RNA–Protein interactions for RNA: ENST00000549678.1

PTCH1-219, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 578 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-219ENST00000549678 UQCR10Q9UDW1 63 aa4.18□□□□□ -1.74
PTCH1-219ENST00000549678 SMIM6P0DI80 62 aa4.17□□□□□ -1.74
PTCH1-219ENST00000549678 PSMB2P49721 201 aa4.17□□□□□ -1.74
PTCH1-219ENST00000549678 IGLV5-48A0A075B6I7 105 aa4.16□□□□□ -1.74
PTCH1-219ENST00000549678 H0YGX0 51 aa4.16□□□□□ -1.74
PTCH1-219ENST00000549678 FXYD2P54710 66 aa4.16□□□□□ -1.74
PTCH1-219ENST00000549678 RPS29P62273 56 aaKnown RBP4.16□□□□□ -1.74
PTCH1-219ENST00000549678 FP248Q71RG6 208 aaPredicted RBP4.16□□□□□ -1.74
PTCH1-219ENST00000549678 PRO1854Q9UHT4 67 aa4.16□□□□□ -1.74
PTCH1-219ENST00000549678 GHRHP01286 108 aa4.15□□□□□ -1.75
PTCH1-219ENST00000549678 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.15□□□□□ -1.75
PTCH1-219ENST00000549678 SNHG12Q9BXW3 62 aa4.15□□□□□ -1.75
PTCH1-219ENST00000549678 DNAL4O96015 105 aa4.14□□□□□ -1.75
PTCH1-219ENST00000549678 COX6CP09669 75 aa4.14□□□□□ -1.75
PTCH1-219ENST00000549678 Q8N377 158 aa4.14□□□□□ -1.75
PTCH1-219ENST00000549678 LINC01547P58512 204 aaPredicted RBP4.13□□□□□ -1.75
PTCH1-219ENST00000549678 TPRXLQ17RH7 258 aa4.13□□□□□ -1.75
PTCH1-219ENST00000549678 OCIAD2Q56VL3 154 aa4.13□□□□□ -1.75
PTCH1-219ENST00000549678 SMIM29Q86T20 159 aa4.13□□□□□ -1.75
PTCH1-219ENST00000549678 PPDPFLQ8WWR9 84 aa4.13□□□□□ -1.75
PTCH1-219ENST00000549678 K7ERJ3 54 aa4.12□□□□□ -1.75
PTCH1-219ENST00000549678 CD164Q04900 197 aa4.12□□□□□ -1.75
PTCH1-219ENST00000549678 Q6JHZ5 121 aa4.12□□□□□ -1.75
PTCH1-219ENST00000549678 A0A0G2JQZ4 141 aa4.11□□□□□ -1.75
PTCH1-219ENST00000549678 TRIAP1O43715 76 aa4.11□□□□□ -1.75
PTCH1-219ENST00000549678 TCL1BO95988 128 aa4.11□□□□□ -1.75
PTCH1-219ENST00000549678 SCGB1C2P0DMR2 95 aa4.11□□□□□ -1.75
PTCH1-219ENST00000549678 FABP2P12104 132 aa4.11□□□□□ -1.75
PTCH1-219ENST00000549678 CLEC2BQ92478 149 aa4.11□□□□□ -1.75
PTCH1-219ENST00000549678 A0A1B0GX51 115 aa4.1□□□□□ -1.75
PTCH1-219ENST00000549678 PCP4L1A6NKN8 68 aa4.1□□□□□ -1.75
PTCH1-219ENST00000549678 TSTD3H0UI37 97 aa4.1□□□□□ -1.75
PTCH1-219ENST00000549678 M0R143 59 aa4.1□□□□□ -1.75
PTCH1-219ENST00000549678 FAM218AQ96MZ4 157 aa4.1□□□□□ -1.75
PTCH1-219ENST00000549678 ORMDL1Q9P0S3 153 aa4.09□□□□□ -1.75
PTCH1-219ENST00000549678 H3BUT2 72 aa4.08□□□□□ -1.76
PTCH1-219ENST00000549678 NDUFV3P56181 108 aaKnown RBP4.08□□□□□ -1.76
PTCH1-219ENST00000549678 IGFL1Q6UW32 110 aa4.08□□□□□ -1.76
PTCH1-219ENST00000549678 A0A1B0GV72 72 aa4.07□□□□□ -1.76
PTCH1-219ENST00000549678 H3BMG7 143 aa4.07□□□□□ -1.76
PTCH1-219ENST00000549678 H3BQ85 93 aa4.07□□□□□ -1.76
PTCH1-219ENST00000549678 KRTAP13-3Q3SY46 172 aa4.07□□□□□ -1.76
PTCH1-219ENST00000549678 IGLV8-61A0A075B6I0 122 aa4.06□□□□□ -1.76
PTCH1-219ENST00000549678 TRBV7-7A0A0K0K1E9 115 aa4.06□□□□□ -1.76
PTCH1-219ENST00000549678 C9orf92A6NGG3 77 aa4.06□□□□□ -1.76
PTCH1-219ENST00000549678 BATFQ16520 125 aa4.06□□□□□ -1.76
PTCH1-219ENST00000549678 SS18L2Q9UHA2 77 aa4.06□□□□□ -1.76
PTCH1-219ENST00000549678 TMEM256-PLSCR3K7ERE1 68 aa4.05□□□□□ -1.76
PTCH1-219ENST00000549678 SEC61BP60468 96 aaKnown RBP4.05□□□□□ -1.76
PTCH1-219ENST00000549678 LST1O00453 97 aa4.04□□□□□ -1.76
PTCH1-219ENST00000549678 LCE2AQ5TA79 106 aaPredicted RBP4.04□□□□□ -1.76
PTCH1-219ENST00000549678 LYRM7Q5U5X0 104 aa4.04□□□□□ -1.76
PTCH1-219ENST00000549678 Q5XG85 94 aa4.04□□□□□ -1.76
PTCH1-219ENST00000549678 TEN1Q86WV5 123 aa4.04□□□□□ -1.76
PTCH1-219ENST00000549678 ANKRD29Q8N6D5 301 aa4.04□□□□□ -1.76
PTCH1-219ENST00000549678 TRACP01848 142 aa4.03□□□□□ -1.76
PTCH1-219ENST00000549678 C1orf195Q5TG92 126 aa4.03□□□□□ -1.76
PTCH1-219ENST00000549678 A0A087WSZ3 146 aa4.02□□□□□ -1.77
PTCH1-219ENST00000549678 ATXN8Q156A1 80 aa4.02□□□□□ -1.77
PTCH1-219ENST00000549678 XP32Q5T750 250 aa4.02□□□□□ -1.77
PTCH1-219ENST00000549678 NAA38Q9BRA0 125 aaKnown RBP4.02□□□□□ -1.77
PTCH1-219ENST00000549678 VPS25Q9BRG1 176 aa4.02□□□□□ -1.77
PTCH1-219ENST00000549678 ASB16-AS1Q495Z4 193 aa4.01□□□□□ -1.77
PTCH1-219ENST00000549678 DSCR8Q96T75 97 aa4.01□□□□□ -1.77
PTCH1-219ENST00000549678 KRTAP9-2Q9BYQ4 174 aa4.01□□□□□ -1.77
PTCH1-219ENST00000549678 UBE2V1Q13404 147 aa4□□□□□ -1.77
PTCH1-219ENST00000549678 SIGMAR1Q99720 223 aa4□□□□□ -1.77
PTCH1-219ENST00000549678 CCKP06307 115 aa3.99□□□□□ -1.77
PTCH1-219ENST00000549678 BAALC-AS2P0C853 105 aa3.99□□□□□ -1.77
PTCH1-219ENST00000549678 RBM3P98179 157 aaKnown RBP3.99□□□□□ -1.77
PTCH1-219ENST00000549678 Q6Q795 121 aa3.99□□□□□ -1.77
PTCH1-219ENST00000549678 TRBV7-4A0A0J9YYF1 115 aa3.97□□□□□ -1.77
PTCH1-219ENST00000549678 A0A1W2PNM2 257 aa3.97□□□□□ -1.77
PTCH1-219ENST00000549678 C9JAW5 83 aa3.97□□□□□ -1.77
PTCH1-219ENST00000549678 TRBV20-1A0A075B6N2 111 aa3.96□□□□□ -1.78
PTCH1-219ENST00000549678 JMJD7-PLA2G4BH0Y9G9 81 aa3.96□□□□□ -1.78
PTCH1-219ENST00000549678 IGKV4-1P06312 121 aa3.96□□□□□ -1.78
PTCH1-219ENST00000549678 PCOTHQ58A44 107 aa3.96□□□□□ -1.78
PTCH1-219ENST00000549678 OBSCN-AS1Q96MR7 158 aa3.96□□□□□ -1.78
PTCH1-219ENST00000549678 RPL37P61927 97 aaKnown RBP3.95□□□□□ -1.78
PTCH1-219ENST00000549678 Q96NJ1 140 aa3.95□□□□□ -1.78
PTCH1-219ENST00000549678 C9orf118A6NHY6 69 aa3.94□□□□□ -1.78
PTCH1-219ENST00000549678 C21orf62-AS1Q17RA5 79 aa3.94□□□□□ -1.78
PTCH1-219ENST00000549678 LCE2DQ5TA82 110 aaPredicted RBP3.94□□□□□ -1.78
PTCH1-219ENST00000549678 DEFB116Q30KQ4 102 aa3.93□□□□□ -1.78
PTCH1-219ENST00000549678 ATP11AUNQ6ZP68 121 aa3.93□□□□□ -1.78
PTCH1-219ENST00000549678 FLGP20930 4061 aaPredicted RBP3.93□□□□□ -1.78
PTCH1-219ENST00000549678 A0A1W2PPM0 123 aa3.92□□□□□ -1.78
PTCH1-219ENST00000549678 TAX1BP3O14907 124 aa3.92□□□□□ -1.78
PTCH1-219ENST00000549678 DSCR10P59022 87 aa3.92□□□□□ -1.78
PTCH1-219ENST00000549678 KRTAP4-1Q9BYQ7 146 aa3.92□□□□□ -1.78
PTCH1-219ENST00000549678 FSIP2Q5CZC0 6907 aa3.91□□□□□ -1.78
PTCH1-219ENST00000549678 IGHV6-1A0A0B4J1U7 121 aa3.91□□□□□ -1.78
PTCH1-219ENST00000549678 PDE6GP18545 87 aa3.91□□□□□ -1.78
PTCH1-219ENST00000549678 LINC00313P59037 77 aa3.91□□□□□ -1.78
PTCH1-219ENST00000549678 MTURNQ8N3F0 131 aa3.91□□□□□ -1.78
PTCH1-219ENST00000549678 C14orf132Q9NPU4 83 aa3.91□□□□□ -1.78
PTCH1-219ENST00000549678 SPCS1Q9Y6A9 102 aa3.91□□□□□ -1.78
PTCH1-219ENST00000549678 H3BT86 120 aa3.9□□□□□ -1.79
PTCH1-219ENST00000549678 COL5A1-AS1Q5SY13 56 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms