RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 H3BQ85 93 aa10.9□□□□□ -0.66
VPS33A-205ENST00000541169 TSPAN13O95857 204 aa10.9□□□□□ -0.66
VPS33A-205ENST00000541169 RPS29P62273 56 aaKnown RBP10.9□□□□□ -0.66
VPS33A-205ENST00000541169 Q8N377 158 aa10.9□□□□□ -0.66
VPS33A-205ENST00000541169 F8WEM9 126 aa10.89□□□□□ -0.67
VPS33A-205ENST00000541169 SMIM29Q86T20 159 aa10.87□□□□□ -0.67
VPS33A-205ENST00000541169 HERC1Q15751 4861 aa10.86□□□□□ -0.67
VPS33A-205ENST00000541169 DNAL4O96015 105 aa10.85□□□□□ -0.67
VPS33A-205ENST00000541169 SNHG12Q9BXW3 62 aa10.85□□□□□ -0.67
VPS33A-205ENST00000541169 CD164Q04900 197 aa10.84□□□□□ -0.67
VPS33A-205ENST00000541169 FAM218AQ96MZ4 157 aa10.84□□□□□ -0.67
VPS33A-205ENST00000541169 SCGB1C2P0DMR2 95 aa10.83□□□□□ -0.68
VPS33A-205ENST00000541169 Q6JHZ5 121 aa10.82□□□□□ -0.68
VPS33A-205ENST00000541169 IGLV8-61A0A075B6I0 122 aa10.8□□□□□ -0.68
VPS33A-205ENST00000541169 LYRM7Q5U5X0 104 aa10.8□□□□□ -0.68
VPS33A-205ENST00000541169 CLEC2BQ92478 149 aa10.8□□□□□ -0.68
VPS33A-205ENST00000541169 TRACP01848 142 aa10.79□□□□□ -0.68
VPS33A-205ENST00000541169 ORMDL1Q9P0S3 153 aa10.79□□□□□ -0.68
VPS33A-205ENST00000541169 LIMD2Q9BT23 127 aa10.78□□□□□ -0.68
VPS33A-205ENST00000541169 TMEM256-PLSCR3K7ERE1 68 aa10.77□□□□□ -0.69
VPS33A-205ENST00000541169 BATFQ16520 125 aa10.77□□□□□ -0.69
VPS33A-205ENST00000541169 PRR4Q16378 134 aa10.76□□□□□ -0.69
VPS33A-205ENST00000541169 LST1O00453 97 aa10.75□□□□□ -0.69
VPS33A-205ENST00000541169 FP248Q71RG6 208 aaPredicted RBP10.75□□□□□ -0.69
VPS33A-205ENST00000541169 FABP2P12104 132 aa10.74□□□□□ -0.69
VPS33A-205ENST00000541169 NDUFV3P56181 108 aaKnown RBP10.74□□□□□ -0.69
VPS33A-205ENST00000541169 ATXN8Q156A1 80 aa10.72□□□□□ -0.69
VPS33A-205ENST00000541169 Q5XG85 94 aa10.72□□□□□ -0.69
VPS33A-205ENST00000541169 TRBV20-1A0A075B6N2 111 aa10.71□□□□□ -0.69
VPS33A-205ENST00000541169 UBE2V1Q13404 147 aa10.69□□□□□ -0.7
VPS33A-205ENST00000541169 H3BMG7 143 aa10.68□□□□□ -0.7
VPS33A-205ENST00000541169 C9orf118A6NHY6 69 aa10.67□□□□□ -0.7
VPS33A-205ENST00000541169 TCL1BO95988 128 aa10.67□□□□□ -0.7
VPS33A-205ENST00000541169 IGFL1Q6UW32 110 aa10.67□□□□□ -0.7
VPS33A-205ENST00000541169 HRCT1Q6UXD1 115 aa10.67□□□□□ -0.7
VPS33A-205ENST00000541169 RETNLBQ9BQ08 111 aa10.66□□□□□ -0.7
VPS33A-205ENST00000541169 IGLV7-46A0A075B6I9 117 aa10.65□□□□□ -0.7
VPS33A-205ENST00000541169 H3BUT2 72 aa10.65□□□□□ -0.7
VPS33A-205ENST00000541169 Q6Q795 121 aa10.64□□□□□ -0.71
VPS33A-205ENST00000541169 COL5A1-AS1Q5SY13 56 aa10.63□□□□□ -0.71
VPS33A-205ENST00000541169 NAA38Q9BRA0 125 aaKnown RBP10.63□□□□□ -0.71
VPS33A-205ENST00000541169 TAX1BP3O14907 124 aa10.62□□□□□ -0.71
VPS33A-205ENST00000541169 TPRXLQ17RH7 258 aa10.62□□□□□ -0.71
VPS33A-205ENST00000541169 TEN1Q86WV5 123 aa10.62□□□□□ -0.71
VPS33A-205ENST00000541169 TRBV7-7A0A0K0K1E9 115 aa10.61□□□□□ -0.71
VPS33A-205ENST00000541169 BAALC-AS2P0C853 105 aa10.61□□□□□ -0.71
VPS33A-205ENST00000541169 A0A1W2PPM0 123 aa10.6□□□□□ -0.71
VPS33A-205ENST00000541169 HMCN2Q8NDA2 5059 aa10.59□□□□□ -0.71
VPS33A-205ENST00000541169 A0A0G2JQZ4 141 aa10.59□□□□□ -0.71
VPS33A-205ENST00000541169 ASB16-AS1Q495Z4 193 aa10.59□□□□□ -0.71
VPS33A-205ENST00000541169 ANKRD29Q8N6D5 301 aa10.59□□□□□ -0.71
VPS33A-205ENST00000541169 SS18L2Q9UHA2 77 aa10.58□□□□□ -0.72
VPS33A-205ENST00000541169 RBM3P98179 157 aaKnown RBP10.56□□□□□ -0.72
VPS33A-205ENST00000541169 JMJD7-PLA2G4BH0Y9G9 81 aa10.55□□□□□ -0.72
VPS33A-205ENST00000541169 DSCR8Q96T75 97 aa10.54□□□□□ -0.72
VPS33A-205ENST00000541169 TRBV7-4A0A0J9YYF1 115 aa10.53□□□□□ -0.72
VPS33A-205ENST00000541169 PCP4L1A6NKN8 68 aa10.53□□□□□ -0.72
VPS33A-205ENST00000541169 C21orf62-AS1Q17RA5 79 aa10.53□□□□□ -0.72
VPS33A-205ENST00000541169 C1orf195Q5TG92 126 aa10.52□□□□□ -0.73
VPS33A-205ENST00000541169 CDIP1Q9H305 208 aa10.52□□□□□ -0.73
VPS33A-205ENST00000541169 C9JAW5 83 aa10.51□□□□□ -0.73
VPS33A-205ENST00000541169 PDE6GP18545 87 aa10.5□□□□□ -0.73
VPS33A-205ENST00000541169 H3BT86 120 aa10.49□□□□□ -0.73
VPS33A-205ENST00000541169 KRTAP13-3Q3SY46 172 aa10.49□□□□□ -0.73
VPS33A-205ENST00000541169 LCE2DQ5TA82 110 aaPredicted RBP10.49□□□□□ -0.73
VPS33A-205ENST00000541169 CCKP06307 115 aa10.48□□□□□ -0.73
VPS33A-205ENST00000541169 SPCS1Q9Y6A9 102 aa10.48□□□□□ -0.73
VPS33A-205ENST00000541169 A0A1W2PNM2 257 aa10.47□□□□□ -0.73
VPS33A-205ENST00000541169 A0A087WSZ3 146 aa10.46□□□□□ -0.73
VPS33A-205ENST00000541169 A0A1B0GW54 56 aa10.46□□□□□ -0.73
VPS33A-205ENST00000541169 A0A1B0GV72 72 aa10.45□□□□□ -0.74
VPS33A-205ENST00000541169 LOC110117498A0A087WWA1 95 aa10.42□□□□□ -0.74
VPS33A-205ENST00000541169 OBSCN-AS1Q96MR7 158 aa10.42□□□□□ -0.74
VPS33A-205ENST00000541169 GTF2H5Q6ZYL4 71 aa10.39□□□□□ -0.75
VPS33A-205ENST00000541169 VPS25Q9BRG1 176 aa10.38□□□□□ -0.75
VPS33A-205ENST00000541169 LRP2P98164 4655 aa10.38□□□□□ -0.75
VPS33A-205ENST00000541169 K7EP34 96 aa10.37□□□□□ -0.75
VPS33A-205ENST00000541169 Q6ZQT0 140 aa10.37□□□□□ -0.75
VPS33A-205ENST00000541169 C14orf132Q9NPU4 83 aa10.34□□□□□ -0.75
VPS33A-205ENST00000541169 XP32Q5T750 250 aa10.33□□□□□ -0.76
VPS33A-205ENST00000541169 SEC61BP60468 96 aaKnown RBP10.31□□□□□ -0.76
VPS33A-205ENST00000541169 LPAP08519 4548 aa10.3□□□□□ -0.76
VPS33A-205ENST00000541169 MTURNQ8N3F0 131 aa10.3□□□□□ -0.76
VPS33A-205ENST00000541169 Q96NJ1 140 aa10.3□□□□□ -0.76
VPS33A-205ENST00000541169 C9orf92A6NGG3 77 aa10.28□□□□□ -0.76
VPS33A-205ENST00000541169 J3KT08 172 aa10.28□□□□□ -0.76
VPS33A-205ENST00000541169 LINC00472Q9H8W2 130 aa10.28□□□□□ -0.76
VPS33A-205ENST00000541169 F8W1H4 67 aa10.27□□□□□ -0.77
VPS33A-205ENST00000541169 IGKV4-1P06312 121 aa10.26□□□□□ -0.77
VPS33A-205ENST00000541169 PRO0461Q9UI25 63 aa10.26□□□□□ -0.77
VPS33A-205ENST00000541169 UBR4Q5T4S7 5183 aa10.25□□□□□ -0.77
VPS33A-205ENST00000541169 SIGMAR1Q99720 223 aa10.25□□□□□ -0.77
VPS33A-205ENST00000541169 SMCPP49901 116 aaPredicted RBP10.24□□□□□ -0.77
VPS33A-205ENST00000541169 NREPQ16612 68 aa10.19□□□□□ -0.78
VPS33A-205ENST00000541169 NDUFB1O75438 58 aa10.17□□□□□ -0.78
VPS33A-205ENST00000541169 LINC00313P59037 77 aa10.16□□□□□ -0.78
VPS33A-205ENST00000541169 RPL37P61927 97 aaKnown RBP10.16□□□□□ -0.78
VPS33A-205ENST00000541169 DEFB116Q30KQ4 102 aa10.15□□□□□ -0.78
VPS33A-205ENST00000541169 C8orf87E5RJ46 101 aa10.14□□□□□ -0.79
VPS33A-205ENST00000541169 Q75L30 129 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms