RNA–Protein interactions for RNA: ENST00000543637.1

NUP43-206, Transcript of nucleoporin 43, humanhuman

TSL 5

Gene NUP43, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-206ENST00000543637 SNCGO76070 127 aa3.96□□□□□ -1.78
NUP43-206ENST00000543637 TCL1BO95988 128 aa3.96□□□□□ -1.78
NUP43-206ENST00000543637 GHRHP01286 108 aa3.96□□□□□ -1.78
NUP43-206ENST00000543637 S100A1P23297 94 aa3.96□□□□□ -1.78
NUP43-206ENST00000543637 SMIM11BQ8TCY0 68 aa3.96□□□□□ -1.78
NUP43-206ENST00000543637 IGLV5-48A0A075B6I7 105 aa3.94□□□□□ -1.78
NUP43-206ENST00000543637 hADV29S1A0JD25 119 aa3.94□□□□□ -1.78
NUP43-206ENST00000543637 SCGB1D1O95968 90 aa3.94□□□□□ -1.78
NUP43-206ENST00000543637 SMIM29Q86T20 159 aa3.94□□□□□ -1.78
NUP43-206ENST00000543637 HIST3H2BBQ8N257 126 aa3.94□□□□□ -1.78
NUP43-206ENST00000543637 HIST1H4GQ99525 98 aa3.94□□□□□ -1.78
NUP43-206ENST00000543637 BVES-AS1Q5T3Y7 98 aa3.93□□□□□ -1.78
NUP43-206ENST00000543637 Q5XG85 94 aa3.93□□□□□ -1.78
NUP43-206ENST00000543637 LINC00575Q6W349 94 aa3.93□□□□□ -1.78
NUP43-206ENST00000543637 HIST1H2BLQ99880 126 aa3.93□□□□□ -1.78
NUP43-206ENST00000543637 KRTAP4-9Q9BYQ8 210 aa3.93□□□□□ -1.78
NUP43-206ENST00000543637 IGLV8-61A0A075B6I0 122 aa3.92□□□□□ -1.78
NUP43-206ENST00000543637 Q6JHZ5 121 aa3.92□□□□□ -1.78
NUP43-206ENST00000543637 SNHG12Q9BXW3 62 aa3.92□□□□□ -1.78
NUP43-206ENST00000543637 PCOTHQ58A44 107 aa3.91□□□□□ -1.78
NUP43-206ENST00000543637 C1orf195Q5TG92 126 aa3.91□□□□□ -1.78
NUP43-206ENST00000543637 Q6ZQY7 126 aa3.91□□□□□ -1.78
NUP43-206ENST00000543637 A0A0G2JQZ4 141 aa3.9□□□□□ -1.79
NUP43-206ENST00000543637 OCIAD2Q56VL3 154 aa3.9□□□□□ -1.79
NUP43-206ENST00000543637 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.9□□□□□ -1.79
NUP43-206ENST00000543637 PPDPFLQ8WWR9 84 aa3.9□□□□□ -1.79
NUP43-206ENST00000543637 RAB37Q96AX2 223 aa3.9□□□□□ -1.79
NUP43-206ENST00000543637 C12orf57Q99622 126 aa3.9□□□□□ -1.79
NUP43-206ENST00000543637 KRTAP4-1Q9BYQ7 146 aa3.9□□□□□ -1.79
NUP43-206ENST00000543637 MUC2Q02817 5179 aa3.88□□□□□ -1.79
NUP43-206ENST00000543637 H0YGX0 51 aa3.88□□□□□ -1.79
NUP43-206ENST00000543637 COX8AP10176 69 aa3.88□□□□□ -1.79
NUP43-206ENST00000543637 CLEC2BQ92478 149 aa3.88□□□□□ -1.79
NUP43-206ENST00000543637 KRTAP4-2Q9BYR5 136 aa3.88□□□□□ -1.79
NUP43-206ENST00000543637 TRBV7-7A0A0K0K1E9 115 aa3.87□□□□□ -1.79
NUP43-206ENST00000543637 DLEU1O43261 78 aa3.87□□□□□ -1.79
NUP43-206ENST00000543637 IGFL1Q6UW32 110 aa3.87□□□□□ -1.79
NUP43-206ENST00000543637 MUC17Q685J3 4493 aa3.87□□□□□ -1.79
NUP43-206ENST00000543637 LST1O00453 97 aa3.86□□□□□ -1.79
NUP43-206ENST00000543637 RPL37P61927 97 aaKnown RBP3.86□□□□□ -1.79
NUP43-206ENST00000543637 SPATA45Q537H7 98 aa3.86□□□□□ -1.79
NUP43-206ENST00000543637 LCE4AQ5TA78 99 aa3.86□□□□□ -1.79
NUP43-206ENST00000543637 C14orf144Q96I85 54 aa3.86□□□□□ -1.79
NUP43-206ENST00000543637 SS18L2Q9UHA2 77 aa3.86□□□□□ -1.79
NUP43-206ENST00000543637 TMEM238LA0A1B0GVL6 79 aa3.85□□□□□ -1.79
NUP43-206ENST00000543637 CFC1BP0CG36 223 aa3.85□□□□□ -1.79
NUP43-206ENST00000543637 CFC1P0CG37 223 aa3.85□□□□□ -1.79
NUP43-206ENST00000543637 COX6B2Q6YFQ2 88 aa3.85□□□□□ -1.79
NUP43-206ENST00000543637 ATP11AUNQ6ZP68 121 aa3.85□□□□□ -1.79
NUP43-206ENST00000543637 VAMP8Q9BV40 100 aa3.85□□□□□ -1.79
NUP43-206ENST00000543637 HIGD1BQ9P298 99 aa3.85□□□□□ -1.79
NUP43-206ENST00000543637 PAM16Q9Y3D7 125 aa3.85□□□□□ -1.79
NUP43-206ENST00000543637 NDUFV3P56181 108 aaKnown RBP3.84□□□□□ -1.79
NUP43-206ENST00000543637 TEN1Q86WV5 123 aa3.84□□□□□ -1.79
NUP43-206ENST00000543637 A0A0B4J2C4 111 aa3.83□□□□□ -1.8
NUP43-206ENST00000543637 CEND1Q8N111 149 aa3.83□□□□□ -1.8
NUP43-206ENST00000543637 PRO1854Q9UHT4 67 aa3.83□□□□□ -1.8
NUP43-206ENST00000543637 A0A1B0GX51 115 aa3.82□□□□□ -1.8
NUP43-206ENST00000543637 H3BUT2 72 aa3.82□□□□□ -1.8
NUP43-206ENST00000543637 M0R2T5 61 aa3.82□□□□□ -1.8
NUP43-206ENST00000543637 FABP2P12104 132 aa3.82□□□□□ -1.8
NUP43-206ENST00000543637 FAT4Q6V0I7 4981 aa3.82□□□□□ -1.8
NUP43-206ENST00000543637 H3BMG7 143 aa3.81□□□□□ -1.8
NUP43-206ENST00000543637 H3BQ85 93 aa3.81□□□□□ -1.8
NUP43-206ENST00000543637 COX6CP09669 75 aa3.81□□□□□ -1.8
NUP43-206ENST00000543637 Q6Q795 121 aa3.81□□□□□ -1.8
NUP43-206ENST00000543637 OBSCN-AS1Q96MR7 158 aa3.81□□□□□ -1.8
NUP43-206ENST00000543637 Q96NJ1 140 aa3.81□□□□□ -1.8
NUP43-206ENST00000543637 DNAL4O96015 105 aa3.8□□□□□ -1.8
NUP43-206ENST00000543637 PSMB2P49721 201 aa3.8□□□□□ -1.8
NUP43-206ENST00000543637 MT1HP80294 61 aa3.79□□□□□ -1.8
NUP43-206ENST00000543637 Q75L30 129 aa3.79□□□□□ -1.8
NUP43-206ENST00000543637 ANKRD29Q8N6D5 301 aa3.79□□□□□ -1.8
NUP43-206ENST00000543637 A0A087WSZ3 146 aa3.78□□□□□ -1.8
NUP43-206ENST00000543637 C2orf91Q6ZV80 131 aa3.78□□□□□ -1.8
NUP43-206ENST00000543637 FAM218AQ96MZ4 157 aa3.78□□□□□ -1.8
NUP43-206ENST00000543637 KRTAP4-11Q9BYQ6 195 aa3.78□□□□□ -1.8
NUP43-206ENST00000543637 ORMDL1Q9P0S3 153 aa3.78□□□□□ -1.8
NUP43-206ENST00000543637 TRBV20-1A0A075B6N2 111 aa3.77□□□□□ -1.81
NUP43-206ENST00000543637 TMEM256-PLSCR3K7ERE1 68 aa3.77□□□□□ -1.81
NUP43-206ENST00000543637 KRTAP19-2Q3LHN2 52 aa3.77□□□□□ -1.81
NUP43-206ENST00000543637 KRTAP9-7A8MTY7 169 aa3.76□□□□□ -1.81
NUP43-206ENST00000543637 TRIAP1O43715 76 aa3.76□□□□□ -1.81
NUP43-206ENST00000543637 FXYD2P54710 66 aa3.76□□□□□ -1.81
NUP43-206ENST00000543637 SCGB1C2P0DMR2 95 aa3.75□□□□□ -1.81
NUP43-206ENST00000543637 LINC00313P59037 77 aa3.75□□□□□ -1.81
NUP43-206ENST00000543637 HSD52Q0P140 79 aa3.75□□□□□ -1.81
NUP43-206ENST00000543637 SIGMAR1Q99720 223 aa3.75□□□□□ -1.81
NUP43-206ENST00000543637 TRBV7-4A0A0J9YYF1 115 aa3.74□□□□□ -1.81
NUP43-206ENST00000543637 IGKV4-1P06312 121 aa3.74□□□□□ -1.81
NUP43-206ENST00000543637 A0A1W2PNM2 257 aa3.73□□□□□ -1.81
NUP43-206ENST00000543637 A8MUU9 505 aa3.73□□□□□ -1.81
NUP43-206ENST00000543637 TRACP01848 142 aa3.73□□□□□ -1.81
NUP43-206ENST00000543637 DSCR10P59022 87 aa3.73□□□□□ -1.81
NUP43-206ENST00000543637 KRTAP10-6P60371 365 aaPredicted RBP3.73□□□□□ -1.81
NUP43-206ENST00000543637 C20orf166-AS1Q96NR2 134 aa3.73□□□□□ -1.81
NUP43-206ENST00000543637 A0A1B0GV72 72 aa3.72□□□□□ -1.81
NUP43-206ENST00000543637 CCKP06307 115 aa3.72□□□□□ -1.81
NUP43-206ENST00000543637 PYY3Q5JQD4 70 aa3.72□□□□□ -1.81
NUP43-206ENST00000543637 DSCR8Q96T75 97 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms