RNA–Protein interactions for RNA: ENST00000553175.5

LETMD1-237, Transcript of LETM1 domain containing 1, humanhuman

TSL 4

Gene LETMD1, Length 555 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-237ENST00000553175 LINC00483Q53H64 154 aa2.25□□□□□ -2.05
LETMD1-237ENST00000553175 PCOTHQ58A44 107 aa2.25□□□□□ -2.05
LETMD1-237ENST00000553175 ROS1P08922 2347 aa2.25□□□□□ -2.05
LETMD1-237ENST00000553175 PRUNE2Q8WUY3 3088 aa2.25□□□□□ -2.05
LETMD1-237ENST00000553175 CHD7Q9P2D1 2997 aa2.25□□□□□ -2.05
LETMD1-237ENST00000553175 PCNX1Q96RV3 2341 aa2.24□□□□□ -2.05
LETMD1-237ENST00000553175 LAMA2P24043 3122 aaKnown RBP2.24□□□□□ -2.05
LETMD1-237ENST00000553175 XIRP2A4UGR9 3374 aa2.24□□□□□ -2.05
LETMD1-237ENST00000553175 USP34Q70CQ2 3546 aa2.23□□□□□ -2.05
LETMD1-237ENST00000553175 C8orf17Q9NRJ1 99 aa2.23□□□□□ -2.05
LETMD1-237ENST00000553175 NCOR1O75376 2440 aa2.23□□□□□ -2.05
LETMD1-237ENST00000553175 SDK1Q7Z5N4 2213 aa2.22□□□□□ -2.05
LETMD1-237ENST00000553175 FRYQ5TBA9 3013 aa2.22□□□□□ -2.05
LETMD1-237ENST00000553175 MGAQ8IWI9 3026 aa2.22□□□□□ -2.05
LETMD1-237ENST00000553175 LINC00304Q8N9R0 145 aa2.22□□□□□ -2.05
LETMD1-237ENST00000553175 MRPL34Q9BQ48 92 aaKnown RBP2.22□□□□□ -2.05
LETMD1-237ENST00000553175 GPR179Q6PRD1 2367 aa2.22□□□□□ -2.05
LETMD1-237ENST00000553175 EYSQ5T1H1 3165 aa2.22□□□□□ -2.05
LETMD1-237ENST00000553175 CNOT1A5YKK6 2376 aaKnown RBP2.21□□□□□ -2.06
LETMD1-237ENST00000553175 NUPR2A6NF83 97 aa2.21□□□□□ -2.06
LETMD1-237ENST00000553175 DEFB130BP0DP73 79 aa2.21□□□□□ -2.06
LETMD1-237ENST00000553175 DEFB130AP0DP74 79 aa2.21□□□□□ -2.06
LETMD1-237ENST00000553175 Q5W150 140 aa2.21□□□□□ -2.06
LETMD1-237ENST00000553175 Q96NJ1 140 aa2.21□□□□□ -2.06
LETMD1-237ENST00000553175 C20orf166-AS1Q96NR2 134 aa2.21□□□□□ -2.06
LETMD1-237ENST00000553175 ZDBF2Q9HCK1 2354 aa2.21□□□□□ -2.06
LETMD1-237ENST00000553175 MAP1BP46821 2468 aaKnown RBP2.2□□□□□ -2.06
LETMD1-237ENST00000553175 TPRP12270 2363 aaKnown RBP2.2□□□□□ -2.06
LETMD1-237ENST00000553175 H3BNG1 76 aa2.2□□□□□ -2.06
LETMD1-237ENST00000553175 DEFB136Q30KP8 78 aa2.2□□□□□ -2.06
LETMD1-237ENST00000553175 APC2O95996 2303 aa2.2□□□□□ -2.06
LETMD1-237ENST00000553175 CFAP54Q96N23 3096 aa2.19□□□□□ -2.06
LETMD1-237ENST00000553175 KALRNO60229 2985 aa2.19□□□□□ -2.06
LETMD1-237ENST00000553175 EP300Q09472 2414 aaPredicted RBP2.18□□□□□ -2.06
LETMD1-237ENST00000553175 BDP1A6H8Y1 2624 aa2.18□□□□□ -2.06
LETMD1-237ENST00000553175 C5orf42Q9H799 3197 aa2.18□□□□□ -2.06
LETMD1-237ENST00000553175 A0A096LPF7 62 aa2.18□□□□□ -2.06
LETMD1-237ENST00000553175 A0A0G2JQZ4 141 aa2.18□□□□□ -2.06
LETMD1-237ENST00000553175 A0A1W2PNN7 141 aa2.18□□□□□ -2.06
LETMD1-237ENST00000553175 LY6G6CO95867 125 aa2.18□□□□□ -2.06
LETMD1-237ENST00000553175 CIRBP-AS1Q8TBR5 109 aa2.18□□□□□ -2.06
LETMD1-237ENST00000553175 CCL19Q99731 98 aa2.18□□□□□ -2.06
LETMD1-237ENST00000553175 RP1L1Q8IWN7 2480 aaPredicted RBP2.18□□□□□ -2.06
LETMD1-237ENST00000553175 PTPRZ1P23471 2315 aaPredicted RBP2.18□□□□□ -2.06
LETMD1-237ENST00000553175 COL6A6A6NMZ7 2263 aa2.17□□□□□ -2.06
LETMD1-237ENST00000553175 CDH23Q9H251 3354 aa2.17□□□□□ -2.06
LETMD1-237ENST00000553175 FRYLO94915 3013 aa2.17□□□□□ -2.06
LETMD1-237ENST00000553175 A0A087WTM6 91 aa2.17□□□□□ -2.06
LETMD1-237ENST00000553175 K7ERS5 55 aa2.17□□□□□ -2.06
LETMD1-237ENST00000553175 DEFB113Q30KQ7 82 aa2.17□□□□□ -2.06
LETMD1-237ENST00000553175 LUZP6Q538Z0 58 aa2.17□□□□□ -2.06
LETMD1-237ENST00000553175 TRIOO75962 3097 aa2.17□□□□□ -2.06
LETMD1-237ENST00000553175 ZFHX4Q86UP3 3567 aa2.17□□□□□ -2.06
LETMD1-237ENST00000553175 AKAP13Q12802 2813 aa2.17□□□□□ -2.06
LETMD1-237ENST00000553175 VPS13AQ96RL7 3174 aa2.16□□□□□ -2.06
LETMD1-237ENST00000553175 EPG5Q9HCE0 2579 aa2.16□□□□□ -2.06
LETMD1-237ENST00000553175 AKAP6Q13023 2319 aa2.16□□□□□ -2.06
LETMD1-237ENST00000553175 CFAP47Q6ZTR5 3102 aa2.16□□□□□ -2.06
LETMD1-237ENST00000553175 UNC79Q9P2D8 2635 aa2.16□□□□□ -2.06
LETMD1-237ENST00000553175 DSPP15924 2871 aaKnown RBP2.16□□□□□ -2.06
LETMD1-237ENST00000553175 DCHS1Q96JQ0 3298 aa2.15□□□□□ -2.06
LETMD1-237ENST00000553175 CACNA1HO95180 2353 aa2.15□□□□□ -2.06
LETMD1-237ENST00000553175 DMDP11532 3685 aa2.15□□□□□ -2.07
LETMD1-237ENST00000553175 FAM208BQ5VWN6 2430 aa2.15□□□□□ -2.07
LETMD1-237ENST00000553175 SPART-AS1P0CW21 52 aa2.15□□□□□ -2.07
LETMD1-237ENST00000553175 LINC01556Q5JQF7 62 aa2.15□□□□□ -2.07
LETMD1-237ENST00000553175 Q6ZSA8 131 aa2.15□□□□□ -2.07
LETMD1-237ENST00000553175 SPTBN4Q9H254 2564 aa2.15□□□□□ -2.07
LETMD1-237ENST00000553175 WDFY3Q8IZQ1 3526 aa2.15□□□□□ -2.07
LETMD1-237ENST00000553175 C2CD3Q4AC94 2353 aa2.15□□□□□ -2.07
LETMD1-237ENST00000553175 USP24Q9UPU5 2620 aa2.15□□□□□ -2.07
LETMD1-237ENST00000553175 PIEZO2Q9H5I5 2752 aa2.14□□□□□ -2.07
LETMD1-237ENST00000553175 K7EIL1 84 aa2.14□□□□□ -2.07
LETMD1-237ENST00000553175 DEFB124Q8NES8 71 aa2.14□□□□□ -2.07
LETMD1-237ENST00000553175 H0YAA0 97 aa2.13□□□□□ -2.07
LETMD1-237ENST00000553175 CHD8Q9HCK8 2581 aa2.13□□□□□ -2.07
LETMD1-237ENST00000553175 ANKHD1Q8IWZ3 2542 aaKnown RBP2.13□□□□□ -2.07
LETMD1-237ENST00000553175 CHD6Q8TD26 2715 aa2.12□□□□□ -2.07
LETMD1-237ENST00000553175 ABCA2Q9BZC7 2435 aa2.12□□□□□ -2.07
LETMD1-237ENST00000553175 REV3LO60673 3130 aa2.12□□□□□ -2.07
LETMD1-237ENST00000553175 FASNP49327 2511 aaKnown RBP2.12□□□□□ -2.07
LETMD1-237ENST00000553175 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.12□□□□□ -2.071e-7■■■■□ 24
LETMD1-237ENST00000553175 HIVEP2P31629 2446 aa2.11□□□□□ -2.07
LETMD1-237ENST00000553175 CREBBPQ92793 2442 aa2.11□□□□□ -2.07
LETMD1-237ENST00000553175 FREM2Q5SZK8 3169 aa2.11□□□□□ -2.07
LETMD1-237ENST00000553175 ACACBO00763 2458 aa2.11□□□□□ -2.07
LETMD1-237ENST00000553175 SETXQ7Z333 2677 aaKnown RBP2.11□□□□□ -2.07
LETMD1-237ENST00000553175 A0A1B0GU33 70 aa2.11□□□□□ -2.07
LETMD1-237ENST00000553175 PRLHP81277 87 aa2.11□□□□□ -2.07
LETMD1-237ENST00000553175 SPINT4Q6UDR6 99 aa2.11□□□□□ -2.07
LETMD1-237ENST00000553175 KRTAP13-1Q8IUC0 172 aa2.11□□□□□ -2.07
LETMD1-237ENST00000553175 MAST4O15021 2626 aa2.11□□□□□ -2.07
LETMD1-237ENST00000553175 NCOR2Q9Y618 2525 aa2.11□□□□□ -2.07
LETMD1-237ENST00000553175 ASH1LQ9NR48 2969 aaKnown RBP2.1□□□□□ -2.07
LETMD1-237ENST00000553175 WDFY4Q6ZS81 3184 aa2.1□□□□□ -2.07
LETMD1-237ENST00000553175 ANKRD17O75179 2603 aaKnown RBP2.1□□□□□ -2.07
LETMD1-237ENST00000553175 GVINP1Q7Z2Y8 2422 aa2.1□□□□□ -2.07
LETMD1-237ENST00000553175 LAMA1P25391 3075 aa2.1□□□□□ -2.07
LETMD1-237ENST00000553175 TACC2O95359 2948 aa2.1□□□□□ -2.07
LETMD1-237ENST00000553175 ZNF462Q96JM2 2506 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 231.2 ms