RNA–Protein interactions for RNA: ENST00000552428.6

R3HDM2-214, Transcript of R3H domain containing 2, humanhuman

TSL 5

Gene R3HDM2, Length 430 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-214ENST00000552428 ACACAQ13085 2346 aa3.28□□□□□ -1.88
R3HDM2-214ENST00000552428 TRIOBPQ9H2D6 2365 aa3.27□□□□□ -1.89
R3HDM2-214ENST00000552428 ANKRD17O75179 2603 aaKnown RBP3.27□□□□□ -1.89
R3HDM2-214ENST00000552428 PTPRZ1P23471 2315 aaPredicted RBP3.27□□□□□ -1.89
R3HDM2-214ENST00000552428 CFAP54Q96N23 3096 aa3.25□□□□□ -1.89
R3HDM2-214ENST00000552428 RPL37P61927 97 aaKnown RBP3.25□□□□□ -1.89
R3HDM2-214ENST00000552428 PRLHP81277 87 aa3.25□□□□□ -1.89
R3HDM2-214ENST00000552428 LCE1EQ5T753 118 aa3.25□□□□□ -1.89
R3HDM2-214ENST00000552428 C2CD3Q4AC94 2353 aa3.25□□□□□ -1.89
R3HDM2-214ENST00000552428 CACNA1HO95180 2353 aa3.23□□□□□ -1.89
R3HDM2-214ENST00000552428 ANKHD1Q8IWZ3 2542 aaKnown RBP3.23□□□□□ -1.89
R3HDM2-214ENST00000552428 TRANK1O15050 2925 aa3.23□□□□□ -1.89
R3HDM2-214ENST00000552428 TPRXLQ17RH7 258 aa3.23□□□□□ -1.89
R3HDM2-214ENST00000552428 NOTCH3Q9UM47 2321 aa3.23□□□□□ -1.89
R3HDM2-214ENST00000552428 NCOR1O75376 2440 aa3.23□□□□□ -1.89
R3HDM2-214ENST00000552428 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.22□□□□□ -1.89
R3HDM2-214ENST00000552428 K7EIL1 84 aa3.22□□□□□ -1.89
R3HDM2-214ENST00000552428 MKI67P46013 3256 aaKnown RBP3.22□□□□□ -1.89
R3HDM2-214ENST00000552428 DNAH14Q0VDD8 3507 aa3.22□□□□□ -1.89
R3HDM2-214ENST00000552428 SPTA1P02549 2419 aa3.21□□□□□ -1.9
R3HDM2-214ENST00000552428 CREBBPQ92793 2442 aa3.21□□□□□ -1.9
R3HDM2-214ENST00000552428 XIRP2A4UGR9 3374 aa3.21□□□□□ -1.9
R3HDM2-214ENST00000552428 DEFB124Q8NES8 71 aa3.2□□□□□ -1.9
R3HDM2-214ENST00000552428 CHD7Q9P2D1 2997 aa3.19□□□□□ -1.9
R3HDM2-214ENST00000552428 FRYQ5TBA9 3013 aa3.19□□□□□ -1.9
R3HDM2-214ENST00000552428 CFAP47Q6ZTR5 3102 aa3.19□□□□□ -1.9
R3HDM2-214ENST00000552428 KRTAP13-1Q8IUC0 172 aa3.19□□□□□ -1.9
R3HDM2-214ENST00000552428 FRYLO94915 3013 aa3.18□□□□□ -1.9
R3HDM2-214ENST00000552428 KRTAP5-11Q6L8G4 156 aa3.18□□□□□ -1.9
R3HDM2-214ENST00000552428 PIEZO2Q9H5I5 2752 aa3.18□□□□□ -1.9
R3HDM2-214ENST00000552428 KALRNO60229 2985 aa3.18□□□□□ -1.9
R3HDM2-214ENST00000552428 CHD9Q3L8U1 2897 aa3.18□□□□□ -1.9
R3HDM2-214ENST00000552428 HTTP42858 3142 aa3.17□□□□□ -1.9
R3HDM2-214ENST00000552428 HTN3P15516 51 aa3.17□□□□□ -1.9
R3HDM2-214ENST00000552428 KRTAP10-3P60369 221 aa3.17□□□□□ -1.9
R3HDM2-214ENST00000552428 PLAC4Q8WY50 150 aa3.17□□□□□ -1.9
R3HDM2-214ENST00000552428 SPTBN5Q9NRC6 3674 aaKnown RBP3.16□□□□□ -1.9
R3HDM2-214ENST00000552428 KRTAP10-5P60370 271 aa3.16□□□□□ -1.9
R3HDM2-214ENST00000552428 TRIOO75962 3097 aa3.15□□□□□ -1.9
R3HDM2-214ENST00000552428 PRO2289Q9P1D8 64 aa3.15□□□□□ -1.91
R3HDM2-214ENST00000552428 ABCA2Q9BZC7 2435 aa3.15□□□□□ -1.91
R3HDM2-214ENST00000552428 IGF2RP11717 2491 aa3.15□□□□□ -1.91
R3HDM2-214ENST00000552428 A0A096LNI7 61 aa3.14□□□□□ -1.91
R3HDM2-214ENST00000552428 SPINK1P00995 79 aa3.14□□□□□ -1.91
R3HDM2-214ENST00000552428 DEFB135Q30KP9 77 aa3.14□□□□□ -1.91
R3HDM2-214ENST00000552428 ZDBF2Q9HCK1 2354 aa3.14□□□□□ -1.91
R3HDM2-214ENST00000552428 PRUNE2Q8WUY3 3088 aa3.13□□□□□ -1.91
R3HDM2-214ENST00000552428 WDFY4Q6ZS81 3184 aa3.13□□□□□ -1.91
R3HDM2-214ENST00000552428 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.13□□□□□ -1.91
R3HDM2-214ENST00000552428 USP34Q70CQ2 3546 aa3.13□□□□□ -1.91
R3HDM2-214ENST00000552428 AKAP13Q12802 2813 aa3.13□□□□□ -1.91
R3HDM2-214ENST00000552428 SPTBN4Q9H254 2564 aa3.12□□□□□ -1.91
R3HDM2-214ENST00000552428 MAP1AP78559 2803 aaPredicted RBP3.12□□□□□ -1.91
R3HDM2-214ENST00000552428 C5orf42Q9H799 3197 aa3.11□□□□□ -1.91
R3HDM2-214ENST00000552428 SPG11Q96JI7 2443 aa3.11□□□□□ -1.91
R3HDM2-214ENST00000552428 CHD6Q8TD26 2715 aa3.11□□□□□ -1.91
R3HDM2-214ENST00000552428 LAMA2P24043 3122 aaKnown RBP3.1□□□□□ -1.91
R3HDM2-214ENST00000552428 TENM2Q9NT68 2774 aa3.1□□□□□ -1.91
R3HDM2-214ENST00000552428 NBASA2RRP1 2371 aa3.1□□□□□ -1.91
R3HDM2-214ENST00000552428 SPTAN1Q13813 2472 aaKnown RBP3.09□□□□□ -1.91
R3HDM2-214ENST00000552428 SPINK6Q6UWN8 80 aa3.09□□□□□ -1.91
R3HDM2-214ENST00000552428 GVINP1Q7Z2Y8 2422 aa3.09□□□□□ -1.92
R3HDM2-214ENST00000552428 NCOR2Q9Y618 2525 aa3.09□□□□□ -1.92
R3HDM2-214ENST00000552428 DSPP15924 2871 aaKnown RBP3.08□□□□□ -1.92
R3HDM2-214ENST00000552428 DEFB4AO15263 64 aa3.08□□□□□ -1.92
R3HDM2-214ENST00000552428 ITPR1Q14643 2758 aa3.08□□□□□ -1.92
R3HDM2-214ENST00000552428 CSPG4Q6UVK1 2322 aa3.08□□□□□ -1.92
R3HDM2-214ENST00000552428 DCHS1Q96JQ0 3298 aa3.07□□□□□ -1.92
R3HDM2-214ENST00000552428 CEP290O15078 2479 aa3.06□□□□□ -1.92
R3HDM2-214ENST00000552428 INE1O15225 51 aa3.06□□□□□ -1.92
R3HDM2-214ENST00000552428 Q6ZRN7 208 aaPredicted RBP3.05□□□□□ -1.92
R3HDM2-214ENST00000552428 DEFB123Q8N688 67 aa3.05□□□□□ -1.92
R3HDM2-214ENST00000552428 C10orf95Q9H7T3 257 aa3.05□□□□□ -1.92
R3HDM2-214ENST00000552428 DMDP11532 3685 aa3.05□□□□□ -1.92
R3HDM2-214ENST00000552428 FREM2Q5SZK8 3169 aa3.04□□□□□ -1.92
R3HDM2-214ENST00000552428 LCE3EQ5T5B0 92 aa3.04□□□□□ -1.92
R3HDM2-214ENST00000552428 S4R3F8 94 aa3.04□□□□□ -1.92
R3HDM2-214ENST00000552428 LAMA3Q16787 3333 aa3.03□□□□□ -1.92
R3HDM2-214ENST00000552428 LAMA1P25391 3075 aa3.03□□□□□ -1.92
R3HDM2-214ENST00000552428 UBE2DNLQ8IWF7 75 aa3.03□□□□□ -1.92
R3HDM2-214ENST00000552428 FLG2Q5D862 2391 aaPredicted RBP3.02□□□□□ -1.93
R3HDM2-214ENST00000552428 KRTAP13-2Q52LG2 175 aa3.02□□□□□ -1.93
R3HDM2-214ENST00000552428 TACC2O95359 2948 aa3.02□□□□□ -1.93
R3HDM2-214ENST00000552428 BRCA2P51587 3418 aa3.02□□□□□ -1.93
R3HDM2-214ENST00000552428 KRTAP12-2P59991 146 aa3.01□□□□□ -1.93
R3HDM2-214ENST00000552428 PP632Q6XCG6 107 aa3.01□□□□□ -1.93
R3HDM2-214ENST00000552428 DMXL2Q8TDJ6 3036 aa3.01□□□□□ -1.93
R3HDM2-214ENST00000552428 WDFY3Q8IZQ1 3526 aa3.01□□□□□ -1.93
R3HDM2-214ENST00000552428 APLNQ9ULZ1 77 aa3□□□□□ -1.93
R3HDM2-214ENST00000552428 R4GN34 69 aa3□□□□□ -1.93
R3HDM2-214ENST00000552428 TLN1Q9Y490 2541 aaKnown RBP3□□□□□ -1.93
R3HDM2-214ENST00000552428 CELSR2Q9HCU4 2923 aa2.99□□□□□ -1.93
R3HDM2-214ENST00000552428 ZFHX4Q86UP3 3567 aa2.99□□□□□ -1.93
R3HDM2-214ENST00000552428 RIF1Q5UIP0 2472 aaKnown RBP2.99□□□□□ -1.93
R3HDM2-214ENST00000552428 ASH1LQ9NR48 2969 aaKnown RBP2.99□□□□□ -1.93
R3HDM2-214ENST00000552428 REV3LO60673 3130 aa2.99□□□□□ -1.93
R3HDM2-214ENST00000552428 BOD1L1Q8NFC6 3051 aa2.99□□□□□ -1.93
R3HDM2-214ENST00000552428 PRRC2CQ9Y520 2896 aaKnown RBP2.98□□□□□ -1.93
R3HDM2-214ENST00000552428 VCANP13611 3396 aa2.98□□□□□ -1.93
R3HDM2-214ENST00000552428 SPEGQ15772 3267 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 176.9 ms