RNA–Protein interactions for RNA: ENST00000549396.5

PPFIA2-216, Transcript of PTPRF interacting protein alpha 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA2, Length 5,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-216ENST00000549396 KMT2BQ9UMN6 2715 aaPredicted RBP5.45□□□□□ -1.54
PPFIA2-216ENST00000549396 M0R2T5 61 aa5.43□□□□□ -1.54
PPFIA2-216ENST00000549396 CHD7Q9P2D1 2997 aa5.42□□□□□ -1.54
PPFIA2-216ENST00000549396 KRTAP13-1Q8IUC0 172 aa5.42□□□□□ -1.54
PPFIA2-216ENST00000549396 KRTAP29-1A8MX34 341 aaPredicted RBP5.4□□□□□ -1.55
PPFIA2-216ENST00000549396 SPINT4Q6UDR6 99 aa5.39□□□□□ -1.55
PPFIA2-216ENST00000549396 CFAP46Q8IYW2 2715 aa5.39□□□□□ -1.55
PPFIA2-216ENST00000549396 ATRQ13535 2644 aa5.38□□□□□ -1.55
PPFIA2-216ENST00000549396 CAMK2N1Q7Z7J9 78 aa5.38□□□□□ -1.55
PPFIA2-216ENST00000549396 Q8N9P0 234 aaPredicted RBP5.38□□□□□ -1.55
PPFIA2-216ENST00000549396 PANO1I0J062 215 aa5.37□□□□□ -1.55
PPFIA2-216ENST00000549396 UNC79Q9P2D8 2635 aa5.36□□□□□ -1.55
PPFIA2-216ENST00000549396 MGAM2Q2M2H8 2515 aa5.35□□□□□ -1.55
PPFIA2-216ENST00000549396 MAST4O15021 2626 aa5.34□□□□□ -1.55
PPFIA2-216ENST00000549396 A0A087X002 238 aa5.33□□□□□ -1.56
PPFIA2-216ENST00000549396 LINC01554Q52M75 96 aa5.33□□□□□ -1.56
PPFIA2-216ENST00000549396 R4GN34 69 aa5.32□□□□□ -1.56
PPFIA2-216ENST00000549396 H3BS24 57 aa5.32□□□□□ -1.56
PPFIA2-216ENST00000549396 IGSF10Q6WRI0 2623 aa5.31□□□□□ -1.56
PPFIA2-216ENST00000549396 A0A0D9SG42 100 aa5.31□□□□□ -1.56
PPFIA2-216ENST00000549396 H1FX-AS1Q4G0G2 97 aa5.31□□□□□ -1.56
PPFIA2-216ENST00000549396 RPL37P61927 97 aaKnown RBP5.3□□□□□ -1.56
PPFIA2-216ENST00000549396 KRTAP7-1Q8IUC3 87 aa5.28□□□□□ -1.56
PPFIA2-216ENST00000549396 HTTP42858 3142 aa5.27□□□□□ -1.57
PPFIA2-216ENST00000549396 KRTAP13-2Q52LG2 175 aa5.26□□□□□ -1.57
PPFIA2-216ENST00000549396 BAHCC1Q9P281 2608 aa5.25□□□□□ -1.57
PPFIA2-216ENST00000549396 DNAH12Q6ZR08 3092 aa5.24□□□□□ -1.57
PPFIA2-216ENST00000549396 LUZP6Q538Z0 58 aa5.23□□□□□ -1.57
PPFIA2-216ENST00000549396 PLAC4Q8WY50 150 aa5.23□□□□□ -1.57
PPFIA2-216ENST00000549396 KRTAP11-1Q8IUC1 163 aa5.23□□□□□ -1.57
PPFIA2-216ENST00000549396 A8MUU9 505 aa5.22□□□□□ -1.57
PPFIA2-216ENST00000549396 M0QZ58 72 aa5.22□□□□□ -1.57
PPFIA2-216ENST00000549396 C20orf166-AS1Q96NR2 134 aa5.22□□□□□ -1.57
PPFIA2-216ENST00000549396 Q5VV11 94 aa5.2□□□□□ -1.58
PPFIA2-216ENST00000549396 TEP1Q99973 2627 aaKnown RBP5.19□□□□□ -1.58
PPFIA2-216ENST00000549396 NOTCH2NLQ7Z3S9 236 aa5.19□□□□□ -1.58
PPFIA2-216ENST00000549396 SRCAPQ6ZRS2 3230 aa5.19□□□□□ -1.58
PPFIA2-216ENST00000549396 AKAP13Q12802 2813 aa5.19□□□□□ -1.58
PPFIA2-216ENST00000549396 BPTFQ12830 3046 aa5.18□□□□□ -1.58
PPFIA2-216ENST00000549396 ROMO1P60602 79 aa5.16□□□□□ -1.58
PPFIA2-216ENST00000549396 ADM2Q7Z4H4 148 aa5.15□□□□□ -1.59
PPFIA2-216ENST00000549396 TPRXLQ17RH7 258 aa5.14□□□□□ -1.59
PPFIA2-216ENST00000549396 COL6A5A8TX70 2615 aa5.12□□□□□ -1.59
PPFIA2-216ENST00000549396 NSD1Q96L73 2696 aaPredicted RBP5.12□□□□□ -1.59
PPFIA2-216ENST00000549396 PRRC2CQ9Y520 2896 aaKnown RBP5.12□□□□□ -1.59
PPFIA2-216ENST00000549396 SPATA8Q6RVD6 105 aa5.11□□□□□ -1.59
PPFIA2-216ENST00000549396 KRTAP1-4P0C5Y4 121 aa5.11□□□□□ -1.59
PPFIA2-216ENST00000549396 ITPR2Q14571 2701 aa5.1□□□□□ -1.59
PPFIA2-216ENST00000549396 GOLGB1Q14789 3259 aaKnown RBP5.09□□□□□ -1.59
PPFIA2-216ENST00000549396 SETXQ7Z333 2677 aaKnown RBP5.09□□□□□ -1.59
PPFIA2-216ENST00000549396 CYSTM1Q9H1C7 97 aa5.08□□□□□ -1.6
PPFIA2-216ENST00000549396 STAB1Q9NY15 2570 aa5.06□□□□□ -1.6
PPFIA2-216ENST00000549396 TEX15Q9BXT5 2789 aa5.05□□□□□ -1.6
PPFIA2-216ENST00000549396 A0A1B0GVY2 172 aa5.05□□□□□ -1.6
PPFIA2-216ENST00000549396 A6NN06 94 aa5.04□□□□□ -1.6
PPFIA2-216ENST00000549396 UBR5O95071 2799 aaPredicted RBP5.03□□□□□ -1.6
PPFIA2-216ENST00000549396 XP32Q5T750 250 aa5.02□□□□□ -1.61
PPFIA2-216ENST00000549396 MGAQ8IWI9 3026 aa5.02□□□□□ -1.61
PPFIA2-216ENST00000549396 GCN1Q92616 2671 aaKnown RBP5□□□□□ -1.61
PPFIA2-216ENST00000549396 CHD6Q8TD26 2715 aa4.99□□□□□ -1.61
PPFIA2-216ENST00000549396 C5orf42Q9H799 3197 aa4.98□□□□□ -1.61
PPFIA2-216ENST00000549396 CENPEQ02224 2701 aa4.98□□□□□ -1.61
PPFIA2-216ENST00000549396 CEP350Q5VT06 3117 aa4.97□□□□□ -1.61
PPFIA2-216ENST00000549396 HIVEP1P15822 2718 aa4.96□□□□□ -1.62
PPFIA2-216ENST00000549396 MAP1AP78559 2803 aaPredicted RBP4.96□□□□□ -1.62
PPFIA2-216ENST00000549396 KRTAP10-8P60410 259 aa4.95□□□□□ -1.62
PPFIA2-216ENST00000549396 KRTAP13-3Q3SY46 172 aa4.94□□□□□ -1.62
PPFIA2-216ENST00000549396 NBEAL1Q6ZS30 2694 aa4.93□□□□□ -1.62
PPFIA2-216ENST00000549396 DSPP15924 2871 aaKnown RBP4.93□□□□□ -1.62
PPFIA2-216ENST00000549396 NOTCH1P46531 2555 aa4.92□□□□□ -1.62
PPFIA2-216ENST00000549396 KRTAP16-1A8MUX0 517 aa4.92□□□□□ -1.62
PPFIA2-216ENST00000549396 A0A0A0MQY5 61 aa4.92□□□□□ -1.62
PPFIA2-216ENST00000549396 PP632Q6XCG6 107 aa4.91□□□□□ -1.62
PPFIA2-216ENST00000549396 TNP1P09430 55 aa4.91□□□□□ -1.62
PPFIA2-216ENST00000549396 APCP25054 2843 aa4.89□□□□□ -1.63
PPFIA2-216ENST00000549396 TNRC18O15417 2968 aaPredicted RBP4.88□□□□□ -1.63
PPFIA2-216ENST00000549396 RANBP2P49792 3224 aaKnown RBP4.87□□□□□ -1.63
PPFIA2-216ENST00000549396 PRAC1Q96KF2 57 aa4.86□□□□□ -1.63
PPFIA2-216ENST00000549396 ITPR1Q14643 2758 aa4.86□□□□□ -1.63
PPFIA2-216ENST00000549396 UTP20O75691 2785 aaKnown RBP4.85□□□□□ -1.63
PPFIA2-216ENST00000549396 FLNCQ14315 2725 aa4.84□□□□□ -1.63
PPFIA2-216ENST00000549396 PRO2289Q9P1D8 64 aa4.82□□□□□ -1.64
PPFIA2-216ENST00000549396 KRTAP25-1Q3LHN0 102 aa4.82□□□□□ -1.64
PPFIA2-216ENST00000549396 NIPBLQ6KC79 2804 aaeCLIP4.8□□□□□ -1.64
PPFIA2-216ENST00000549396 UTRNP46939 3433 aa4.79□□□□□ -1.64
PPFIA2-216ENST00000549396 TENM4Q6N022 2769 aa4.77□□□□□ -1.65
PPFIA2-216ENST00000549396 H0YAA0 97 aa4.76□□□□□ -1.65
PPFIA2-216ENST00000549396 A8MU10 97 aa4.75□□□□□ -1.65
PPFIA2-216ENST00000549396 DMBT1Q9UGM3 2413 aaPredicted RBP4.74□□□□□ -1.65
PPFIA2-216ENST00000549396 NBEAL2Q6ZNJ1 2754 aa4.74□□□□□ -1.65
PPFIA2-216ENST00000549396 STAB2Q8WWQ8 2551 aa4.73□□□□□ -1.65
PPFIA2-216ENST00000549396 EYSQ5T1H1 3165 aa4.7□□□□□ -1.66
PPFIA2-216ENST00000549396 KRTAP10-10P60014 251 aa4.69□□□□□ -1.66
PPFIA2-216ENST00000549396 WDFY4Q6ZS81 3184 aa4.67□□□□□ -1.66
PPFIA2-216ENST00000549396 LAMA3Q16787 3333 aa4.67□□□□□ -1.66
PPFIA2-216ENST00000549396 LAMA1P25391 3075 aa4.67□□□□□ -1.66
PPFIA2-216ENST00000549396 LRBAP50851 2863 aa4.66□□□□□ -1.66
PPFIA2-216ENST00000549396 PRUNE2Q8WUY3 3088 aa4.66□□□□□ -1.66
PPFIA2-216ENST00000549396 MKI67P46013 3256 aaKnown RBP4.66□□□□□ -1.66
PPFIA2-216ENST00000549396 HRNRQ86YZ3 2850 aaPredicted RBP4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms