RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 SLC25A34Q6PIV7 304 aa3.17□□□□□ -1.9
CLIP1-217ENST00000543205 DAND5Q8N907 189 aa3.17□□□□□ -1.9
CLIP1-217ENST00000543205 IGKV2D-26A0A0A0MRZ7 120 aa3.16□□□□□ -1.9
CLIP1-217ENST00000543205 ZNF815PA8K554 130 aa3.16□□□□□ -1.9
CLIP1-217ENST00000543205 RPL37AP61513 92 aaKnown RBP3.16□□□□□ -1.9
CLIP1-217ENST00000543205 PHF5AQ7RTV0 110 aaKnown RBP3.16□□□□□ -1.9
CLIP1-217ENST00000543205 C3orf22Q8N5N4 141 aa3.16□□□□□ -1.9
CLIP1-217ENST00000543205 LRP1BQ9NZR2 4599 aa3.16□□□□□ -1.9
CLIP1-217ENST00000543205 MIR7-3HGQ8N6C7 128 aa3.15□□□□□ -1.9
CLIP1-217ENST00000543205 BRK1Q8WUW1 75 aa3.15□□□□□ -1.9
CLIP1-217ENST00000543205 HSPG2P98160 4391 aa3.15□□□□□ -1.9
CLIP1-217ENST00000543205 CFC1P0CG37 223 aa3.15□□□□□ -1.91
CLIP1-217ENST00000543205 UBE2AP49459 152 aa3.15□□□□□ -1.91
CLIP1-217ENST00000543205 UBE2BP63146 152 aa3.15□□□□□ -1.91
CLIP1-217ENST00000543205 TTTY13Q9BZ97 58 aa3.15□□□□□ -1.91
CLIP1-217ENST00000543205 C22orf24Q9Y442 160 aa3.15□□□□□ -1.91
CLIP1-217ENST00000543205 FAM236AA0A1B0GUQ0 79 aa3.14□□□□□ -1.91
CLIP1-217ENST00000543205 FAM236BA0A1B0GV22 79 aa3.14□□□□□ -1.91
CLIP1-217ENST00000543205 KRTAP7-1Q8IUC3 87 aa3.14□□□□□ -1.91
CLIP1-217ENST00000543205 MIEN1Q9BRT3 115 aa3.14□□□□□ -1.91
CLIP1-217ENST00000543205 IGLV1-50A0A075B6I6 118 aa3.14□□□□□ -1.91
CLIP1-217ENST00000543205 J3QR89 54 aa3.14□□□□□ -1.91
CLIP1-217ENST00000543205 TIMM17BO60830 172 aa3.14□□□□□ -1.91
CLIP1-217ENST00000543205 PCP2Q8IVA1 136 aa3.14□□□□□ -1.91
CLIP1-217ENST00000543205 TMEM256-PLSCR3K7ERE1 68 aa3.13□□□□□ -1.91
CLIP1-217ENST00000543205 M0R143 59 aa3.13□□□□□ -1.91
CLIP1-217ENST00000543205 FABP2P12104 132 aa3.13□□□□□ -1.91
CLIP1-217ENST00000543205 NPC2P61916 151 aa3.13□□□□□ -1.91
CLIP1-217ENST00000543205 Q1RN00 199 aa3.13□□□□□ -1.91
CLIP1-217ENST00000543205 LINC00167Q96N53 147 aa3.13□□□□□ -1.91
CLIP1-217ENST00000543205 VAMP8Q9BV40 100 aa3.13□□□□□ -1.91
CLIP1-217ENST00000543205 LOC107984156A0A0G2JMH3 177 aa3.12□□□□□ -1.91
CLIP1-217ENST00000543205 KRTAP10-6P60371 365 aaPredicted RBP3.12□□□□□ -1.91
CLIP1-217ENST00000543205 SPATA45Q537H7 98 aa3.12□□□□□ -1.91
CLIP1-217ENST00000543205 C1orf137Q5JT78 98 aa3.12□□□□□ -1.91
CLIP1-217ENST00000543205 ARL17AQ8IVW1 177 aa3.12□□□□□ -1.91
CLIP1-217ENST00000543205 PSORS1C2Q9UIG4 136 aa3.12□□□□□ -1.91
CLIP1-217ENST00000543205 APOBP04114 4563 aaKnown RBP3.12□□□□□ -1.91
CLIP1-217ENST00000543205 DNAH8Q96JB1 4490 aa3.12□□□□□ -1.91
CLIP1-217ENST00000543205 NCR3O14931 201 aa3.12□□□□□ -1.91
CLIP1-217ENST00000543205 LINC01554Q52M75 96 aa3.12□□□□□ -1.91
CLIP1-217ENST00000543205 Q8NDZ9 215 aa3.12□□□□□ -1.91
CLIP1-217ENST00000543205 LINC00308Q8TCZ7 52 aa3.12□□□□□ -1.91
CLIP1-217ENST00000543205 COPS9Q8WXC6 57 aa3.12□□□□□ -1.91
CLIP1-217ENST00000543205 FLG2Q5D862 2391 aaPredicted RBP3.12□□□□□ -1.91
CLIP1-217ENST00000543205 IGKV2-28A0A075B6P5 120 aa3.11□□□□□ -1.91
CLIP1-217ENST00000543205 CCDC179H3BU77 68 aa3.11□□□□□ -1.91
CLIP1-217ENST00000543205 K7ERJ3 54 aa3.11□□□□□ -1.91
CLIP1-217ENST00000543205 BPY2O14599 106 aa3.11□□□□□ -1.91
CLIP1-217ENST00000543205 IGKV2D-28P01615 120 aa3.11□□□□□ -1.91
CLIP1-217ENST00000543205 COX8AP10176 69 aa3.11□□□□□ -1.91
CLIP1-217ENST00000543205 KRTAP10-4P60372 401 aaPredicted RBP3.11□□□□□ -1.91
CLIP1-217ENST00000543205 PYY3Q5JQD4 70 aa3.11□□□□□ -1.91
CLIP1-217ENST00000543205 KRTAP11-1Q8IUC1 163 aa3.11□□□□□ -1.91
CLIP1-217ENST00000543205 SPANXDQ9BXN6 97 aa3.11□□□□□ -1.91
CLIP1-217ENST00000543205 TRBV7-6A0A0J9YX20 115 aa3.1□□□□□ -1.91
CLIP1-217ENST00000543205 A8MWP4 228 aa3.1□□□□□ -1.91
CLIP1-217ENST00000543205 IFITM1P13164 125 aa3.1□□□□□ -1.91
CLIP1-217ENST00000543205 SOSTDC1Q6X4U4 206 aa3.1□□□□□ -1.91
CLIP1-217ENST00000543205 SNHG12Q9BXW3 62 aa3.1□□□□□ -1.91
CLIP1-217ENST00000543205 TRBV10-2A0A0K0K1G8 114 aa3.1□□□□□ -1.91
CLIP1-217ENST00000543205 IGLV7-43P04211 117 aa3.1□□□□□ -1.91
CLIP1-217ENST00000543205 S100A7L2Q5SY68 101 aa3.1□□□□□ -1.91
CLIP1-217ENST00000543205 MUSTN1Q8IVN3 82 aa3.1□□□□□ -1.91
CLIP1-217ENST00000543205 A6NED7 52 aa3.09□□□□□ -1.91
CLIP1-217ENST00000543205 H3BMG7 143 aa3.09□□□□□ -1.91
CLIP1-217ENST00000543205 BCE1O60756 84 aa3.09□□□□□ -1.91
CLIP1-217ENST00000543205 SPINK6Q6UWN8 80 aa3.09□□□□□ -1.91
CLIP1-217ENST00000543205 TRBV10-3A0A0K0K1G6 114 aa3.09□□□□□ -1.92
CLIP1-217ENST00000543205 ZNF861PO60384 105 aa3.08□□□□□ -1.92
CLIP1-217ENST00000543205 RPL28P46779 137 aaKnown RBP3.08□□□□□ -1.92
CLIP1-217ENST00000543205 TYMSOSQ8TAI1 123 aa3.08□□□□□ -1.92
CLIP1-217ENST00000543205 DIRC1Q969H9 104 aa3.08□□□□□ -1.92
CLIP1-217ENST00000543205 KCNQ1DNQ9H478 68 aa3.08□□□□□ -1.92
CLIP1-217ENST00000543205 MYCBP2O75592 4640 aa3.08□□□□□ -1.92
CLIP1-217ENST00000543205 IGLV6-57P01721 117 aa3.07□□□□□ -1.92
CLIP1-217ENST00000543205 LCE1EQ5T753 118 aa3.07□□□□□ -1.92
CLIP1-217ENST00000543205 HIGD1BQ9P298 99 aa3.07□□□□□ -1.92
CLIP1-217ENST00000543205 VPS13BQ7Z7G8 4022 aa3.07□□□□□ -1.92
CLIP1-217ENST00000543205 TRAV23DV6A0A075B6W5 121 aa3.07□□□□□ -1.92
CLIP1-217ENST00000543205 ETDCA0A1B0GVM5 59 aa3.07□□□□□ -1.92
CLIP1-217ENST00000543205 TRAV13-2A0A0B4J235 113 aa3.06□□□□□ -1.92
CLIP1-217ENST00000543205 K7ERS5 55 aa3.06□□□□□ -1.92
CLIP1-217ENST00000543205 KRTAP5-9P26371 169 aa3.06□□□□□ -1.92
CLIP1-217ENST00000543205 HINT1P49773 126 aaPredicted RBP3.06□□□□□ -1.92
CLIP1-217ENST00000543205 PRLHP81277 87 aa3.06□□□□□ -1.92
CLIP1-217ENST00000543205 UQCR10Q9UDW1 63 aa3.06□□□□□ -1.92
CLIP1-217ENST00000543205 SPRR1AP35321 89 aa3.05□□□□□ -1.92
CLIP1-217ENST00000543205 C2orf91Q6ZV80 131 aa3.05□□□□□ -1.92
CLIP1-217ENST00000543205 KRTAP13-1Q8IUC0 172 aa3.05□□□□□ -1.92
CLIP1-217ENST00000543205 HIGD2AQ9BW72 106 aa3.05□□□□□ -1.92
CLIP1-217ENST00000543205 FAT1Q14517 4588 aa3.04□□□□□ -1.92
CLIP1-217ENST00000543205 HSD52Q0P140 79 aa3.04□□□□□ -1.92
CLIP1-217ENST00000543205 RAB37Q96AX2 223 aa3.04□□□□□ -1.92
CLIP1-217ENST00000543205 PRO1933Q9H354 126 aa3.04□□□□□ -1.92
CLIP1-217ENST00000543205 NDUFAF8A1L188 74 aa3.03□□□□□ -1.92
CLIP1-217ENST00000543205 SLC25A20O43772 301 aa3.03□□□□□ -1.92
CLIP1-217ENST00000543205 Q6ZRX8 168 aa3.03□□□□□ -1.92
CLIP1-217ENST00000543205 LINC01600Q96MT4 127 aa3.03□□□□□ -1.92
CLIP1-217ENST00000543205 COX7BP24311 80 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms