 110 aaPredicted RBP3.49□□□□□ -1.85
FOXN3-205ENST00000553904 COX6B2Q6YFQ2 88 aa3.49□□□□□ -1.85
FOXN3-205ENST00000553904 C14orf144Q96I85 54 aa3.49□□□□□ -1.85
FOXN3-205ENST00000553904 VAMP8Q9BV40 100 aa3.49□□□□□ -1.85
FOXN3-205ENST00000553904 M0R2T5 61 aa3.48□□□□□ -1.85
FOXN3-205ENST00000553904 Q6Q795 121 aa3.48□□□□□ -1.85
FOXN3-205ENST00000553904 PRO1854Q9UHT4 67 aa3.48□□□□□ -1.85
FOXN3-205ENST00000553904 PAM16Q9Y3D7 125 aa3.48□□□□□ -1.85
FOXN3-205ENST00000553904 KRTAP9-6A0A140TA67 174 aa3.47□□□□□ -1.85
FOXN3-205ENST00000553904 H3BMG7 143 aa3.47□□□□□ -1.85
FOXN3-205ENST00000553904 Q75L30 129 aa3.47□□□□□ -1.85
FOXN3-205ENST00000553904 CEND1Q8N111 149 aa3.47□□□□□ -1.85
FOXN3-205ENST00000553904 OBSCN-AS1Q96MR7 158 aa3.47□□□□□ -1.85
FOXN3-205ENST00000553904 H3BUT2 72 aa3.46□□□□□ -1.86
FOXN3-205ENST00000553904 DNAL4O96015 105 aa3.46□□□□□ -1.86
FOXN3-205ENST00000553904 COX6CP09669 75 aa3.46□□□□□ -1.86
FOXN3-205ENST00000553904 FABP2P12104 132 aa3.46□□□□□ -1.86
FOXN3-205ENST00000553904 LCE2CQ5TA81 110 aa3.46□□□□□ -1.86
FOXN3-205ENST00000553904 Q96NJ1 140 aa3.46□□□□□ -1.86
FOXN3-205ENST00000553904 TMEM256-PLSCR3K7ERE1 68 aa3.45□□□□□ -1.86
FOXN3-205ENST00000553904 MT1HP80294 61 aa3.45□□□□□ -1.86
FOXN3-205ENST00000553904 TRBV20-1A0A075B6N2 111 aa3.44□□□□□ -1.86
FOXN3-205ENST00000553904 PSMB2P49721 201 aa3.44□□□□□ -1.86
FOXN3-205ENST00000553904 ANKRD29Q8N6D5 301 aa3.44□□□□□ -1.86
FOXN3-205ENST00000553904 A0A087WSZ3 146 aa3.43□□□□□ -1.86
FOXN3-205ENST00000553904 KRTAP19-2Q3LHN2 52 aa3.43□□□□□ -1.86
FOXN3-205ENST00000553904 ORMDL1Q9P0S3 153 aa3.43□□□□□ -1.86
FOXN3-205ENST00000553904 TRBV7-4A0A0J9YYF1 115 aa3.42□□□□□ -1.86
FOXN3-205ENST00000553904 LINC00313P59037 77 aa3.42□□□□□ -1.86
FOXN3-205ENST00000553904 C2orf91Q6ZV80 131 aa3.42□□□□□ -1.86
FOXN3-205ENST00000553904 FAM218AQ96MZ4 157 aa3.42□□□□□ -1.86
FOXN3-205ENST00000553904 MUC17Q685J3 4493 aa3.42□□□□□ -1.86
FOXN3-205ENST00000553904 TRIAP1O43715 76 aa3.41□□□□□ -1.86
FOXN3-205ENST00000553904 HSD52Q0P140 79 aa3.41□□□□□ -1.86
FOXN3-205ENST00000553904 C21orf62-AS1Q17RA5 79 aa3.41□□□□□ -1.86
FOXN3-205ENST00000553904 C20orf166-AS1Q96NR2 134 aa3.41□□□□□ -1.86
FOXN3-205ENST00000553904 A8MUU9 505 aa3.4□□□□□ -1.87
FOXN3-205ENST00000553904 TRACP01848 142 aa3.4□□□□□ -1.87
FOXN3-205ENST00000553904 IGKV4-1P06312 121 aa3.4□□□□□ -1.87
FOXN3-205ENST00000553904 SCGB1C2P0DMR2 95 aa3.4□□□□□ -1.87
FOXN3-205ENST00000553904 FXYD2P54710 66 aa3.4□□□□□ -1.87
FOXN3-205ENST00000553904 KRTAP10-6P60371 365 aaPredicted RBP3.4□□□□□ -1.87
FOXN3-205ENST00000553904 LORP23490 312 aaPredicted RBP3.39□□□□□ -1.87
FOXN3-205ENST00000553904 UBE2V1Q13404 147 aa3.39□□□□□ -1.87
FOXN3-205ENST00000553904 SIGMAR1Q99720 223 aa3.39□□□□□ -1.87
FOXN3-205ENST00000553904 UQCR10Q9UDW1 63 aa3.39□□□□□ -1.87
FOXN3-205ENST00000553904 CRCT1Q9UGL9 99 aa3.39□□□□□ -1.87
FOXN3-205ENST00000553904 A0A1W2PNM2 257 aa3.38□□□□□ -1.87
FOXN3-205ENST00000553904 CCKP06307 115 aa3.38□□□□□ -1.87
FOXN3-205ENST00000553904 RBM3P98179 157 aaKnown RBP3.38□□□□□ -1.87
FOXN3-205ENST00000553904 DSCR8Q96T75 97 aa3.38□□□□□ -1.87
FOXN3-205ENST00000553904 FAT4Q6V0I7 4981 aa3.38□□□□□ -1.87
FOXN3-205ENST00000553904 DSCR10P59022 87 aa3.37□□□□□ -1.87
FOXN3-205ENST00000553904 PYY3Q5JQD4 70 aa3.37□□□□□ -1.87
FOXN3-205ENST00000553904 MTURNQ8N3F0 131 aa3.36□□□□□ -1.87
FOXN3-205ENST00000553904 RBM12B-AS1Q9P1G2 102 aa3.36□□□□□ -1.87
FOXN3-205ENST00000553904 FAM236DA0A1B0GTK5 79 aa3.35□□□□□ -1.87
FOXN3-205ENST00000553904 C9JAW5 83 aa3.35□□□□□ -1.87
FOXN3-205ENST00000553904 C8orf87E5RJ46 101 aa3.35□□□□□ -1.87
FOXN3-205ENST00000553904 J3KT08 172 aa3.35□□□□□ -1.87
FOXN3-205ENST00000553904 NDUFB1O75438 58 aa3.35□□□□□ -1.87
FOXN3-205ENST00000553904 FAM236CP0DP71 79 aa3.35□□□□□ -1.87
FOXN3-205ENST00000553904 VPS25Q9BRG1 176 aa3.35□□□□□ -1.87
FOXN3-205ENST00000553904 LINC00472Q9H8W2 130 aa3.35□□□□□ -1.87
FOXN3-205ENST00000553904 IGHV6-1A0A0B4J1U7 121 aa3.34□□□□□ -1.87
FOXN3-205ENST00000553904 A0A1B0GV72 72 aa3.34□□□□□ -1.87
FOXN3-205ENST00000553904 A0A1B0GW54 56 aa3.34□□□□□ -1.87
FOXN3-205ENST00000553904 BAALC-AS2P0C853 105 aa3.34□□□□□ -1.87
FOXN3-205ENST00000553904 DEFB116Q30KQ4 102 aa3.34□□□□□ -1.87
FOXN3-205ENST00000553904 JMJD7-PLA2G4BH0Y9G9 81 aa3.33□□□□□ -1.88
FOXN3-205ENST00000553904 K7ERJ3 54 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms