RNA–Protein interactions for RNA: ENST00000544639.1

RAP1B-231, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-231	ENST00000544639	IQCF6	A8MYZ5	107 aa		-1.12	□□□□□ -2.59
RAP1B-231	ENST00000544639	CORT	O00230	105 aa		-1.12	□□□□□ -2.59
RAP1B-231	ENST00000544639	DLEU1	O43261	78 aa		-1.12	□□□□□ -2.59
RAP1B-231	ENST00000544639	MPC2	O95563	127 aa		-1.12	□□□□□ -2.59
RAP1B-231	ENST00000544639	MT1G	P13640	62 aa		-1.12	□□□□□ -2.59
RAP1B-231	ENST00000544639	HMGN3	Q15651	99 aa		-1.12	□□□□□ -2.59
RAP1B-231	ENST00000544639	KRTAP20-1	Q3LI63	56 aa		-1.12	□□□□□ -2.59
RAP1B-231	ENST00000544639	ZNF720	Q7Z2F6	126 aa		-1.12	□□□□□ -2.59
RAP1B-231	ENST00000544639	MAGI3	Q5TCQ9	1506 aa		-1.12	□□□□□ -2.59
RAP1B-231	ENST00000544639	NRXN1	Q9ULB1	1477 aa		-1.12	□□□□□ -2.59
RAP1B-231	ENST00000544639	KIF20B	Q96Q89	1820 aa		-1.12	□□□□□ -2.59
RAP1B-231	ENST00000544639	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	-1.13	□□□□□ -2.59
RAP1B-231	ENST00000544639		A0A1B0GUT8	65 aa		-1.13	□□□□□ -2.59
RAP1B-231	ENST00000544639		F8WEM9	126 aa		-1.13	□□□□□ -2.59
RAP1B-231	ENST00000544639	IFI6	P09912	130 aa		-1.13	□□□□□ -2.59
RAP1B-231	ENST00000544639	IAPP	P10997	89 aa		-1.13	□□□□□ -2.59
RAP1B-231	ENST00000544639	GNG4	P50150	75 aa		-1.13	□□□□□ -2.59
RAP1B-231	ENST00000544639	TIAM2	Q8IVF5	1701 aa		-1.13	□□□□□ -2.59
RAP1B-231	ENST00000544639	TLN1	Q9Y490	2541 aa	Known RBP	-1.13	□□□□□ -2.59
RAP1B-231	ENST00000544639	NRK	Q7Z2Y5	1582 aa		-1.13	□□□□□ -2.59
RAP1B-231	ENST00000544639	UBR3	Q6ZT12	1888 aa		-1.14	□□□□□ -2.59
RAP1B-231	ENST00000544639	CHD1	O14646	1710 aa		-1.14	□□□□□ -2.59
RAP1B-231	ENST00000544639	LYNX1	G3V0Z9	82 aa		-1.14	□□□□□ -2.59
RAP1B-231	ENST00000544639	TNP1	P09430	55 aa		-1.14	□□□□□ -2.59
RAP1B-231	ENST00000544639	S100A1	P23297	94 aa		-1.14	□□□□□ -2.59
RAP1B-231	ENST00000544639	ANKRD36B	Q8N2N9	1353 aa		-1.14	□□□□□ -2.59
RAP1B-231	ENST00000544639	SPHKAP	Q2M3C7	1700 aa		-1.15	□□□□□ -2.59
RAP1B-231	ENST00000544639	NALCN	Q8IZF0	1738 aa		-1.15	□□□□□ -2.59
RAP1B-231	ENST00000544639	CDC42BPG	Q6DT37	1551 aa		-1.15	□□□□□ -2.59
RAP1B-231	ENST00000544639	PZP	P20742	1482 aa		-1.15	□□□□□ -2.59
RAP1B-231	ENST00000544639	WFDC9	Q8NEX5	89 aa		-1.15	□□□□□ -2.59
RAP1B-231	ENST00000544639	PMCHL2	Q9BQD1	86 aa		-1.15	□□□□□ -2.59
RAP1B-231	ENST00000544639	NES	P48681	1621 aa		-1.15	□□□□□ -2.59
RAP1B-231	ENST00000544639	TEX14	Q8IWB6	1497 aa		-1.16	□□□□□ -2.59
RAP1B-231	ENST00000544639	UQCRHL	A0A096LP55	91 aa		-1.16	□□□□□ -2.6
RAP1B-231	ENST00000544639	MMP24-AS1	A0A0U1RRL7	71 aa		-1.16	□□□□□ -2.6
RAP1B-231	ENST00000544639	TMEM203	Q969S6	136 aa		-1.16	□□□□□ -2.6
RAP1B-231	ENST00000544639	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	-1.16	□□□□□ -2.6
RAP1B-231	ENST00000544639	ITPR2	Q14571	2701 aa		-1.16	□□□□□ -2.6
RAP1B-231	ENST00000544639	PKD1L3	Q7Z443	1732 aa		-1.16	□□□□□ -2.6
RAP1B-231	ENST00000544639	PRDM15	P57071	1507 aa	Predicted RBP	-1.16	□□□□□ -2.6
RAP1B-231	ENST00000544639	MGA	Q8IWI9	3026 aa		-1.16	□□□□□ -2.6
RAP1B-231	ENST00000544639	RGPD3	A6NKT7	1758 aa	Predicted RBP	-1.16	□□□□□ -2.6
RAP1B-231	ENST00000544639	RGPD4	Q7Z3J3	1758 aa		-1.16	□□□□□ -2.6
RAP1B-231	ENST00000544639	ATP7B	P35670	1465 aa		-1.17	□□□□□ -2.6
RAP1B-231	ENST00000544639	FYCO1	Q9BQS8	1478 aa		-1.17	□□□□□ -2.6
RAP1B-231	ENST00000544639	CRYBG1	Q9Y4K1	1723 aa		-1.17	□□□□□ -2.6
RAP1B-231	ENST00000544639	TRAV21	A0A0B4J279	112 aa		-1.17	□□□□□ -2.6
RAP1B-231	ENST00000544639	LCE6A	A0A183	80 aa		-1.17	□□□□□ -2.6
RAP1B-231	ENST00000544639	ATOX1	O00244	68 aa		-1.17	□□□□□ -2.6
RAP1B-231	ENST00000544639	CYB5A	P00167	134 aa		-1.17	□□□□□ -2.6
RAP1B-231	ENST00000544639	PLGLA	Q15195	96 aa		-1.17	□□□□□ -2.6
RAP1B-231	ENST00000544639	COL5A1-AS1	Q5SY13	56 aa		-1.17	□□□□□ -2.6
RAP1B-231	ENST00000544639	GTF2H5	Q6ZYL4	71 aa		-1.17	□□□□□ -2.6
RAP1B-231	ENST00000544639	NWD1	Q149M9	1564 aa		-1.17	□□□□□ -2.6
RAP1B-231	ENST00000544639	DMXL2	Q8TDJ6	3036 aa		-1.18	□□□□□ -2.6
RAP1B-231	ENST00000544639	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	-1.18	□□□□□ -2.6
RAP1B-231	ENST00000544639	CSMD2	Q7Z408	3487 aa		-1.19	□□□□□ -2.6
RAP1B-231	ENST00000544639	PLIN4	Q96Q06	1357 aa		-1.19	□□□□□ -2.6
RAP1B-231	ENST00000544639	ZNF831	Q5JPB2	1677 aa		-1.19	□□□□□ -2.6
RAP1B-231	ENST00000544639	MT-ATP8	P03928	68 aa		-1.19	□□□□□ -2.6
RAP1B-231	ENST00000544639	ACYP1	P07311	99 aa		-1.19	□□□□□ -2.6
RAP1B-231	ENST00000544639	RGPD1	P0DJD0	1748 aa		-1.19	□□□□□ -2.6
RAP1B-231	ENST00000544639	FAU	P35544	74 aa	Known RBP	-1.19	□□□□□ -2.6
RAP1B-231	ENST00000544639	GNG8	Q9UK08	70 aa		-1.19	□□□□□ -2.6
RAP1B-231	ENST00000544639	ADGRG4	Q8IZF6	3080 aa		-1.19	□□□□□ -2.6
RAP1B-231	ENST00000544639	THOC2	Q8NI27	1593 aa	Known RBP	-1.2	□□□□□ -2.6
RAP1B-231	ENST00000544639	IGLV5-48	A0A075B6I7	105 aa		-1.2	□□□□□ -2.6
RAP1B-231	ENST00000544639	POLR1A	O95602	1720 aa	Predicted RBP	-1.2	□□□□□ -2.6
RAP1B-231	ENST00000544639	ABCA3	Q99758	1704 aa		-1.2	□□□□□ -2.6
RAP1B-231	ENST00000544639	TOGARAM1	Q9Y4F4	1720 aa		-1.2	□□□□□ -2.6
RAP1B-231	ENST00000544639	EFCAB10	A6NFE3	127 aa		-1.21	□□□□□ -2.6
RAP1B-231	ENST00000544639	LINC00587	B1AMM8	73 aa		-1.21	□□□□□ -2.6
RAP1B-231	ENST00000544639	HMGN2	P05204	90 aa	Known RBP	-1.21	□□□□□ -2.6
RAP1B-231	ENST00000544639	C2orf88	Q9BSF0	95 aa		-1.21	□□□□□ -2.6
RAP1B-231	ENST00000544639	SUPT6H	Q7KZ85	1726 aa	Known RBP	-1.21	□□□□□ -2.6
RAP1B-231	ENST00000544639	EPRS	P07814	1512 aa	Known RBP	-1.21	□□□□□ -2.6
RAP1B-231	ENST00000544639	ANKRD36C	Q5JPF3	1778 aa		-1.21	□□□□□ -2.6
RAP1B-231	ENST00000544639	ATM	Q13315	3056 aa		-1.21	□□□□□ -2.6
RAP1B-231	ENST00000544639	MRPS10	P82664	201 aa	Known RBP	-1.22	□□□□□ -2.6
RAP1B-231	ENST00000544639	WT1-AS	Q06250	92 aa		-1.22	□□□□□ -2.6
RAP1B-231	ENST00000544639	EIF4G3	O43432	1585 aa	Known RBP	-1.22	□□□□□ -2.61
RAP1B-231	ENST00000544639	FANCA	O15360	1455 aa		-1.23	□□□□□ -2.61
RAP1B-231	ENST00000544639	NDUFB1	O75438	58 aa		-1.23	□□□□□ -2.61
RAP1B-231	ENST00000544639	IFI27	P40305	119 aa	Predicted RBP	-1.23	□□□□□ -2.61
RAP1B-231	ENST00000544639	S100A10	P60903	97 aa		-1.23	□□□□□ -2.61
RAP1B-231	ENST00000544639	SARNP	P82979	210 aa	Known RBP	-1.23	□□□□□ -2.61
RAP1B-231	ENST00000544639	PEA15	Q15121	130 aa		-1.23	□□□□□ -2.61
RAP1B-231	ENST00000544639	CLTC	Q00610	1675 aa	Known RBP	-1.23	□□□□□ -2.61
RAP1B-231	ENST00000544639	ITSN2	Q9NZM3	1697 aa		-1.23	□□□□□ -2.61
RAP1B-231	ENST00000544639	CCNB3	Q8WWL7	1395 aa		-1.23	□□□□□ -2.61
RAP1B-231	ENST00000544639	PARP4	Q9UKK3	1724 aa	Known RBP	-1.23	□□□□□ -2.61
RAP1B-231	ENST00000544639	DIP2B	Q9P265	1576 aa		-1.24	□□□□□ -2.61
RAP1B-231	ENST00000544639	MAST1	Q9Y2H9	1570 aa		-1.24	□□□□□ -2.61
RAP1B-231	ENST00000544639	SMIM11A	P58511	58 aa		-1.24	□□□□□ -2.61
RAP1B-231	ENST00000544639	DOT1L	Q8TEK3	1739 aa		-1.24	□□□□□ -2.61
RAP1B-231	ENST00000544639	CCDC88B	A6NC98	1476 aa		-1.24	□□□□□ -2.61
RAP1B-231	ENST00000544639	NCOA2	Q15596	1464 aa		-1.24	□□□□□ -2.61
RAP1B-231	ENST00000544639	NEXMIF	Q5QGS0	1516 aa		-1.25	□□□□□ -2.61
RAP1B-231	ENST00000544639	FREM2	Q5SZK8	3169 aa		-1.25	□□□□□ -2.61

Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms