RNA–Protein interactions for RNA: ENST00000542381.1

SRGAP1-204, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 360 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-204ENST00000542381 IQCF6A8MYZ5 107 aa0.75□□□□□ -2.29
SRGAP1-204ENST00000542381 ZZEF1O43149 2961 aa0.75□□□□□ -2.29
SRGAP1-204ENST00000542381 CFDP00746 253 aaPredicted RBP0.75□□□□□ -2.29
SRGAP1-204ENST00000542381 SPINK1P00995 79 aa0.75□□□□□ -2.29
SRGAP1-204ENST00000542381 SMIM11AP58511 58 aa0.75□□□□□ -2.29
SRGAP1-204ENST00000542381 BVES-AS1Q5T3Y7 98 aa0.75□□□□□ -2.29
SRGAP1-204ENST00000542381 C6orf201Q7Z4U5 140 aa0.75□□□□□ -2.29
SRGAP1-204ENST00000542381 LINC00643Q86TS7 51 aa0.75□□□□□ -2.29
SRGAP1-204ENST00000542381 LRRC37AA6NMS7 1700 aa0.75□□□□□ -2.29
SRGAP1-204ENST00000542381 DUOX2Q9NRD8 1548 aa0.74□□□□□ -2.29
SRGAP1-204ENST00000542381 ATP7BP35670 1465 aa0.74□□□□□ -2.29
SRGAP1-204ENST00000542381 HFM1A2PYH4 1435 aa0.74□□□□□ -2.29
SRGAP1-204ENST00000542381 MTORP42345 2549 aa0.74□□□□□ -2.29
SRGAP1-204ENST00000542381 CRYBG3Q68DQ2 2970 aa0.74□□□□□ -2.29
SRGAP1-204ENST00000542381 HIVEP3Q5T1R4 2406 aa0.74□□□□□ -2.29
SRGAP1-204ENST00000542381 NBASA2RRP1 2371 aa0.74□□□□□ -2.29
SRGAP1-204ENST00000542381 KANTRA0A1W2PQU2 76 aa0.74□□□□□ -2.29
SRGAP1-204ENST00000542381 ACYP1P07311 99 aa0.74□□□□□ -2.29
SRGAP1-204ENST00000542381 IGLC2P0DOY2 106 aa0.74□□□□□ -2.29
SRGAP1-204ENST00000542381 IGLC3P0DOY3 106 aa0.74□□□□□ -2.29
SRGAP1-204ENST00000542381 CSMD2Q7Z408 3487 aa0.74□□□□□ -2.29
SRGAP1-204ENST00000542381 SAMD9Q5K651 1589 aa0.74□□□□□ -2.29
SRGAP1-204ENST00000542381 SLIT1O75093 1534 aa0.74□□□□□ -2.29
SRGAP1-204ENST00000542381 CSPG4Q6UVK1 2322 aa0.73□□□□□ -2.29
SRGAP1-204ENST00000542381 CLIP1P30622 1438 aa0.73□□□□□ -2.29
SRGAP1-204ENST00000542381 ANKARQ7Z5J8 1434 aa0.73□□□□□ -2.29
SRGAP1-204ENST00000542381 TLN2Q9Y4G6 2542 aa0.73□□□□□ -2.29
SRGAP1-204ENST00000542381 MYMXA0A1B0GTQ4 84 aa0.73□□□□□ -2.29
SRGAP1-204ENST00000542381 H3BUT2 72 aa0.73□□□□□ -2.29
SRGAP1-204ENST00000542381 LEPROTL1O95214 131 aa0.73□□□□□ -2.29
SRGAP1-204ENST00000542381 UBE2D4Q9Y2X8 147 aa0.73□□□□□ -2.29
SRGAP1-204ENST00000542381 DSPP15924 2871 aaKnown RBP0.73□□□□□ -2.29
SRGAP1-204ENST00000542381 VWFP04275 2813 aa0.73□□□□□ -2.29
SRGAP1-204ENST00000542381 DMXL2Q8TDJ6 3036 aa0.72□□□□□ -2.29
SRGAP1-204ENST00000542381 CHD7Q9P2D1 2997 aa0.72□□□□□ -2.29
SRGAP1-204ENST00000542381 MUC5BQ9HC84 5762 aaPredicted RBP0.72□□□□□ -2.29
SRGAP1-204ENST00000542381 IGSF10Q6WRI0 2623 aa0.72□□□□□ -2.29
SRGAP1-204ENST00000542381 EIF2AK4Q9P2K8 1649 aaKnown RBP0.72□□□□□ -2.29
SRGAP1-204ENST00000542381 INO80Q9ULG1 1556 aaPredicted RBP0.72□□□□□ -2.29
SRGAP1-204ENST00000542381 D6R8Y8 96 aa0.72□□□□□ -2.29
SRGAP1-204ENST00000542381 PLGLAQ15195 96 aa0.72□□□□□ -2.29
SRGAP1-204ENST00000542381 MUSTN1Q8IVN3 82 aa0.72□□□□□ -2.29
SRGAP1-204ENST00000542381 UBR4Q5T4S7 5183 aa0.72□□□□□ -2.29
SRGAP1-204ENST00000542381 ACACAQ13085 2346 aa0.72□□□□□ -2.29
SRGAP1-204ENST00000542381 ITPR2Q14571 2701 aa0.72□□□□□ -2.29
SRGAP1-204ENST00000542381 CLTCL1P53675 1640 aa0.71□□□□□ -2.3
SRGAP1-204ENST00000542381 IQGAP2Q13576 1575 aa0.71□□□□□ -2.3
SRGAP1-204ENST00000542381 BIRC6Q9NR09 4857 aa0.71□□□□□ -2.3
SRGAP1-204ENST00000542381 TRPM2O94759 1503 aa0.71□□□□□ -2.3
SRGAP1-204ENST00000542381 DEFB121Q5J5C9 76 aa0.71□□□□□ -2.3
SRGAP1-204ENST00000542381 C18orf32Q8TCD1 76 aa0.71□□□□□ -2.3
SRGAP1-204ENST00000542381 TJP1Q07157 1748 aa0.71□□□□□ -2.3
SRGAP1-204ENST00000542381 UTP20O75691 2785 aaKnown RBP0.71□□□□□ -2.3
SRGAP1-204ENST00000542381 TGP01266 2768 aa0.71□□□□□ -2.3
SRGAP1-204ENST00000542381 CUBNO60494 3623 aa0.71□□□□□ -2.3
SRGAP1-204ENST00000542381 SYCP2Q9BX26 1530 aa0.7□□□□□ -2.3
SRGAP1-204ENST00000542381 LY75O60449 1722 aa0.7□□□□□ -2.3
SRGAP1-204ENST00000542381 APC2O95996 2303 aa0.7□□□□□ -2.3
SRGAP1-204ENST00000542381 NHSQ6T4R5 1651 aa0.7□□□□□ -2.3
SRGAP1-204ENST00000542381 ACANP16112 2415 aa0.7□□□□□ -2.3
SRGAP1-204ENST00000542381 WNK1Q9H4A3 2382 aa0.7□□□□□ -2.3
SRGAP1-204ENST00000542381 ATMQ13315 3056 aa0.7□□□□□ -2.3
SRGAP1-204ENST00000542381 PLXNC1O60486 1568 aa0.7□□□□□ -2.3
SRGAP1-204ENST00000542381 RYR3Q15413 4870 aa0.7□□□□□ -2.3
SRGAP1-204ENST00000542381 AKAP13Q12802 2813 aa0.7□□□□□ -2.3
SRGAP1-204ENST00000542381 TOGARAM1Q9Y4F4 1720 aa0.69□□□□□ -2.3
SRGAP1-204ENST00000542381 RYR1P21817 5038 aa0.69□□□□□ -2.3
SRGAP1-204ENST00000542381 HIVEP1P15822 2718 aa0.69□□□□□ -2.3
SRGAP1-204ENST00000542381 VPS13CQ709C8 3753 aa0.69□□□□□ -2.3
SRGAP1-204ENST00000542381 MGAM2Q2M2H8 2515 aa0.69□□□□□ -2.3
SRGAP1-204ENST00000542381 CD163L1Q9NR16 1453 aa0.69□□□□□ -2.3
SRGAP1-204ENST00000542381 CEBPZOSA8MTT3 80 aa0.69□□□□□ -2.3
SRGAP1-204ENST00000542381 SMCO4Q9NRQ5 59 aa0.69□□□□□ -2.3
SRGAP1-204ENST00000542381 DDX60LQ5H9U9 1706 aaKnown RBP0.69□□□□□ -2.3
SRGAP1-204ENST00000542381 EPPK1P58107 5090 aaKnown RBP0.69□□□□□ -2.3
SRGAP1-204ENST00000542381 BSNQ9UPA5 3926 aa0.69□□□□□ -2.3
SRGAP1-204ENST00000542381 LMO7Q8WWI1 1683 aa0.69□□□□□ -2.3
SRGAP1-204ENST00000542381 OTOGQ6ZRI0 2925 aa0.68□□□□□ -2.3
SRGAP1-204ENST00000542381 USP9YO00507 2555 aaPredicted RBP0.68□□□□□ -2.3
SRGAP1-204ENST00000542381 KMT2CQ8NEZ4 4911 aaKnown RBP0.68□□□□□ -2.3
SRGAP1-204ENST00000542381 KRTAP21-1Q3LI58 79 aa0.68□□□□□ -2.3
SRGAP1-204ENST00000542381 ADGRG4Q8IZF6 3080 aa0.68□□□□□ -2.3
SRGAP1-204ENST00000542381 CEP295Q9C0D2 2601 aa0.68□□□□□ -2.3
SRGAP1-204ENST00000542381 KIF1AQ12756 1690 aa0.68□□□□□ -2.3
SRGAP1-204ENST00000542381 KIAA1109Q2LD37 5005 aa0.68□□□□□ -2.3
SRGAP1-204ENST00000542381 ALS2Q96Q42 1657 aa0.68□□□□□ -2.3
SRGAP1-204ENST00000542381 NF1P21359 2839 aa0.68□□□□□ -2.3
SRGAP1-204ENST00000542381 HYDINQ4G0P3 5121 aa0.67□□□□□ -2.3
SRGAP1-204ENST00000542381 C4AP0C0L4 1744 aa0.67□□□□□ -2.3
SRGAP1-204ENST00000542381 NIPBLQ6KC79 2804 aaeCLIP0.67□□□□□ -2.3
SRGAP1-204ENST00000542381 CDC42BPGQ6DT37 1551 aa0.67□□□□□ -2.3
SRGAP1-204ENST00000542381 ITPR1Q14643 2758 aa0.67□□□□□ -2.3
SRGAP1-204ENST00000542381 MGAQ8IWI9 3026 aa0.67□□□□□ -2.3
SRGAP1-204ENST00000542381 PDCD5O14737 125 aa0.67□□□□□ -2.3
SRGAP1-204ENST00000542381 COX6B1P14854 86 aa0.67□□□□□ -2.3
SRGAP1-204ENST00000542381 ZANQ9Y493 2812 aa0.67□□□□□ -2.3
SRGAP1-204ENST00000542381 C4BP0C0L5 1744 aa0.67□□□□□ -2.3
SRGAP1-204ENST00000542381 DDX60Q8IY21 1712 aaKnown RBP0.67□□□□□ -2.3
SRGAP1-204ENST00000542381 DCHS2Q6V1P9 2916 aa0.66□□□□□ -2.3
SRGAP1-204ENST00000542381 RYR2Q92736 4967 aa0.66□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms