RNA–Protein interactions for RNA: ENST00000551425.1

PTCH1-222, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 241 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-222ENST00000551425 OR13C6PQ8NH95 151 aa6.3□□□□□ -1.4
PTCH1-222ENST00000551425 TRAV13-2A0A0B4J235 113 aa6.29□□□□□ -1.4
PTCH1-222ENST00000551425 TRBV10-3A0A0K0K1G6 114 aa6.29□□□□□ -1.4
PTCH1-222ENST00000551425 TMEM238LA0A1B0GVL6 79 aa6.28□□□□□ -1.4
PTCH1-222ENST00000551425 A6NJY4 79 aa6.28□□□□□ -1.4
PTCH1-222ENST00000551425 RPL37P61927 97 aaKnown RBP6.28□□□□□ -1.4
PTCH1-222ENST00000551425 LIMD2Q9BT23 127 aa6.28□□□□□ -1.4
PTCH1-222ENST00000551425 A6NDN8 102 aa6.27□□□□□ -1.41
PTCH1-222ENST00000551425 B5MCH6 92 aa6.27□□□□□ -1.41
PTCH1-222ENST00000551425 C9orf153Q5TBE3 101 aa6.27□□□□□ -1.41
PTCH1-222ENST00000551425 TRAV23DV6A0A075B6W5 121 aa6.26□□□□□ -1.41
PTCH1-222ENST00000551425 FXYD2P54710 66 aa6.25□□□□□ -1.41
PTCH1-222ENST00000551425 RAB37Q96AX2 223 aa6.25□□□□□ -1.41
PTCH1-222ENST00000551425 Q9BRP9 147 aa6.25□□□□□ -1.41
PTCH1-222ENST00000551425 A0A0B4J2C4 111 aa6.24□□□□□ -1.41
PTCH1-222ENST00000551425 HINT1P49773 126 aaPredicted RBP6.24□□□□□ -1.41
PTCH1-222ENST00000551425 LCE2BO14633 110 aa6.23□□□□□ -1.41
PTCH1-222ENST00000551425 ZNF73O43830 326 aaPredicted RBP6.23□□□□□ -1.41
PTCH1-222ENST00000551425 BVES-AS1Q5T3Y7 98 aa6.23□□□□□ -1.41
PTCH1-222ENST00000551425 M0R143 59 aa6.22□□□□□ -1.41
PTCH1-222ENST00000551425 Q6Q795 121 aa6.22□□□□□ -1.41
PTCH1-222ENST00000551425 Q6ZRX8 168 aa6.22□□□□□ -1.41
PTCH1-222ENST00000551425 SMIM11BQ8TCY0 68 aa6.21□□□□□ -1.42
PTCH1-222ENST00000551425 NHP2Q9NX24 153 aaKnown RBP6.21□□□□□ -1.42
PTCH1-222ENST00000551425 PRO1854Q9UHT4 67 aa6.21□□□□□ -1.42
PTCH1-222ENST00000551425 TRBV7-6A0A0J9YX20 115 aa6.2□□□□□ -1.42
PTCH1-222ENST00000551425 C6orf99Q4VX62 202 aa6.2□□□□□ -1.42
PTCH1-222ENST00000551425 A0A1B0GWB2 263 aa6.19□□□□□ -1.42
PTCH1-222ENST00000551425 VAMP3Q15836 100 aa6.19□□□□□ -1.42
PTCH1-222ENST00000551425 HRCT1Q6UXD1 115 aa6.19□□□□□ -1.42
PTCH1-222ENST00000551425 H7C2G1 150 aa6.18□□□□□ -1.42
PTCH1-222ENST00000551425 COX7BP24311 80 aa6.18□□□□□ -1.42
PTCH1-222ENST00000551425 Q1RN00 199 aa6.18□□□□□ -1.42
PTCH1-222ENST00000551425 KRTAP6-3Q3LI67 103 aa6.18□□□□□ -1.42
PTCH1-222ENST00000551425 MT2AP02795 61 aa6.17□□□□□ -1.42
PTCH1-222ENST00000551425 ELOF1P60002 83 aaKnown RBP6.17□□□□□ -1.42
PTCH1-222ENST00000551425 LINC00846Q9NV44 126 aa6.17□□□□□ -1.42
PTCH1-222ENST00000551425 K7ERJ3 54 aa6.16□□□□□ -1.42
PTCH1-222ENST00000551425 DHRS4-AS1Q9P1J3 65 aa6.16□□□□□ -1.42
PTCH1-222ENST00000551425 CD164Q04900 197 aa6.15□□□□□ -1.42
PTCH1-222ENST00000551425 BATFQ16520 125 aa6.15□□□□□ -1.42
PTCH1-222ENST00000551425 Q5XG85 94 aa6.15□□□□□ -1.42
PTCH1-222ENST00000551425 ST20-AS1Q8NBB2 130 aa6.15□□□□□ -1.42
PTCH1-222ENST00000551425 KRTAP9-3Q9BYQ3 159 aa6.15□□□□□ -1.42
PTCH1-222ENST00000551425 H0YGX0 51 aa6.14□□□□□ -1.43
PTCH1-222ENST00000551425 C1orf195Q5TG92 126 aa6.14□□□□□ -1.43
PTCH1-222ENST00000551425 SPRR1BP22528 89 aa6.13□□□□□ -1.43
PTCH1-222ENST00000551425 PSMB2P49721 201 aa6.13□□□□□ -1.43
PTCH1-222ENST00000551425 PCP4L1A6NKN8 68 aa6.12□□□□□ -1.43
PTCH1-222ENST00000551425 SNCGO76070 127 aa6.12□□□□□ -1.43
PTCH1-222ENST00000551425 MT1FP04733 61 aa6.12□□□□□ -1.43
PTCH1-222ENST00000551425 COX6CP09669 75 aa6.12□□□□□ -1.43
PTCH1-222ENST00000551425 KRTAP19-6Q3LI70 58 aa6.12□□□□□ -1.43
PTCH1-222ENST00000551425 LINC00575Q6W349 94 aa6.12□□□□□ -1.43
PTCH1-222ENST00000551425 TRIAP1O43715 76 aa6.11□□□□□ -1.43
PTCH1-222ENST00000551425 hADV29S1A0JD25 119 aa6.1□□□□□ -1.43
PTCH1-222ENST00000551425 SCGB1C2P0DMR2 95 aa6.1□□□□□ -1.43
PTCH1-222ENST00000551425 SNHG12Q9BXW3 62 aa6.09□□□□□ -1.43
PTCH1-222ENST00000551425 A0A1B0GX51 115 aa6.08□□□□□ -1.44
PTCH1-222ENST00000551425 SMIM29Q86T20 159 aa6.08□□□□□ -1.44
PTCH1-222ENST00000551425 LAMTOR3Q9UHA4 124 aa6.08□□□□□ -1.44
PTCH1-222ENST00000551425 ATP11AUNQ6ZP68 121 aa6.07□□□□□ -1.44
PTCH1-222ENST00000551425 KRTAP10-10P60014 251 aa6.06□□□□□ -1.44
PTCH1-222ENST00000551425 COL5A1-AS1Q5SY13 56 aa6.06□□□□□ -1.44
PTCH1-222ENST00000551425 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.06□□□□□ -1.44
PTCH1-222ENST00000551425 FAM218AQ96MZ4 157 aa6.06□□□□□ -1.44
PTCH1-222ENST00000551425 TEX49A0A1B0GTD5 131 aa6.05□□□□□ -1.44
PTCH1-222ENST00000551425 C9orf118A6NHY6 69 aa6.05□□□□□ -1.44
PTCH1-222ENST00000551425 TAX1BP3O14907 124 aa6.05□□□□□ -1.44
PTCH1-222ENST00000551425 LYRM7Q5U5X0 104 aa6.05□□□□□ -1.44
PTCH1-222ENST00000551425 DEFB105AQ8NG35 78 aa6.05□□□□□ -1.44
PTCH1-222ENST00000551425 CLEC2BQ92478 149 aa6.05□□□□□ -1.44
PTCH1-222ENST00000551425 IGLV5-48A0A075B6I7 105 aa6.04□□□□□ -1.44
PTCH1-222ENST00000551425 H3BUT2 72 aa6.04□□□□□ -1.44
PTCH1-222ENST00000551425 GHRHP01286 108 aa6.04□□□□□ -1.44
PTCH1-222ENST00000551425 OCIAD2Q56VL3 154 aa6.04□□□□□ -1.44
PTCH1-222ENST00000551425 Q6ZQY7 126 aa6.04□□□□□ -1.44
PTCH1-222ENST00000551425 Q75L30 129 aa6.04□□□□□ -1.44
PTCH1-222ENST00000551425 NAA38Q9BRA0 125 aaKnown RBP6.04□□□□□ -1.44
PTCH1-222ENST00000551425 NEBP20929 6669 aa6.03□□□□□ -1.44
PTCH1-222ENST00000551425 DNAL4O96015 105 aa6.03□□□□□ -1.44
PTCH1-222ENST00000551425 LST1O00453 97 aa6.02□□□□□ -1.45
PTCH1-222ENST00000551425 TRACP01848 142 aa6.02□□□□□ -1.45
PTCH1-222ENST00000551425 PPDPFLQ8WWR9 84 aa6.02□□□□□ -1.45
PTCH1-222ENST00000551425 TRBV20-1A0A075B6N2 111 aa6.01□□□□□ -1.45
PTCH1-222ENST00000551425 H3BQ85 93 aa6.01□□□□□ -1.45
PTCH1-222ENST00000551425 ATXN8Q156A1 80 aa6.01□□□□□ -1.45
PTCH1-222ENST00000551425 A0A1W2PPM0 123 aa6□□□□□ -1.45
PTCH1-222ENST00000551425 TCL1BO95988 128 aa6□□□□□ -1.45
PTCH1-222ENST00000551425 FABP2P12104 132 aa6□□□□□ -1.45
PTCH1-222ENST00000551425 ORMDL1Q9P0S3 153 aa6□□□□□ -1.45
PTCH1-222ENST00000551425 F8WEM9 126 aa5.97□□□□□ -1.45
PTCH1-222ENST00000551425 TMEM256-PLSCR3K7ERE1 68 aa5.97□□□□□ -1.45
PTCH1-222ENST00000551425 A0A0G2JQZ4 141 aa5.96□□□□□ -1.46
PTCH1-222ENST00000551425 KRTAP20-1Q3LI63 56 aa5.96□□□□□ -1.46
PTCH1-222ENST00000551425 OBSCN-AS1Q96MR7 158 aa5.96□□□□□ -1.46
PTCH1-222ENST00000551425 NDUFV3P56181 108 aaKnown RBP5.95□□□□□ -1.46
PTCH1-222ENST00000551425 SPCS1Q9Y6A9 102 aa5.95□□□□□ -1.46
PTCH1-222ENST00000551425 BAALC-AS2P0C853 105 aa5.94□□□□□ -1.46
PTCH1-222ENST00000551425 UBE2V1Q13404 147 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms