RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.82□□□□□ -1.16
NUP188-211ENST00000550219 IGLV5-48A0A075B6I7 105 aa7.81□□□□□ -1.16
NUP188-211ENST00000550219 A0A1W2PPM0 123 aa7.81□□□□□ -1.16
NUP188-211ENST00000550219 SNCGO76070 127 aa7.81□□□□□ -1.16
NUP188-211ENST00000550219 SPRR1BP22528 89 aa7.81□□□□□ -1.16
NUP188-211ENST00000550219 LINC01547P58512 204 aaPredicted RBP7.81□□□□□ -1.16
NUP188-211ENST00000550219 LYRM7Q5U5X0 104 aa7.81□□□□□ -1.16
NUP188-211ENST00000550219 LINC00304Q8N9R0 145 aa7.81□□□□□ -1.16
NUP188-211ENST00000550219 TRACP01848 142 aa7.8□□□□□ -1.16
NUP188-211ENST00000550219 FAM229BQ4G0N7 80 aa7.8□□□□□ -1.16
NUP188-211ENST00000550219 A0A0U1RQV1 116 aa7.79□□□□□ -1.16
NUP188-211ENST00000550219 TCL1BO95988 128 aa7.79□□□□□ -1.16
NUP188-211ENST00000550219 Q6ZQY7 126 aa7.79□□□□□ -1.16
NUP188-211ENST00000550219 TRBV20-1A0A075B6N2 111 aa7.78□□□□□ -1.16
NUP188-211ENST00000550219 LCE2BO14633 110 aa7.78□□□□□ -1.16
NUP188-211ENST00000550219 FABP2P12104 132 aa7.78□□□□□ -1.16
NUP188-211ENST00000550219 ATXN8Q156A1 80 aa7.78□□□□□ -1.16
NUP188-211ENST00000550219 GAGE2AQ6NT46 116 aa7.78□□□□□ -1.16
NUP188-211ENST00000550219 TEX49A0A1B0GTD5 131 aa7.77□□□□□ -1.17
NUP188-211ENST00000550219 OCIAD2Q56VL3 154 aa7.77□□□□□ -1.17
NUP188-211ENST00000550219 Q8N377 158 aa7.77□□□□□ -1.17
NUP188-211ENST00000550219 PPDPFLQ8WWR9 84 aa7.76□□□□□ -1.17
NUP188-211ENST00000550219 SMIM29Q86T20 159 aa7.75□□□□□ -1.17
NUP188-211ENST00000550219 C3orf22Q8N5N4 141 aa7.75□□□□□ -1.17
NUP188-211ENST00000550219 DEFB105AQ8NG35 78 aa7.75□□□□□ -1.17
NUP188-211ENST00000550219 DNAL4O96015 105 aa7.74□□□□□ -1.17
NUP188-211ENST00000550219 H3BQ85 93 aa7.73□□□□□ -1.17
NUP188-211ENST00000550219 GHRHP01286 108 aa7.73□□□□□ -1.17
NUP188-211ENST00000550219 CDIP1Q9H305 208 aa7.73□□□□□ -1.17
NUP188-211ENST00000550219 IGLV7-46A0A075B6I9 117 aa7.72□□□□□ -1.17
NUP188-211ENST00000550219 ORMDL1Q9P0S3 153 aa7.72□□□□□ -1.17
NUP188-211ENST00000550219 SPCS1Q9Y6A9 102 aa7.72□□□□□ -1.17
NUP188-211ENST00000550219 LAMTOR3Q9UHA4 124 aa7.71□□□□□ -1.18
NUP188-211ENST00000550219 TMEM256-PLSCR3K7ERE1 68 aa7.7□□□□□ -1.18
NUP188-211ENST00000550219 TPRXLQ17RH7 258 aa7.7□□□□□ -1.18
NUP188-211ENST00000550219 MUC2Q02817 5179 aa7.7□□□□□ -1.18
NUP188-211ENST00000550219 H3BMG7 143 aa7.69□□□□□ -1.18
NUP188-211ENST00000550219 K7EP34 96 aa7.69□□□□□ -1.18
NUP188-211ENST00000550219 BAALC-AS2P0C853 105 aa7.69□□□□□ -1.18
NUP188-211ENST00000550219 UBE2V1Q13404 147 aa7.68□□□□□ -1.18
NUP188-211ENST00000550219 IGLV8-61A0A075B6I0 122 aa7.67□□□□□ -1.18
NUP188-211ENST00000550219 SSBP3-AS1Q7Z2R9 100 aa7.67□□□□□ -1.18
NUP188-211ENST00000550219 IGLV9-49A0A0B4J1Y8 123 aa7.66□□□□□ -1.18
NUP188-211ENST00000550219 C9JAW5 83 aa7.66□□□□□ -1.18
NUP188-211ENST00000550219 NDUFV3P56181 108 aaKnown RBP7.66□□□□□ -1.18
NUP188-211ENST00000550219 MOBPQ13875 183 aa7.65□□□□□ -1.18
NUP188-211ENST00000550219 C4orf48Q5BLP8 95 aa7.65□□□□□ -1.18
NUP188-211ENST00000550219 GTF2H5Q6ZYL4 71 aa7.65□□□□□ -1.18
NUP188-211ENST00000550219 Q8NBF4 154 aa7.65□□□□□ -1.18
NUP188-211ENST00000550219 H3BT86 120 aa7.64□□□□□ -1.19
NUP188-211ENST00000550219 SPAG11AQ6PDA7 123 aa7.64□□□□□ -1.19
NUP188-211ENST00000550219 PRO0461Q9UI25 63 aa7.64□□□□□ -1.19
NUP188-211ENST00000550219 F8WEM9 126 aa7.63□□□□□ -1.19
NUP188-211ENST00000550219 C9orf153Q5TBE3 101 aa7.63□□□□□ -1.19
NUP188-211ENST00000550219 ANKRD29Q8N6D5 301 aa7.62□□□□□ -1.19
NUP188-211ENST00000550219 MUC17Q685J3 4493 aa7.61□□□□□ -1.19
NUP188-211ENST00000550219 SMCPP49901 116 aaPredicted RBP7.61□□□□□ -1.19
NUP188-211ENST00000550219 Q6JHZ5 121 aa7.61□□□□□ -1.19
NUP188-211ENST00000550219 A0A1B0GV90 55 aa7.6□□□□□ -1.19
NUP188-211ENST00000550219 LCE2AQ5TA79 106 aaPredicted RBP7.6□□□□□ -1.19
NUP188-211ENST00000550219 MTURNQ8N3F0 131 aa7.6□□□□□ -1.19
NUP188-211ENST00000550219 KRTAP9-2Q9BYQ4 174 aa7.6□□□□□ -1.19
NUP188-211ENST00000550219 FP248Q71RG6 208 aaPredicted RBP7.59□□□□□ -1.19
NUP188-211ENST00000550219 IGFL1Q6UW32 110 aa7.58□□□□□ -1.2
NUP188-211ENST00000550219 OBSCN-AS1Q96MR7 158 aa7.58□□□□□ -1.2
NUP188-211ENST00000550219 CD164Q04900 197 aa7.57□□□□□ -1.2
NUP188-211ENST00000550219 A0A0G2JQZ4 141 aa7.56□□□□□ -1.2
NUP188-211ENST00000550219 TRBV7-4A0A0J9YYF1 115 aa7.56□□□□□ -1.2
NUP188-211ENST00000550219 F8W1H4 67 aa7.56□□□□□ -1.2
NUP188-211ENST00000550219 JMJD7-PLA2G4BH0Y9G9 81 aa7.56□□□□□ -1.2
NUP188-211ENST00000550219 RBM3P98179 157 aaKnown RBP7.56□□□□□ -1.2
NUP188-211ENST00000550219 SPINK1P00995 79 aa7.55□□□□□ -1.2
NUP188-211ENST00000550219 KRTAP13-3Q3SY46 172 aa7.55□□□□□ -1.2
NUP188-211ENST00000550219 Q6Q795 121 aa7.54□□□□□ -1.2
NUP188-211ENST00000550219 FAT4Q6V0I7 4981 aa7.54□□□□□ -1.2
NUP188-211ENST00000550219 A0A1B0GV72 72 aa7.53□□□□□ -1.2
NUP188-211ENST00000550219 RPS29P62273 56 aaKnown RBP7.53□□□□□ -1.2
NUP188-211ENST00000550219 LOC110117498A0A087WWA1 95 aa7.52□□□□□ -1.21
NUP188-211ENST00000550219 DSCR8Q96T75 97 aa7.52□□□□□ -1.21
NUP188-211ENST00000550219 A0A1W2PNM2 257 aa7.51□□□□□ -1.21
NUP188-211ENST00000550219 TEN1Q86WV5 123 aa7.51□□□□□ -1.21
NUP188-211ENST00000550219 PDE6GP18545 87 aa7.5□□□□□ -1.21
NUP188-211ENST00000550219 TRBV7-7A0A0K0K1E9 115 aa7.49□□□□□ -1.21
NUP188-211ENST00000550219 ASB16-AS1Q495Z4 193 aa7.49□□□□□ -1.21
NUP188-211ENST00000550219 Q5XG85 94 aa7.49□□□□□ -1.21
NUP188-211ENST00000550219 HRCT1Q6UXD1 115 aa7.49□□□□□ -1.21
NUP188-211ENST00000550219 Q6ZQT0 140 aa7.49□□□□□ -1.21
NUP188-211ENST00000550219 C14orf132Q9NPU4 83 aa7.49□□□□□ -1.21
NUP188-211ENST00000550219 CCKP06307 115 aa7.47□□□□□ -1.21
NUP188-211ENST00000550219 SEC61BP60468 96 aaKnown RBP7.47□□□□□ -1.21
NUP188-211ENST00000550219 C21orf62-AS1Q17RA5 79 aa7.47□□□□□ -1.21
NUP188-211ENST00000550219 ETDBQ3ZM63 59 aa7.46□□□□□ -1.22
NUP188-211ENST00000550219 LIMD2Q9BT23 127 aa7.45□□□□□ -1.22
NUP188-211ENST00000550219 KRTAP4-1Q9BYQ7 146 aa7.45□□□□□ -1.22
NUP188-211ENST00000550219 A0A1B0GW54 56 aa7.44□□□□□ -1.22
NUP188-211ENST00000550219 A0A087WSZ3 146 aa7.42□□□□□ -1.22
NUP188-211ENST00000550219 VPS25Q9BRG1 176 aa7.41□□□□□ -1.22
NUP188-211ENST00000550219 KRTAP9-6A0A140TA67 174 aa7.4□□□□□ -1.22
NUP188-211ENST00000550219 XP32Q5T750 250 aa7.4□□□□□ -1.22
NUP188-211ENST00000550219 SS18L2Q9UHA2 77 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms