RNA–Protein interactions for RNA: ENST00000541661.5

SCARB1-207, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 476 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-207ENST00000541661 A0A1B0GV90 55 aa6.94□□□□□ -1.3
SCARB1-207ENST00000541661 H7C2G1 150 aa6.94□□□□□ -1.3
SCARB1-207ENST00000541661 ELOF1P60002 83 aaKnown RBP6.94□□□□□ -1.3
SCARB1-207ENST00000541661 BATFQ16520 125 aa6.94□□□□□ -1.3
SCARB1-207ENST00000541661 COX6B2Q6YFQ2 88 aa6.94□□□□□ -1.3
SCARB1-207ENST00000541661 TTTY13Q9BZ97 58 aa6.94□□□□□ -1.3
SCARB1-207ENST00000541661 OR13C6PQ8NH95 151 aa6.93□□□□□ -1.3
SCARB1-207ENST00000541661 LINC00308Q8TCZ7 52 aa6.93□□□□□ -1.3
SCARB1-207ENST00000541661 TEX49A0A1B0GTD5 131 aa6.92□□□□□ -1.3
SCARB1-207ENST00000541661 A6NDN8 102 aa6.92□□□□□ -1.3
SCARB1-207ENST00000541661 ZNF815PA8K554 130 aa6.92□□□□□ -1.3
SCARB1-207ENST00000541661 COX7BP24311 80 aa6.92□□□□□ -1.3
SCARB1-207ENST00000541661 Q1RN00 199 aa6.92□□□□□ -1.3
SCARB1-207ENST00000541661 SMIM29Q86T20 159 aa6.92□□□□□ -1.3
SCARB1-207ENST00000541661 CEND1Q8N111 149 aa6.92□□□□□ -1.3
SCARB1-207ENST00000541661 LITAFQ99732 161 aa6.92□□□□□ -1.3
SCARB1-207ENST00000541661 SPANXDQ9BXN6 97 aa6.92□□□□□ -1.3
SCARB1-207ENST00000541661 TAX1BP3O14907 124 aa6.91□□□□□ -1.3
SCARB1-207ENST00000541661 TIMM17BO60830 172 aa6.9□□□□□ -1.3
SCARB1-207ENST00000541661 DEFB105AQ8NG35 78 aa6.9□□□□□ -1.3
SCARB1-207ENST00000541661 A0A1B0GWB2 263 aa6.89□□□□□ -1.31
SCARB1-207ENST00000541661 C6orf99Q4VX62 202 aa6.89□□□□□ -1.31
SCARB1-207ENST00000541661 TRBV7-6A0A0J9YX20 115 aa6.88□□□□□ -1.31
SCARB1-207ENST00000541661 SCGB1D4Q6XE38 83 aa6.88□□□□□ -1.31
SCARB1-207ENST00000541661 HIST1H4GQ99525 98 aa6.88□□□□□ -1.31
SCARB1-207ENST00000541661 IGLV5-48A0A075B6I7 105 aa6.87□□□□□ -1.31
SCARB1-207ENST00000541661 FXYD2P54710 66 aa6.87□□□□□ -1.31
SCARB1-207ENST00000541661 Q6ZVH6 145 aa6.87□□□□□ -1.31
SCARB1-207ENST00000541661 C9orf118A6NHY6 69 aa6.86□□□□□ -1.31
SCARB1-207ENST00000541661 KRTAP9-7A8MTY7 169 aa6.86□□□□□ -1.31
SCARB1-207ENST00000541661 A0A0G2JQZ4 141 aa6.85□□□□□ -1.31
SCARB1-207ENST00000541661 TMEM238LA0A1B0GVL6 79 aa6.85□□□□□ -1.31
SCARB1-207ENST00000541661 A6NJY4 79 aa6.85□□□□□ -1.31
SCARB1-207ENST00000541661 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.85□□□□□ -1.31
SCARB1-207ENST00000541661 TCL1BO95988 128 aa6.83□□□□□ -1.32
SCARB1-207ENST00000541661 IFITM1P13164 125 aa6.82□□□□□ -1.32
SCARB1-207ENST00000541661 UBE2V1Q13404 147 aa6.82□□□□□ -1.32
SCARB1-207ENST00000541661 NHP2Q9NX24 153 aaKnown RBP6.81□□□□□ -1.32
SCARB1-207ENST00000541661 SSPOA2VEC9 5147 aa6.8□□□□□ -1.32
SCARB1-207ENST00000541661 USH2AO75445 5202 aa6.79□□□□□ -1.32
SCARB1-207ENST00000541661 CFC1P0CG37 223 aa6.79□□□□□ -1.32
SCARB1-207ENST00000541661 MUSTN1Q8IVN3 82 aa6.79□□□□□ -1.32
SCARB1-207ENST00000541661 COPS9Q8WXC6 57 aa6.79□□□□□ -1.32
SCARB1-207ENST00000541661 A0A0B4J2C4 111 aa6.78□□□□□ -1.32
SCARB1-207ENST00000541661 A0A1W2PPM0 123 aa6.78□□□□□ -1.32
SCARB1-207ENST00000541661 A4D1N5 150 aa6.78□□□□□ -1.32
SCARB1-207ENST00000541661 H3BUT2 72 aa6.78□□□□□ -1.32
SCARB1-207ENST00000541661 VAMP3Q15836 100 aa6.78□□□□□ -1.32
SCARB1-207ENST00000541661 Q6Q795 121 aa6.78□□□□□ -1.32
SCARB1-207ENST00000541661 ATP11AUNQ6ZP68 121 aa6.77□□□□□ -1.33
SCARB1-207ENST00000541661 GTF2H5Q6ZYL4 71 aa6.77□□□□□ -1.33
SCARB1-207ENST00000541661 Q75L30 129 aa6.77□□□□□ -1.33
SCARB1-207ENST00000541661 KRTAP9-8Q9BYQ0 159 aa6.77□□□□□ -1.33
SCARB1-207ENST00000541661 K7ERJ3 54 aa6.76□□□□□ -1.33
SCARB1-207ENST00000541661 FABP2P12104 132 aa6.76□□□□□ -1.33
SCARB1-207ENST00000541661 RAB37Q96AX2 223 aa6.76□□□□□ -1.33
SCARB1-207ENST00000541661 PRO1854Q9UHT4 67 aa6.76□□□□□ -1.33
SCARB1-207ENST00000541661 K7EP34 96 aa6.75□□□□□ -1.33
SCARB1-207ENST00000541661 OBSCN-AS1Q96MR7 158 aa6.73□□□□□ -1.33
SCARB1-207ENST00000541661 F8WEM9 126 aa6.72□□□□□ -1.33
SCARB1-207ENST00000541661 LYRM7Q5U5X0 104 aa6.72□□□□□ -1.33
SCARB1-207ENST00000541661 SPCS1Q9Y6A9 102 aa6.72□□□□□ -1.33
SCARB1-207ENST00000541661 TRBV7-7A0A0K0K1E9 115 aa6.71□□□□□ -1.34
SCARB1-207ENST00000541661 Q6JHZ5 121 aa6.71□□□□□ -1.34
SCARB1-207ENST00000541661 SMIM11BQ8TCY0 68 aa6.71□□□□□ -1.34
SCARB1-207ENST00000541661 TRBV20-1A0A075B6N2 111 aa6.7□□□□□ -1.34
SCARB1-207ENST00000541661 CLEC2BQ92478 149 aa6.7□□□□□ -1.34
SCARB1-207ENST00000541661 NAA38Q9BRA0 125 aaKnown RBP6.7□□□□□ -1.34
SCARB1-207ENST00000541661 TRAV13-2A0A0B4J235 113 aa6.69□□□□□ -1.34
SCARB1-207ENST00000541661 IGFL1Q6UW32 110 aa6.69□□□□□ -1.34
SCARB1-207ENST00000541661 FCGBPQ9Y6R7 5405 aaPredicted RBP6.69□□□□□ -1.34
SCARB1-207ENST00000541661 LINC00575Q6W349 94 aa6.68□□□□□ -1.34
SCARB1-207ENST00000541661 F8W1H4 67 aa6.67□□□□□ -1.34
SCARB1-207ENST00000541661 OCIAD2Q56VL3 154 aa6.67□□□□□ -1.34
SCARB1-207ENST00000541661 Q6ZQY7 126 aa6.66□□□□□ -1.34
SCARB1-207ENST00000541661 Q96NJ1 140 aa6.66□□□□□ -1.34
SCARB1-207ENST00000541661 C20orf166-AS1Q96NR2 134 aa6.66□□□□□ -1.34
SCARB1-207ENST00000541661 hADV29S1A0JD25 119 aa6.64□□□□□ -1.35
SCARB1-207ENST00000541661 COX6CP09669 75 aa6.64□□□□□ -1.35
SCARB1-207ENST00000541661 PRO0461Q9UI25 63 aa6.64□□□□□ -1.35
SCARB1-207ENST00000541661 A8MUU9 505 aa6.63□□□□□ -1.35
SCARB1-207ENST00000541661 H3BMG7 143 aa6.63□□□□□ -1.35
SCARB1-207ENST00000541661 LST1O00453 97 aa6.63□□□□□ -1.35
SCARB1-207ENST00000541661 SCGB1C2P0DMR2 95 aa6.63□□□□□ -1.35
SCARB1-207ENST00000541661 TRIAP1O43715 76 aa6.62□□□□□ -1.35
SCARB1-207ENST00000541661 MT2AP02795 61 aa6.62□□□□□ -1.35
SCARB1-207ENST00000541661 PSMB2P49721 201 aa6.62□□□□□ -1.35
SCARB1-207ENST00000541661 KRTAP19-1Q8IUB9 90 aa6.61□□□□□ -1.35
SCARB1-207ENST00000541661 PPDPFLQ8WWR9 84 aa6.61□□□□□ -1.35
SCARB1-207ENST00000541661 LCE2BO14633 110 aa6.6□□□□□ -1.35
SCARB1-207ENST00000541661 ATXN8Q156A1 80 aa6.6□□□□□ -1.35
SCARB1-207ENST00000541661 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.6□□□□□ -1.35
SCARB1-207ENST00000541661 SMCPP49901 116 aaPredicted RBP6.57□□□□□ -1.36
SCARB1-207ENST00000541661 KRTAP9-3Q9BYQ3 159 aa6.57□□□□□ -1.36
SCARB1-207ENST00000541661 SS18L2Q9UHA2 77 aa6.57□□□□□ -1.36
SCARB1-207ENST00000541661 MACF1Q9UPN3 7388 aaKnown RBP6.57□□□□□ -1.36
SCARB1-207ENST00000541661 H0YGX0 51 aa6.56□□□□□ -1.36
SCARB1-207ENST00000541661 MT1FP04733 61 aa6.56□□□□□ -1.36
SCARB1-207ENST00000541661 K7ERU9 68 aa6.55□□□□□ -1.36
SCARB1-207ENST00000541661 TRACP01848 142 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 127.4 ms