RNA–Protein interactions for RNA: ENST00000541216.1

RAP1B-224, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAP1B, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-224ENST00000541216 WHAMMP3Q1A5X7 153 aa0.48□□□□□ -2.33
RAP1B-224ENST00000541216 KRTAP19-5Q3LI72 72 aa0.48□□□□□ -2.33
RAP1B-224ENST00000541216 FAM74A1Q5RGS3 127 aa0.48□□□□□ -2.33
RAP1B-224ENST00000541216 TMEM91Q6ZNR0 172 aa0.48□□□□□ -2.33
RAP1B-224ENST00000541216 DEFB107AQ8IZN7 70 aa0.48□□□□□ -2.33
RAP1B-224ENST00000541216 RPL39LQ96EH5 51 aaKnown RBP0.48□□□□□ -2.33
RAP1B-224ENST00000541216 RNASE7Q9H1E1 156 aaKnown RBP0.48□□□□□ -2.33
RAP1B-224ENST00000541216 PRO1933Q9H354 126 aa0.48□□□□□ -2.33
RAP1B-224ENST00000541216 PSENENQ9NZ42 101 aa0.48□□□□□ -2.33
RAP1B-224ENST00000541216 TRAV9-1A0A075B6T8 112 aa0.47□□□□□ -2.33
RAP1B-224ENST00000541216 SSSCA1O60232 199 aa0.47□□□□□ -2.33
RAP1B-224ENST00000541216 SPRR1AP35321 89 aa0.47□□□□□ -2.33
RAP1B-224ENST00000541216 SULT1A1P50225 295 aa0.47□□□□□ -2.33
RAP1B-224ENST00000541216 CRIP1P50238 77 aa0.47□□□□□ -2.33
RAP1B-224ENST00000541216 SCGB2B2Q4G0G5 96 aa0.47□□□□□ -2.33
RAP1B-224ENST00000541216 ALKAL2Q6UX46 152 aa0.47□□□□□ -2.33
RAP1B-224ENST00000541216 CRIPTQ9P021 101 aa0.47□□□□□ -2.33
RAP1B-224ENST00000541216 LSM5Q9Y4Y9 91 aaKnown RBP0.47□□□□□ -2.33
RAP1B-224ENST00000541216 D6R8Y8 96 aa0.46□□□□□ -2.34
RAP1B-224ENST00000541216 I3L3M4 83 aa0.46□□□□□ -2.34
RAP1B-224ENST00000541216 SLC25A6P12236 298 aa0.46□□□□□ -2.34
RAP1B-224ENST00000541216 NDUFA6P56556 154 aa0.46□□□□□ -2.34
RAP1B-224ENST00000541216 RHEBQ15382 184 aa0.46□□□□□ -2.34
RAP1B-224ENST00000541216 KRTAP6-1Q3LI64 71 aa0.46□□□□□ -2.34
RAP1B-224ENST00000541216 TMEM14EPQ6UXP3 125 aa0.46□□□□□ -2.34
RAP1B-224ENST00000541216 SNX29P2Q8IUI4 249 aa0.46□□□□□ -2.34
RAP1B-224ENST00000541216 Q8IZM0 81 aa0.46□□□□□ -2.34
RAP1B-224ENST00000541216 OR5H6Q8NGV6 325 aa0.46□□□□□ -2.34
RAP1B-224ENST00000541216 AP3S1Q92572 193 aa0.46□□□□□ -2.34
RAP1B-224ENST00000541216 TOMM6Q96B49 74 aa0.46□□□□□ -2.34
RAP1B-224ENST00000541216 LAMTOR3Q9UHA4 124 aa0.46□□□□□ -2.34
RAP1B-224ENST00000541216 F8WEM9 126 aa0.45□□□□□ -2.34
RAP1B-224ENST00000541216 NCR3O14931 201 aa0.45□□□□□ -2.34
RAP1B-224ENST00000541216 INE1O15225 51 aa0.45□□□□□ -2.34
RAP1B-224ENST00000541216 IFNA1P01562 189 aa0.45□□□□□ -2.34
RAP1B-224ENST00000541216 AKR1D1P51857 326 aa0.45□□□□□ -2.34
RAP1B-224ENST00000541216 HBBP68871 147 aa0.45□□□□□ -2.34
RAP1B-224ENST00000541216 KHDC3LQ587J8 217 aa0.45□□□□□ -2.34
RAP1B-224ENST00000541216 RNASE10Q5GAN6 216 aaKnown RBP0.45□□□□□ -2.34
RAP1B-224ENST00000541216 Q6ZRX8 168 aa0.45□□□□□ -2.34
RAP1B-224ENST00000541216 C5orf17Q8NAS9 161 aa0.45□□□□□ -2.34
RAP1B-224ENST00000541216 KCNQ1DNQ9H478 68 aa0.45□□□□□ -2.34
RAP1B-224ENST00000541216 GSKIPQ9P0R6 139 aa0.45□□□□□ -2.34
RAP1B-224ENST00000541216 TRAV1-2A0A0B4J238 106 aa0.44□□□□□ -2.34
RAP1B-224ENST00000541216 TRAV12-1A0A0B4J245 112 aa0.44□□□□□ -2.34
RAP1B-224ENST00000541216 TRBV10-3A0A0K0K1G6 114 aa0.44□□□□□ -2.34
RAP1B-224ENST00000541216 CD3DP04234 171 aa0.44□□□□□ -2.34
RAP1B-224ENST00000541216 BAALC-AS2P0C853 105 aa0.44□□□□□ -2.34
RAP1B-224ENST00000541216 SPRR1BP22528 89 aa0.44□□□□□ -2.34
RAP1B-224ENST00000541216 FCER1GP30273 86 aa0.44□□□□□ -2.34
RAP1B-224ENST00000541216 CSAG1Q6PB30 78 aa0.44□□□□□ -2.34
RAP1B-224ENST00000541216 PYDC1Q8WXC3 89 aa0.44□□□□□ -2.34
RAP1B-224ENST00000541216 GGACTQ9BVM4 153 aa0.44□□□□□ -2.34
RAP1B-224ENST00000541216 NPCDR1Q9BY65 106 aa0.44□□□□□ -2.34
RAP1B-224ENST00000541216 LSM2Q9Y333 95 aaKnown RBP0.44□□□□□ -2.34
RAP1B-224ENST00000541216 HMGB3O15347 200 aaKnown RBP0.43□□□□□ -2.34
RAP1B-224ENST00000541216 RPL39P62891 51 aaKnown RBP0.43□□□□□ -2.34
RAP1B-224ENST00000541216 DEFB105AQ8NG35 78 aa0.43□□□□□ -2.34
RAP1B-224ENST00000541216 ANP32BQ92688 251 aaKnown RBP0.43□□□□□ -2.34
RAP1B-224ENST00000541216 FAM107BQ9H098 131 aa0.43□□□□□ -2.34
RAP1B-224ENST00000541216 EPDR1Q9UM22 224 aa0.43□□□□□ -2.34
RAP1B-224ENST00000541216 LOC100130705A0A1B0GUX0 176 aa0.42□□□□□ -2.34
RAP1B-224ENST00000541216 TCRBV3S1A0A5B6 114 aa0.42□□□□□ -2.34
RAP1B-224ENST00000541216 MT1AP04731 61 aa0.42□□□□□ -2.34
RAP1B-224ENST00000541216 S100A12P80511 92 aa0.42□□□□□ -2.34
RAP1B-224ENST00000541216 LINC00299Q6ZSB3 139 aa0.42□□□□□ -2.34
RAP1B-224ENST00000541216 HIST3H2BBQ8N257 126 aa0.42□□□□□ -2.34
RAP1B-224ENST00000541216 SFT2D1Q8WV19 159 aa0.42□□□□□ -2.34
RAP1B-224ENST00000541216 AMELXQ99217 191 aa0.42□□□□□ -2.34
RAP1B-224ENST00000541216 SIGMAR1Q99720 223 aa0.42□□□□□ -2.34
RAP1B-224ENST00000541216 MRPS26Q9BYN8 205 aaKnown RBP0.42□□□□□ -2.34
RAP1B-224ENST00000541216 TMEM191AQ9H0A3 160 aa0.42□□□□□ -2.34
RAP1B-224ENST00000541216 ST20Q9HBF5 79 aa0.42□□□□□ -2.34
RAP1B-224ENST00000541216 S4R3F8 94 aa0.42□□□□□ -2.34
RAP1B-224ENST00000541216 A0A087WXM4 84 aa0.41□□□□□ -2.34
RAP1B-224ENST00000541216 TRBV7-7A0A0K0K1E9 115 aa0.41□□□□□ -2.34
RAP1B-224ENST00000541216 UBE2G1P62253 170 aa0.41□□□□□ -2.34
RAP1B-224ENST00000541216 LINC01554Q52M75 96 aa0.41□□□□□ -2.34
RAP1B-224ENST00000541216 CROCCP2Q86T23 111 aa0.41□□□□□ -2.34
RAP1B-224ENST00000541216 ANKRD29Q8N6D5 301 aa0.41□□□□□ -2.34
RAP1B-224ENST00000541216 COX7B2Q8TF08 81 aa0.41□□□□□ -2.34
RAP1B-224ENST00000541216 S100A16Q96FQ6 103 aaKnown RBP0.41□□□□□ -2.34
RAP1B-224ENST00000541216 SPANXA1Q9NS26 97 aa0.41□□□□□ -2.34
RAP1B-224ENST00000541216 SCP2D1Q9UJQ7 156 aa0.41□□□□□ -2.34
RAP1B-224ENST00000541216 TRBV27A0A0K0K1C4 114 aa0.4□□□□□ -2.35
RAP1B-224ENST00000541216 IGLC6P0CF74 106 aa0.4□□□□□ -2.35
RAP1B-224ENST00000541216 MRPS36P82909 103 aaKnown RBP0.4□□□□□ -2.35
RAP1B-224ENST00000541216 NHP2Q9NX24 153 aaKnown RBP0.4□□□□□ -2.35
RAP1B-224ENST00000541216 CDKN2A-AS1Q9UH64 79 aa0.4□□□□□ -2.35
RAP1B-224ENST00000541216 ERG28Q9UKR5 140 aa0.4□□□□□ -2.35
RAP1B-224ENST00000541216 PIGBOS1A0A0B4J2F0 54 aa0.39□□□□□ -2.35
RAP1B-224ENST00000541216 TRDV1A0A1B0GX56 115 aa0.39□□□□□ -2.35
RAP1B-224ENST00000541216 ATP5HO75947 161 aa0.39□□□□□ -2.35
RAP1B-224ENST00000541216 SDC2P34741 201 aa0.39□□□□□ -2.35
RAP1B-224ENST00000541216 RPL35P42766 123 aaKnown RBP0.39□□□□□ -2.35
RAP1B-224ENST00000541216 POLR2KP53803 58 aaKnown RBP0.39□□□□□ -2.35
RAP1B-224ENST00000541216 TEX261Q6UWH6 196 aa0.39□□□□□ -2.35
RAP1B-224ENST00000541216 STX12Q86Y82 276 aa0.39□□□□□ -2.35
RAP1B-224ENST00000541216 C2orf88Q9BSF0 95 aa0.39□□□□□ -2.35
RAP1B-224ENST00000541216 TRAV23DV6A0A075B6W5 121 aa0.38□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms