RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-223ENST00000542838 BAHCC1Q9P281 2608 aa8.11□□□□□ -1.11
DDX11-223ENST00000542838 CYP4F30PQ9H0H9 118 aa8.11□□□□□ -1.11
DDX11-223ENST00000542838 CMYA5Q8N3K9 4069 aa8.1□□□□□ -1.11
DDX11-223ENST00000542838 MP68P56378 58 aa8.1□□□□□ -1.11
DDX11-223ENST00000542838 NDUFB1O75438 58 aa8.09□□□□□ -1.11
DDX11-223ENST00000542838 Q1T7F1 81 aa8.09□□□□□ -1.11
DDX11-223ENST00000542838 STAB1Q9NY15 2570 aa8.08□□□□□ -1.12
DDX11-223ENST00000542838 MAST4O15021 2626 aa8.08□□□□□ -1.12
DDX11-223ENST00000542838 LINC00208Q96KT6 92 aa8.08□□□□□ -1.12
DDX11-223ENST00000542838 TRAV22A0A0B4J277 110 aa8.07□□□□□ -1.12
DDX11-223ENST00000542838 KRTAP29-1A8MX34 341 aaPredicted RBP8.06□□□□□ -1.12
DDX11-223ENST00000542838 CNBPP62633 177 aaKnown RBP8.06□□□□□ -1.12
DDX11-223ENST00000542838 KRTAP1-5Q9BYS1 174 aa8.06□□□□□ -1.12
DDX11-223ENST00000542838 CASC2Q6XLA1 102 aa8.05□□□□□ -1.12
DDX11-223ENST00000542838 PHF5AQ7RTV0 110 aaKnown RBP8.05□□□□□ -1.12
DDX11-223ENST00000542838 NOTCH1P46531 2555 aa8.05□□□□□ -1.12
DDX11-223ENST00000542838 DNAH3Q8TD57 4116 aa8.04□□□□□ -1.12
DDX11-223ENST00000542838 C1orf195Q5TG92 126 aa8.04□□□□□ -1.12
DDX11-223ENST00000542838 PSPHP1O15172 72 aa8.04□□□□□ -1.12
DDX11-223ENST00000542838 KRTAP11-1Q8IUC1 163 aa8.04□□□□□ -1.12
DDX11-223ENST00000542838 H0Y9P7 68 aa8.04□□□□□ -1.12
DDX11-223ENST00000542838 PRR15Q8IV56 129 aa8.04□□□□□ -1.12
DDX11-223ENST00000542838 CHTF8P0CG12 524 aa8.03□□□□□ -1.12
DDX11-223ENST00000542838 B9D2Q9BPU9 175 aa8.02□□□□□ -1.13
DDX11-223ENST00000542838 A8MWP4 228 aa8.01□□□□□ -1.13
DDX11-223ENST00000542838 SPRR1BP22528 89 aa8.01□□□□□ -1.13
DDX11-223ENST00000542838 DNAH10Q8IVF4 4471 aa8.01□□□□□ -1.13
DDX11-223ENST00000542838 LINC00472Q9H8W2 130 aa8□□□□□ -1.13
DDX11-223ENST00000542838 HUWE1Q7Z6Z7 4374 aaKnown RBP8□□□□□ -1.13
DDX11-223ENST00000542838 FBN1P35555 2871 aaKnown RBP8□□□□□ -1.13
DDX11-223ENST00000542838 H3BPC8 53 aa7.99□□□□□ -1.13
DDX11-223ENST00000542838 H0Y9J4 135 aa7.99□□□□□ -1.13
DDX11-223ENST00000542838 K7EIL1 84 aa7.99□□□□□ -1.13
DDX11-223ENST00000542838 UBE2DNLQ8IWF7 75 aa7.98□□□□□ -1.13
DDX11-223ENST00000542838 SPANXA2-OT1Q8N9U9 137 aa7.98□□□□□ -1.13
DDX11-223ENST00000542838 C14orf177Q52M58 125 aa7.97□□□□□ -1.13
DDX11-223ENST00000542838 V9GYY9 64 aa7.97□□□□□ -1.13
DDX11-223ENST00000542838 NBEAL1Q6ZS30 2694 aa7.96□□□□□ -1.13
DDX11-223ENST00000542838 A8MUN3 132 aa7.96□□□□□ -1.14
DDX11-223ENST00000542838 SRRM2Q9UQ35 2752 aaKnown RBP7.95□□□□□ -1.14
DDX11-223ENST00000542838 COL6A5A8TX70 2615 aa7.94□□□□□ -1.14
DDX11-223ENST00000542838 DNAH9Q9NYC9 4486 aa7.93□□□□□ -1.14
DDX11-223ENST00000542838 MMP24-AS1A0A0U1RRL7 71 aa7.93□□□□□ -1.14
DDX11-223ENST00000542838 C9orf163Q8N9P6 203 aa7.92□□□□□ -1.14
DDX11-223ENST00000542838 LYSTQ99698 3801 aa7.92□□□□□ -1.14
DDX11-223ENST00000542838 Q5VV11 94 aa7.9□□□□□ -1.14
DDX11-223ENST00000542838 Q8N9P0 234 aaPredicted RBP7.9□□□□□ -1.14
DDX11-223ENST00000542838 APLNQ9ULZ1 77 aa7.9□□□□□ -1.14
DDX11-223ENST00000542838 C4orf48Q5BLP8 95 aa7.89□□□□□ -1.15
DDX11-223ENST00000542838 IGLV9-49A0A0B4J1Y8 123 aa7.89□□□□□ -1.15
DDX11-223ENST00000542838 PANO1I0J062 215 aa7.89□□□□□ -1.15
DDX11-223ENST00000542838 KRTAP13-1Q8IUC0 172 aa7.88□□□□□ -1.15
DDX11-223ENST00000542838 LIMD2Q9BT23 127 aa7.87□□□□□ -1.15
DDX11-223ENST00000542838 Q96NJ1 140 aa7.86□□□□□ -1.15
DDX11-223ENST00000542838 IGLV7-46A0A075B6I9 117 aa7.85□□□□□ -1.15
DDX11-223ENST00000542838 PCOTHQ58A44 107 aa7.85□□□□□ -1.15
DDX11-223ENST00000542838 COA5Q86WW8 74 aa7.85□□□□□ -1.15
DDX11-223ENST00000542838 PRR15LQ9BU68 103 aa7.85□□□□□ -1.15
DDX11-223ENST00000542838 CHKB-CPT1BH3BT56 60 aa7.85□□□□□ -1.15
DDX11-223ENST00000542838 CSMD3Q7Z407 3707 aa7.84□□□□□ -1.15
DDX11-223ENST00000542838 A8MU10 97 aa7.84□□□□□ -1.15
DDX11-223ENST00000542838 SEC61GP60059 68 aa7.84□□□□□ -1.15
DDX11-223ENST00000542838 STAB2Q8WWQ8 2551 aa7.83□□□□□ -1.16
DDX11-223ENST00000542838 PMAIP1Q13794 54 aa7.83□□□□□ -1.16
DDX11-223ENST00000542838 MOBPQ13875 183 aa7.83□□□□□ -1.16
DDX11-223ENST00000542838 TP53AIP1Q9HCN2 124 aa7.83□□□□□ -1.16
DDX11-223ENST00000542838 C8orf17Q9NRJ1 99 aa7.83□□□□□ -1.16
DDX11-223ENST00000542838 ASB16-AS1Q495Z4 193 aa7.82□□□□□ -1.16
DDX11-223ENST00000542838 TENM2Q9NT68 2774 aa7.81□□□□□ -1.16
DDX11-223ENST00000542838 NBDYA0A0U1RRE5 68 aa7.81□□□□□ -1.16
DDX11-223ENST00000542838 NDUFS5O43920 106 aa7.81□□□□□ -1.16
DDX11-223ENST00000542838 CD164Q04900 197 aa7.8□□□□□ -1.16
DDX11-223ENST00000542838 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.8□□□□□ -1.16
DDX11-223ENST00000542838 IGHV6-1A0A0B4J1U7 121 aa7.8□□□□□ -1.16
DDX11-223ENST00000542838 SPACA4Q8TDM5 124 aa7.79□□□□□ -1.16
DDX11-223ENST00000542838 Q6ZR54 194 aa7.78□□□□□ -1.16
DDX11-223ENST00000542838 Q6ZRN7 208 aaPredicted RBP7.78□□□□□ -1.16
DDX11-223ENST00000542838 A0A1B0GVX0 72 aa7.78□□□□□ -1.16
DDX11-223ENST00000542838 LINC00483Q53H64 154 aa7.78□□□□□ -1.16
DDX11-223ENST00000542838 COL7A1Q02388 2944 aa7.78□□□□□ -1.16
DDX11-223ENST00000542838 DNAH7Q8WXX0 4024 aa7.77□□□□□ -1.17
DDX11-223ENST00000542838 CDK2AP2O75956 126 aa7.77□□□□□ -1.17
DDX11-223ENST00000542838 MGAM2Q2M2H8 2515 aa7.77□□□□□ -1.17
DDX11-223ENST00000542838 Q75L30 129 aa7.76□□□□□ -1.17
DDX11-223ENST00000542838 MDFIQ99750 246 aa7.76□□□□□ -1.17
DDX11-223ENST00000542838 LOC101927531A0A1B0GV80 90 aa7.75□□□□□ -1.17
DDX11-223ENST00000542838 ZNF706Q9Y5V0 76 aaPredicted RBP7.75□□□□□ -1.17
DDX11-223ENST00000542838 WWC2-AS2Q96NR7 200 aa7.75□□□□□ -1.17
DDX11-223ENST00000542838 MRPL34Q9BQ48 92 aaKnown RBP7.75□□□□□ -1.17
DDX11-223ENST00000542838 A6NED7 52 aa7.74□□□□□ -1.17
DDX11-223ENST00000542838 ANAPC11Q9NYG5 84 aa7.74□□□□□ -1.17
DDX11-223ENST00000542838 DYNC2H1Q8NCM8 4307 aaKnown RBP7.73□□□□□ -1.17
DDX11-223ENST00000542838 SPAG11AQ6PDA7 123 aa7.72□□□□□ -1.17
DDX11-223ENST00000542838 A0A087X002 238 aa7.72□□□□□ -1.17
DDX11-223ENST00000542838 NOTCH2NLQ7Z3S9 236 aa7.72□□□□□ -1.17
DDX11-223ENST00000542838 PSORS1C2Q9UIG4 136 aa7.72□□□□□ -1.17
DDX11-223ENST00000542838 LCA10Q71F78 164 aa7.72□□□□□ -1.17
DDX11-223ENST00000542838 SPTSSBQ8NFR3 76 aa7.72□□□□□ -1.17
DDX11-223ENST00000542838 IGLV5-52A0A0A0MRZ9 124 aa7.7□□□□□ -1.18
DDX11-223ENST00000542838 LINC01558Q9Y6Z2 57 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms