RNA–Protein interactions for RNA: ENST00000543046.1

MDM2-229, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-229ENST00000543046 RP1L1Q8IWN7 2480 aaPredicted RBP2.17□□□□□ -2.06
MDM2-229ENST00000543046 TRANK1O15050 2925 aa2.17□□□□□ -2.06
MDM2-229ENST00000543046 H3BNG1 76 aa2.17□□□□□ -2.06
MDM2-229ENST00000543046 MAP1BP46821 2468 aaKnown RBP2.17□□□□□ -2.06
MDM2-229ENST00000543046 USP34Q70CQ2 3546 aa2.17□□□□□ -2.06
MDM2-229ENST00000543046 PTPRZ1P23471 2315 aaPredicted RBP2.17□□□□□ -2.06
MDM2-229ENST00000543046 AKAP6Q13023 2319 aa2.16□□□□□ -2.06
MDM2-229ENST00000543046 A0A096LPF7 62 aa2.16□□□□□ -2.06
MDM2-229ENST00000543046 LUZP6Q538Z0 58 aa2.16□□□□□ -2.06
MDM2-229ENST00000543046 Q96NJ1 140 aa2.16□□□□□ -2.06
MDM2-229ENST00000543046 CCL19Q99731 98 aa2.16□□□□□ -2.06
MDM2-229ENST00000543046 CHD9Q3L8U1 2897 aa2.16□□□□□ -2.06
MDM2-229ENST00000543046 SPTBN5Q9NRC6 3674 aaKnown RBP2.16□□□□□ -2.06
MDM2-229ENST00000543046 CHD7Q9P2D1 2997 aa2.15□□□□□ -2.07
MDM2-229ENST00000543046 K7ERS5 55 aa2.15□□□□□ -2.07
MDM2-229ENST00000543046 LY6G6CO95867 125 aa2.15□□□□□ -2.07
MDM2-229ENST00000543046 CACNA1HO95180 2353 aa2.14□□□□□ -2.07
MDM2-229ENST00000543046 FRYQ5TBA9 3013 aa2.14□□□□□ -2.07
MDM2-229ENST00000543046 A0A0G2JQZ4 141 aa2.14□□□□□ -2.07
MDM2-229ENST00000543046 A0A1W2PNN7 141 aa2.14□□□□□ -2.07
MDM2-229ENST00000543046 DEFB113Q30KQ7 82 aa2.14□□□□□ -2.07
MDM2-229ENST00000543046 XIRP2A4UGR9 3374 aa2.14□□□□□ -2.07
MDM2-229ENST00000543046 SPART-AS1P0CW21 52 aa2.13□□□□□ -2.07
MDM2-229ENST00000543046 HTTP42858 3142 aa2.13□□□□□ -2.07
MDM2-229ENST00000543046 C5orf42Q9H799 3197 aa2.13□□□□□ -2.07
MDM2-229ENST00000543046 KMT2BQ9UMN6 2715 aaPredicted RBP2.12□□□□□ -2.07
MDM2-229ENST00000543046 NCOR1O75376 2440 aa2.12□□□□□ -2.07
MDM2-229ENST00000543046 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.12□□□□□ -2.071e-6■■■□□ 15.5
MDM2-229ENST00000543046 MKI67P46013 3256 aaKnown RBP2.12□□□□□ -2.07
MDM2-229ENST00000543046 A0A087WTM6 91 aa2.12□□□□□ -2.07
MDM2-229ENST00000543046 LINC01556Q5JQF7 62 aa2.12□□□□□ -2.07
MDM2-229ENST00000543046 ACACAQ13085 2346 aa2.12□□□□□ -2.07
MDM2-229ENST00000543046 C2CD3Q4AC94 2353 aa2.12□□□□□ -2.07
MDM2-229ENST00000543046 CFAP47Q6ZTR5 3102 aa2.11□□□□□ -2.07
MDM2-229ENST00000543046 KALRNO60229 2985 aa2.11□□□□□ -2.07
MDM2-229ENST00000543046 TRIOO75962 3097 aa2.11□□□□□ -2.07
MDM2-229ENST00000543046 CFAP54Q96N23 3096 aa2.11□□□□□ -2.07
MDM2-229ENST00000543046 Q6ZSA8 131 aa2.11□□□□□ -2.07
MDM2-229ENST00000543046 DEFB124Q8NES8 71 aa2.11□□□□□ -2.07
MDM2-229ENST00000543046 TRIOBPQ9H2D6 2365 aa2.1□□□□□ -2.07
MDM2-229ENST00000543046 VPS13AQ96RL7 3174 aa2.1□□□□□ -2.07
MDM2-229ENST00000543046 ABCA2Q9BZC7 2435 aa2.1□□□□□ -2.07
MDM2-229ENST00000543046 SPINT4Q6UDR6 99 aa2.1□□□□□ -2.07
MDM2-229ENST00000543046 FRYLO94915 3013 aa2.09□□□□□ -2.07
MDM2-229ENST00000543046 A0A1B0GU33 70 aa2.09□□□□□ -2.07
MDM2-229ENST00000543046 H0YAA0 97 aa2.09□□□□□ -2.07
MDM2-229ENST00000543046 K7EIL1 84 aa2.09□□□□□ -2.07
MDM2-229ENST00000543046 KRTAP5-8O75690 187 aa2.09□□□□□ -2.07
MDM2-229ENST00000543046 ANKHD1Q8IWZ3 2542 aaKnown RBP2.08□□□□□ -2.08
MDM2-229ENST00000543046 PRLHP81277 87 aa2.08□□□□□ -2.08
MDM2-229ENST00000543046 DSPP15924 2871 aaKnown RBP2.08□□□□□ -2.08
MDM2-229ENST00000543046 AKAP13Q12802 2813 aa2.07□□□□□ -2.08
MDM2-229ENST00000543046 CREBBPQ92793 2442 aa2.07□□□□□ -2.08
MDM2-229ENST00000543046 H1FX-AS1Q4G0G2 97 aa2.07□□□□□ -2.08
MDM2-229ENST00000543046 KRTAP13-2Q52LG2 175 aa2.07□□□□□ -2.08
MDM2-229ENST00000543046 COX6B2Q6YFQ2 88 aa2.07□□□□□ -2.08
MDM2-229ENST00000543046 SSBP3-AS1Q7Z2R9 100 aa2.07□□□□□ -2.08
MDM2-229ENST00000543046 KRTAP13-1Q8IUC0 172 aa2.07□□□□□ -2.08
MDM2-229ENST00000543046 PIEZO2Q9H5I5 2752 aa2.07□□□□□ -2.08
MDM2-229ENST00000543046 SPTAN1Q13813 2472 aaKnown RBP2.07□□□□□ -2.08
MDM2-229ENST00000543046 WDFY3Q8IZQ1 3526 aa2.07□□□□□ -2.08
MDM2-229ENST00000543046 PRUNE2Q8WUY3 3088 aa2.06□□□□□ -2.08
MDM2-229ENST00000543046 CEP290O15078 2479 aa2.06□□□□□ -2.08
MDM2-229ENST00000543046 PSORS1C2Q9UIG4 136 aa2.06□□□□□ -2.08
MDM2-229ENST00000543046 DMDP11532 3685 aa2.06□□□□□ -2.08
MDM2-229ENST00000543046 SPTA1P02549 2419 aa2.06□□□□□ -2.08
MDM2-229ENST00000543046 SPG11Q96JI7 2443 aa2.05□□□□□ -2.08
MDM2-229ENST00000543046 LAMA2P24043 3122 aaKnown RBP2.05□□□□□ -2.08
MDM2-229ENST00000543046 WDFY4Q6ZS81 3184 aa2.05□□□□□ -2.08
MDM2-229ENST00000543046 BRCA2P51587 3418 aa2.05□□□□□ -2.08
MDM2-229ENST00000543046 ZDBF2Q9HCK1 2354 aa2.05□□□□□ -2.08
MDM2-229ENST00000543046 NBDYA0A0U1RRE5 68 aa2.04□□□□□ -2.08
MDM2-229ENST00000543046 ANKRD17O75179 2603 aaKnown RBP2.04□□□□□ -2.08
MDM2-229ENST00000543046 HTN3P15516 51 aa2.04□□□□□ -2.08
MDM2-229ENST00000543046 TPRXLQ17RH7 258 aa2.04□□□□□ -2.08
MDM2-229ENST00000543046 ZFHX4Q86UP3 3567 aa2.04□□□□□ -2.08
MDM2-229ENST00000543046 TENM2Q9NT68 2774 aa2.04□□□□□ -2.08
MDM2-229ENST00000543046 LAMA1P25391 3075 aa2.03□□□□□ -2.08
MDM2-229ENST00000543046 DEFB4AO15263 64 aa2.03□□□□□ -2.08
MDM2-229ENST00000543046 DEFB135Q30KP9 77 aa2.03□□□□□ -2.08
MDM2-229ENST00000543046 VCANP13611 3396 aa2.03□□□□□ -2.08
MDM2-229ENST00000543046 FREM2Q5SZK8 3169 aa2.02□□□□□ -2.09
MDM2-229ENST00000543046 NBASA2RRP1 2371 aa2.02□□□□□ -2.09
MDM2-229ENST00000543046 A0A096LNI7 61 aa2.02□□□□□ -2.09
MDM2-229ENST00000543046 RPL37P61927 97 aaKnown RBP2.02□□□□□ -2.09
MDM2-229ENST00000543046 CRIPTQ9P021 101 aa2.02□□□□□ -2.09
MDM2-229ENST00000543046 REV3LO60673 3130 aa2.02□□□□□ -2.09
MDM2-229ENST00000543046 TACC2O95359 2948 aa2.02□□□□□ -2.09
MDM2-229ENST00000543046 ITPR1Q14643 2758 aa2.02□□□□□ -2.09
MDM2-229ENST00000543046 NCOR2Q9Y618 2525 aa2.01□□□□□ -2.09
MDM2-229ENST00000543046 SPENQ96T58 3664 aaKnown RBP2.01□□□□□ -2.09
MDM2-229ENST00000543046 CSMD1Q96PZ7 3565 aa2.01□□□□□ -2.09
MDM2-229ENST00000543046 LAMA3Q16787 3333 aa2.01□□□□□ -2.09
MDM2-229ENST00000543046 MAP1AP78559 2803 aaPredicted RBP2.01□□□□□ -2.09
MDM2-229ENST00000543046 CHD6Q8TD26 2715 aa2.01□□□□□ -2.09
MDM2-229ENST00000543046 CSPG4Q6UVK1 2322 aa2.01□□□□□ -2.09
MDM2-229ENST00000543046 DMXL2Q8TDJ6 3036 aa2.01□□□□□ -2.09
MDM2-229ENST00000543046 CDH23Q9H251 3354 aa2.01□□□□□ -2.09
MDM2-229ENST00000543046 SPTBN4Q9H254 2564 aa2.01□□□□□ -2.09
MDM2-229ENST00000543046 DCHS1Q96JQ0 3298 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 484.2 ms