RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 OXTP01178 125 aa12.44□□□□□ -0.42
SUDS3-204ENST00000543473 FAM229BQ4G0N7 80 aa12.43□□□□□ -0.42
SUDS3-204ENST00000543473 UBR5O95071 2799 aaPredicted RBP12.42□□□□□ -0.42
SUDS3-204ENST00000543473 NBEAQ8NFP9 2946 aa12.42□□□□□ -0.42
SUDS3-204ENST00000543473 REV3LO60673 3130 aa12.42□□□□□ -0.42
SUDS3-204ENST00000543473 SPRR4Q96PI1 79 aa12.42□□□□□ -0.42
SUDS3-204ENST00000543473 CASC10Q5T4H9 136 aa12.41□□□□□ -0.42
SUDS3-204ENST00000543473 BAHCC1Q9P281 2608 aa12.41□□□□□ -0.42
SUDS3-204ENST00000543473 CDC42SE1Q9NRR8 79 aa12.4□□□□□ -0.42
SUDS3-204ENST00000543473 LCA10Q71F78 164 aa12.4□□□□□ -0.42
SUDS3-204ENST00000543473 SPTBN5Q9NRC6 3674 aaKnown RBP12.4□□□□□ -0.42
SUDS3-204ENST00000543473 MIR22HGQ0VDD5 57 aa12.4□□□□□ -0.42
SUDS3-204ENST00000543473 SPEGQ15772 3267 aa12.38□□□□□ -0.43
SUDS3-204ENST00000543473 IGLV5-37A0A075B6J1 123 aa12.36□□□□□ -0.43
SUDS3-204ENST00000543473 TACC2O95359 2948 aa12.35□□□□□ -0.43
SUDS3-204ENST00000543473 C9orf163Q8N9P6 203 aa12.33□□□□□ -0.44
SUDS3-204ENST00000543473 Q96NJ1 140 aa12.33□□□□□ -0.44
SUDS3-204ENST00000543473 DMXL1Q9Y485 3027 aa12.3□□□□□ -0.44
SUDS3-204ENST00000543473 ITPR1Q14643 2758 aa12.3□□□□□ -0.44
SUDS3-204ENST00000543473 ZNF861PO60384 105 aa12.29□□□□□ -0.44
SUDS3-204ENST00000543473 TYMSOSQ8TAI1 123 aa12.29□□□□□ -0.44
SUDS3-204ENST00000543473 ZZEF1O43149 2961 aa12.28□□□□□ -0.44
SUDS3-204ENST00000543473 PRR26Q8N8Z3 221 aa12.28□□□□□ -0.44
SUDS3-204ENST00000543473 ANAPC11Q9NYG5 84 aa12.28□□□□□ -0.44
SUDS3-204ENST00000543473 KALRNO60229 2985 aa12.27□□□□□ -0.44
SUDS3-204ENST00000543473 SSBP3-AS1Q7Z2R9 100 aa12.26□□□□□ -0.45
SUDS3-204ENST00000543473 IGLV7-46A0A075B6I9 117 aa12.25□□□□□ -0.45
SUDS3-204ENST00000543473 Q8N9P0 234 aaPredicted RBP12.25□□□□□ -0.45
SUDS3-204ENST00000543473 CNBPP62633 177 aaKnown RBP12.25□□□□□ -0.45
SUDS3-204ENST00000543473 LRBAP50851 2863 aa12.23□□□□□ -0.45
SUDS3-204ENST00000543473 NBEAL2Q6ZNJ1 2754 aa12.22□□□□□ -0.45
SUDS3-204ENST00000543473 Q75L30 129 aa12.21□□□□□ -0.45
SUDS3-204ENST00000543473 ITPR2Q14571 2701 aa12.21□□□□□ -0.46
SUDS3-204ENST00000543473 APLNQ9ULZ1 77 aa12.2□□□□□ -0.46
SUDS3-204ENST00000543473 RBM12B-AS1Q9P1G2 102 aa12.19□□□□□ -0.46
SUDS3-204ENST00000543473 SPINT4Q6UDR6 99 aa12.19□□□□□ -0.46
SUDS3-204ENST00000543473 PSORS1C2Q9UIG4 136 aa12.16□□□□□ -0.46
SUDS3-204ENST00000543473 A0A087WTM6 91 aa12.15□□□□□ -0.46
SUDS3-204ENST00000543473 SPRR1AP35321 89 aa12.15□□□□□ -0.46
SUDS3-204ENST00000543473 PLA2G1BP04054 148 aaKnown RBP12.14□□□□□ -0.47
SUDS3-204ENST00000543473 Q5VV11 94 aa12.14□□□□□ -0.47
SUDS3-204ENST00000543473 NBEAL1Q6ZS30 2694 aa12.14□□□□□ -0.47
SUDS3-204ENST00000543473 UTP20O75691 2785 aaKnown RBP12.12□□□□□ -0.47
SUDS3-204ENST00000543473 LINC01558Q9Y6Z2 57 aa12.11□□□□□ -0.47
SUDS3-204ENST00000543473 MMP24-AS1A0A0U1RRL7 71 aa12.09□□□□□ -0.47
SUDS3-204ENST00000543473 CFAP47Q6ZTR5 3102 aa12.08□□□□□ -0.48
SUDS3-204ENST00000543473 LOC400499M0QZD8 3231 aa12.06□□□□□ -0.48
SUDS3-204ENST00000543473 IGLV7-43P04211 117 aa12.06□□□□□ -0.48
SUDS3-204ENST00000543473 NSD1Q96L73 2696 aaPredicted RBP12.06□□□□□ -0.48
SUDS3-204ENST00000543473 USP34Q70CQ2 3546 aa12.04□□□□□ -0.48
SUDS3-204ENST00000543473 Q8N1X5 172 aa12□□□□□ -0.49
SUDS3-204ENST00000543473 LINC00472Q9H8W2 130 aa12□□□□□ -0.49
SUDS3-204ENST00000543473 HRES1P13985 223 aa11.99□□□□□ -0.49
SUDS3-204ENST00000543473 HIVEP1P15822 2718 aa11.99□□□□□ -0.49
SUDS3-204ENST00000543473 APCP25054 2843 aa11.98□□□□□ -0.49
SUDS3-204ENST00000543473 ZANQ9Y493 2812 aa11.96□□□□□ -0.49
SUDS3-204ENST00000543473 TNP2Q05952 138 aa11.95□□□□□ -0.5
SUDS3-204ENST00000543473 MYO15AQ9UKN7 3530 aa11.95□□□□□ -0.5
SUDS3-204ENST00000543473 KRTAP26-1Q6PEX3 210 aa11.95□□□□□ -0.5
SUDS3-204ENST00000543473 LINC00304Q8N9R0 145 aa11.94□□□□□ -0.5
SUDS3-204ENST00000543473 PRAC1Q96KF2 57 aa11.94□□□□□ -0.5
SUDS3-204ENST00000543473 SPINK7P58062 85 aa11.93□□□□□ -0.5
SUDS3-204ENST00000543473 CRIPTQ9P021 101 aa11.93□□□□□ -0.5
SUDS3-204ENST00000543473 LINC01554Q52M75 96 aa11.93□□□□□ -0.5
SUDS3-204ENST00000543473 SPRR1BP22528 89 aa11.92□□□□□ -0.5
SUDS3-204ENST00000543473 C9orf92A6NGG3 77 aa11.91□□□□□ -0.5
SUDS3-204ENST00000543473 SMR3BP02814 79 aaPredicted RBP11.91□□□□□ -0.5
SUDS3-204ENST00000543473 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.89□□□□□ -0.51
SUDS3-204ENST00000543473 ZCCHC13Q8WW36 166 aaKnown RBP11.85□□□□□ -0.51
SUDS3-204ENST00000543473 KRTAP4-16G5E9R7 235 aaPredicted RBP11.81□□□□□ -0.52
SUDS3-204ENST00000543473 ASH1LQ9NR48 2969 aaKnown RBP11.8□□□□□ -0.52
SUDS3-204ENST00000543473 KRTAP29-1A8MX34 341 aaPredicted RBP11.77□□□□□ -0.52
SUDS3-204ENST00000543473 A0A0D9SG42 100 aa11.77□□□□□ -0.52
SUDS3-204ENST00000543473 A0A1B0GU33 70 aa11.76□□□□□ -0.53
SUDS3-204ENST00000543473 CELSR2Q9HCU4 2923 aa11.76□□□□□ -0.53
SUDS3-204ENST00000543473 HRNRQ86YZ3 2850 aaPredicted RBP11.75□□□□□ -0.53
SUDS3-204ENST00000543473 Q5W150 140 aa11.74□□□□□ -0.53
SUDS3-204ENST00000543473 NIPBLQ6KC79 2804 aaeCLIP11.72□□□□□ -0.53
SUDS3-204ENST00000543473 KRTAP1-5Q9BYS1 174 aa11.72□□□□□ -0.53
SUDS3-204ENST00000543473 CRYBG3Q68DQ2 2970 aa11.72□□□□□ -0.53
SUDS3-204ENST00000543473 STAB2Q8WWQ8 2551 aa11.71□□□□□ -0.54
SUDS3-204ENST00000543473 CSAG1Q6PB30 78 aa11.7□□□□□ -0.54
SUDS3-204ENST00000543473 H3BS24 57 aa11.69□□□□□ -0.54
SUDS3-204ENST00000543473 KMT2BQ9UMN6 2715 aaPredicted RBP11.67□□□□□ -0.54
SUDS3-204ENST00000543473 Q6ZR54 194 aa11.65□□□□□ -0.54
SUDS3-204ENST00000543473 NF1P21359 2839 aa11.64□□□□□ -0.55
SUDS3-204ENST00000543473 PLAC8Q9NZF1 115 aa11.64□□□□□ -0.55
SUDS3-204ENST00000543473 LCE6AA0A183 80 aa11.64□□□□□ -0.55
SUDS3-204ENST00000543473 J3QL48 77 aa11.64□□□□□ -0.55
SUDS3-204ENST00000543473 DCHS2Q6V1P9 2916 aa11.63□□□□□ -0.55
SUDS3-204ENST00000543473 TENM4Q6N022 2769 aa11.61□□□□□ -0.55
SUDS3-204ENST00000543473 DMAC1Q96GE9 116 aa11.59□□□□□ -0.55
SUDS3-204ENST00000543473 MUC3AQ02505 3323 aa11.58□□□□□ -0.56
SUDS3-204ENST00000543473 FBN2P35556 2912 aa11.56□□□□□ -0.56
SUDS3-204ENST00000543473 RELNP78509 3460 aa11.51□□□□□ -0.57
SUDS3-204ENST00000543473 LINC00483Q53H64 154 aa11.49□□□□□ -0.57
SUDS3-204ENST00000543473 A6NN06 94 aa11.49□□□□□ -0.57
SUDS3-204ENST00000543473 A8MU10 97 aa11.47□□□□□ -0.57
SUDS3-204ENST00000543473 ASB16-AS1Q495Z4 193 aa11.44□□□□□ -0.58
SUDS3-204ENST00000543473 DMBT1Q9UGM3 2413 aaPredicted RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms