RNA–Protein interactions for RNA: ENST00000548399.1

PRPF40B-207, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-207ENST00000548399 ATXN8Q156A1 80 aa8.03□□□□□ -1.12
PRPF40B-207ENST00000548399 ST20-AS1Q8NBB2 130 aa8.03□□□□□ -1.12
PRPF40B-207ENST00000548399 IGLV9-49A0A0B4J1Y8 123 aa8.02□□□□□ -1.13
PRPF40B-207ENST00000548399 PRR4Q16378 134 aa8.02□□□□□ -1.13
PRPF40B-207ENST00000548399 SPCS1Q9Y6A9 102 aa8.02□□□□□ -1.13
PRPF40B-207ENST00000548399 TRACP01848 142 aa8.01□□□□□ -1.13
PRPF40B-207ENST00000548399 MOBPQ13875 183 aa8.01□□□□□ -1.13
PRPF40B-207ENST00000548399 C4orf48Q5BLP8 95 aa8.01□□□□□ -1.13
PRPF40B-207ENST00000548399 SPAG11AQ6PDA7 123 aa8.01□□□□□ -1.13
PRPF40B-207ENST00000548399 Q8NBF4 154 aa8.01□□□□□ -1.13
PRPF40B-207ENST00000548399 UBR4Q5T4S7 5183 aa8□□□□□ -1.13
PRPF40B-207ENST00000548399 DNAL4O96015 105 aa8□□□□□ -1.13
PRPF40B-207ENST00000548399 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.99□□□□□ -1.13
PRPF40B-207ENST00000548399 K7EP34 96 aa7.98□□□□□ -1.13
PRPF40B-207ENST00000548399 Q6ZQY7 126 aa7.98□□□□□ -1.13
PRPF40B-207ENST00000548399 SSBP3-AS1Q7Z2R9 100 aa7.98□□□□□ -1.13
PRPF40B-207ENST00000548399 SPRR1BP22528 89 aa7.97□□□□□ -1.13
PRPF40B-207ENST00000548399 OCIAD2Q56VL3 154 aa7.97□□□□□ -1.13
PRPF40B-207ENST00000548399 C9orf153Q5TBE3 101 aa7.97□□□□□ -1.13
PRPF40B-207ENST00000548399 GTF2H5Q6ZYL4 71 aa7.97□□□□□ -1.13
PRPF40B-207ENST00000548399 H3BMG7 143 aa7.96□□□□□ -1.14
PRPF40B-207ENST00000548399 GHRHP01286 108 aa7.96□□□□□ -1.14
PRPF40B-207ENST00000548399 A0A1B0GV90 55 aa7.95□□□□□ -1.14
PRPF40B-207ENST00000548399 DEFB105AQ8NG35 78 aa7.95□□□□□ -1.14
PRPF40B-207ENST00000548399 RETNLBQ9BQ08 111 aa7.95□□□□□ -1.14
PRPF40B-207ENST00000548399 ORMDL1Q9P0S3 153 aa7.95□□□□□ -1.14
PRPF40B-207ENST00000548399 LAMTOR3Q9UHA4 124 aa7.95□□□□□ -1.14
PRPF40B-207ENST00000548399 IGLV5-48A0A075B6I7 105 aa7.94□□□□□ -1.14
PRPF40B-207ENST00000548399 TEX49A0A1B0GTD5 131 aa7.94□□□□□ -1.14
PRPF40B-207ENST00000548399 H3BQ85 93 aa7.94□□□□□ -1.14
PRPF40B-207ENST00000548399 SPINK1P00995 79 aa7.94□□□□□ -1.14
PRPF40B-207ENST00000548399 LINC01547P58512 204 aaPredicted RBP7.93□□□□□ -1.14
PRPF40B-207ENST00000548399 PPDPFLQ8WWR9 84 aa7.93□□□□□ -1.14
PRPF40B-207ENST00000548399 C9JAW5 83 aa7.92□□□□□ -1.14
PRPF40B-207ENST00000548399 TMEM256-PLSCR3K7ERE1 68 aa7.91□□□□□ -1.14
PRPF40B-207ENST00000548399 BAALC-AS2P0C853 105 aa7.91□□□□□ -1.14
PRPF40B-207ENST00000548399 Q8N377 158 aa7.91□□□□□ -1.14
PRPF40B-207ENST00000548399 LRP2P98164 4655 aa7.91□□□□□ -1.14
PRPF40B-207ENST00000548399 RPS29P62273 56 aaKnown RBP7.89□□□□□ -1.15
PRPF40B-207ENST00000548399 UBE2V1Q13404 147 aa7.89□□□□□ -1.15
PRPF40B-207ENST00000548399 H3BT86 120 aa7.88□□□□□ -1.15
PRPF40B-207ENST00000548399 IGLV7-46A0A075B6I9 117 aa7.87□□□□□ -1.15
PRPF40B-207ENST00000548399 SMIM29Q86T20 159 aa7.87□□□□□ -1.15
PRPF40B-207ENST00000548399 MTURNQ8N3F0 131 aa7.87□□□□□ -1.15
PRPF40B-207ENST00000548399 F8W1H4 67 aa7.86□□□□□ -1.15
PRPF40B-207ENST00000548399 FP248Q71RG6 208 aaPredicted RBP7.86□□□□□ -1.15
PRPF40B-207ENST00000548399 ANKRD29Q8N6D5 301 aa7.86□□□□□ -1.15
PRPF40B-207ENST00000548399 PRO0461Q9UI25 63 aa7.86□□□□□ -1.15
PRPF40B-207ENST00000548399 NDUFV3P56181 108 aaKnown RBP7.85□□□□□ -1.15
PRPF40B-207ENST00000548399 LPAP08519 4548 aa7.83□□□□□ -1.16
PRPF40B-207ENST00000548399 F8WEM9 126 aa7.83□□□□□ -1.16
PRPF40B-207ENST00000548399 SMCPP49901 116 aaPredicted RBP7.83□□□□□ -1.16
PRPF40B-207ENST00000548399 TPRXLQ17RH7 258 aa7.83□□□□□ -1.16
PRPF40B-207ENST00000548399 HRCT1Q6UXD1 115 aa7.83□□□□□ -1.16
PRPF40B-207ENST00000548399 CD164Q04900 197 aa7.81□□□□□ -1.16
PRPF40B-207ENST00000548399 LIMD2Q9BT23 127 aa7.81□□□□□ -1.16
PRPF40B-207ENST00000548399 CDIP1Q9H305 208 aa7.8□□□□□ -1.16
PRPF40B-207ENST00000548399 IGLV8-61A0A075B6I0 122 aa7.79□□□□□ -1.16
PRPF40B-207ENST00000548399 JMJD7-PLA2G4BH0Y9G9 81 aa7.79□□□□□ -1.16
PRPF40B-207ENST00000548399 RBM3P98179 157 aaKnown RBP7.78□□□□□ -1.16
PRPF40B-207ENST00000548399 OBSCN-AS1Q96MR7 158 aa7.77□□□□□ -1.17
PRPF40B-207ENST00000548399 RNF213Q63HN8 5207 aa7.77□□□□□ -1.17
PRPF40B-207ENST00000548399 A0A0G2JQZ4 141 aa7.76□□□□□ -1.17
PRPF40B-207ENST00000548399 A0A1B0GV72 72 aa7.76□□□□□ -1.17
PRPF40B-207ENST00000548399 Q6JHZ5 121 aa7.76□□□□□ -1.17
PRPF40B-207ENST00000548399 TEN1Q86WV5 123 aa7.75□□□□□ -1.17
PRPF40B-207ENST00000548399 DSCR8Q96T75 97 aa7.75□□□□□ -1.17
PRPF40B-207ENST00000548399 KRTAP13-3Q3SY46 172 aa7.74□□□□□ -1.17
PRPF40B-207ENST00000548399 ETDBQ3ZM63 59 aa7.74□□□□□ -1.17
PRPF40B-207ENST00000548399 IGFL1Q6UW32 110 aa7.73□□□□□ -1.17
PRPF40B-207ENST00000548399 TRBV7-4A0A0J9YYF1 115 aa7.72□□□□□ -1.17
PRPF40B-207ENST00000548399 PDE6GP18545 87 aa7.72□□□□□ -1.17
PRPF40B-207ENST00000548399 Q5XG85 94 aa7.72□□□□□ -1.17
PRPF40B-207ENST00000548399 C14orf132Q9NPU4 83 aa7.72□□□□□ -1.17
PRPF40B-207ENST00000548399 LOC110117498A0A087WWA1 95 aa7.71□□□□□ -1.18
PRPF40B-207ENST00000548399 C21orf62-AS1Q17RA5 79 aa7.69□□□□□ -1.18
PRPF40B-207ENST00000548399 Q6ZQT0 140 aa7.68□□□□□ -1.18
PRPF40B-207ENST00000548399 CCKP06307 115 aa7.67□□□□□ -1.18
PRPF40B-207ENST00000548399 Q6Q795 121 aa7.67□□□□□ -1.18
PRPF40B-207ENST00000548399 TRBV7-7A0A0K0K1E9 115 aa7.66□□□□□ -1.18
PRPF40B-207ENST00000548399 A0A1W2PNM2 257 aa7.66□□□□□ -1.18
PRPF40B-207ENST00000548399 C1orf195Q5TG92 126 aa7.66□□□□□ -1.18
PRPF40B-207ENST00000548399 VPS25Q9BRG1 176 aa7.65□□□□□ -1.18
PRPF40B-207ENST00000548399 A0A1B0GW54 56 aa7.62□□□□□ -1.19
PRPF40B-207ENST00000548399 ASB16-AS1Q495Z4 193 aa7.61□□□□□ -1.19
PRPF40B-207ENST00000548399 C9orf92A6NGG3 77 aa7.6□□□□□ -1.19
PRPF40B-207ENST00000548399 SEC61BP60468 96 aaKnown RBP7.6□□□□□ -1.19
PRPF40B-207ENST00000548399 XP32Q5T750 250 aa7.6□□□□□ -1.19
PRPF40B-207ENST00000548399 A0A087WSZ3 146 aa7.59□□□□□ -1.19
PRPF40B-207ENST00000548399 MUC2Q02817 5179 aa7.59□□□□□ -1.2
PRPF40B-207ENST00000548399 SS18L2Q9UHA2 77 aa7.58□□□□□ -1.2
PRPF40B-207ENST00000548399 J3QR89 54 aa7.57□□□□□ -1.2
PRPF40B-207ENST00000548399 A0A0U1RQV1 116 aa7.56□□□□□ -1.2
PRPF40B-207ENST00000548399 FAM240AA0A1B0GVK7 77 aa7.54□□□□□ -1.2
PRPF40B-207ENST00000548399 ACYP1P07311 99 aa7.54□□□□□ -1.2
PRPF40B-207ENST00000548399 MUC17Q685J3 4493 aa7.54□□□□□ -1.2
PRPF40B-207ENST00000548399 NREPQ16612 68 aa7.51□□□□□ -1.21
PRPF40B-207ENST00000548399 LINC00846Q9NV44 126 aa7.51□□□□□ -1.21
PRPF40B-207ENST00000548399 K7ERU9 68 aa7.5□□□□□ -1.21
PRPF40B-207ENST00000548399 UBL5Q9BZL1 73 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms