RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.15□□□□□ -0.95
SMARCA4-207ENST00000541122 CDH23Q9H251 3354 aa9.14□□□□□ -0.95
SMARCA4-207ENST00000541122 Q6ZR54 194 aa9.13□□□□□ -0.95
SMARCA4-207ENST00000541122 KRTAP26-1Q6PEX3 210 aa9.13□□□□□ -0.95
SMARCA4-207ENST00000541122 SZT2Q5T011 3432 aa9.12□□□□□ -0.95
SMARCA4-207ENST00000541122 PLAC8Q9NZF1 115 aa9.12□□□□□ -0.95
SMARCA4-207ENST00000541122 KRTAP29-1A8MX34 341 aaPredicted RBP9.11□□□□□ -0.95
SMARCA4-207ENST00000541122 LAMA2P24043 3122 aaKnown RBP9.11□□□□□ -0.95
SMARCA4-207ENST00000541122 COX6B2Q6YFQ2 88 aa9.09□□□□□ -0.95
SMARCA4-207ENST00000541122 FASNP49327 2511 aaKnown RBP9.08□□□□□ -0.96
SMARCA4-207ENST00000541122 KRTAP4-16G5E9R7 235 aaPredicted RBP9.06□□□□□ -0.96
SMARCA4-207ENST00000541122 LCE6AA0A183 80 aa9.04□□□□□ -0.96
SMARCA4-207ENST00000541122 SMR3BP02814 79 aaPredicted RBP9.03□□□□□ -0.96
SMARCA4-207ENST00000541122 COL6A3P12111 3177 aa9.01□□□□□ -0.97
SMARCA4-207ENST00000541122 LINC00483Q53H64 154 aa9.01□□□□□ -0.97
SMARCA4-207ENST00000541122 A0A0A0MQY5 61 aa9□□□□□ -0.97
SMARCA4-207ENST00000541122 A6NN06 94 aa9□□□□□ -0.97
SMARCA4-207ENST00000541122 ROMO1P60602 79 aa9□□□□□ -0.97
SMARCA4-207ENST00000541122 SPATA8Q6RVD6 105 aa8.98□□□□□ -0.97
SMARCA4-207ENST00000541122 USP24Q9UPU5 2620 aa8.98□□□□□ -0.97
SMARCA4-207ENST00000541122 RPL37P61927 97 aaKnown RBP8.97□□□□□ -0.97
SMARCA4-207ENST00000541122 UNC80Q8N2C7 3258 aa8.96□□□□□ -0.97
SMARCA4-207ENST00000541122 J3QL48 77 aa8.95□□□□□ -0.98
SMARCA4-207ENST00000541122 H1FX-AS1Q4G0G2 97 aa8.95□□□□□ -0.98
SMARCA4-207ENST00000541122 S4R3F8 94 aa8.95□□□□□ -0.98
SMARCA4-207ENST00000541122 CAMK2N1Q7Z7J9 78 aa8.93□□□□□ -0.98
SMARCA4-207ENST00000541122 FLNAP21333 2647 aaKnown RBP8.92□□□□□ -0.98
SMARCA4-207ENST00000541122 Q6ZSA8 131 aa8.92□□□□□ -0.98
SMARCA4-207ENST00000541122 TRIOO75962 3097 aa8.92□□□□□ -0.98
SMARCA4-207ENST00000541122 XIRP2A4UGR9 3374 aa8.92□□□□□ -0.98
SMARCA4-207ENST00000541122 SPTBN5Q9NRC6 3674 aaKnown RBP8.89□□□□□ -0.99
SMARCA4-207ENST00000541122 MGAM2Q2M2H8 2515 aa8.87□□□□□ -0.99
SMARCA4-207ENST00000541122 KRTAP1-5Q9BYS1 174 aa8.85□□□□□ -0.99
SMARCA4-207ENST00000541122 REV3LO60673 3130 aa8.84□□□□□ -0.99
SMARCA4-207ENST00000541122 A0A087X002 238 aa8.82□□□□□ -1
SMARCA4-207ENST00000541122 AKAP13Q12802 2813 aa8.81□□□□□ -1
SMARCA4-207ENST00000541122 ITPR3Q14573 2671 aa8.8□□□□□ -1
SMARCA4-207ENST00000541122 ATRQ13535 2644 aa8.8□□□□□ -1
SMARCA4-207ENST00000541122 KRTAP25-1Q3LHN0 102 aa8.78□□□□□ -1
SMARCA4-207ENST00000541122 HECTD1Q9ULT8 2610 aa8.76□□□□□ -1.01
SMARCA4-207ENST00000541122 R4GN34 69 aa8.74□□□□□ -1.01
SMARCA4-207ENST00000541122 EYSQ5T1H1 3165 aa8.74□□□□□ -1.01
SMARCA4-207ENST00000541122 FLNBO75369 2602 aaKnown RBP8.72□□□□□ -1.01
SMARCA4-207ENST00000541122 HELZ2Q9BYK8 2649 aaKnown RBP8.71□□□□□ -1.02
SMARCA4-207ENST00000541122 IGSF10Q6WRI0 2623 aa8.71□□□□□ -1.02
SMARCA4-207ENST00000541122 NOTCH2NLQ7Z3S9 236 aa8.68□□□□□ -1.02
SMARCA4-207ENST00000541122 KRTAP16-1A8MUX0 517 aa8.68□□□□□ -1.02
SMARCA4-207ENST00000541122 VCANP13611 3396 aa8.68□□□□□ -1.02
SMARCA4-207ENST00000541122 PANO1I0J062 215 aa8.66□□□□□ -1.02
SMARCA4-207ENST00000541122 DSPP15924 2871 aaKnown RBP8.63□□□□□ -1.03
SMARCA4-207ENST00000541122 A8MU10 97 aa8.63□□□□□ -1.03
SMARCA4-207ENST00000541122 CFAP54Q96N23 3096 aa8.62□□□□□ -1.03
SMARCA4-207ENST00000541122 MGAQ8IWI9 3026 aa8.62□□□□□ -1.03
SMARCA4-207ENST00000541122 MAST4O15021 2626 aa8.62□□□□□ -1.03
SMARCA4-207ENST00000541122 ADM2Q7Z4H4 148 aa8.62□□□□□ -1.03
SMARCA4-207ENST00000541122 KRTAP7-1Q8IUC3 87 aa8.61□□□□□ -1.03
SMARCA4-207ENST00000541122 UNC79Q9P2D8 2635 aa8.61□□□□□ -1.03
SMARCA4-207ENST00000541122 CHD6Q8TD26 2715 aa8.6□□□□□ -1.03
SMARCA4-207ENST00000541122 GCN1Q92616 2671 aaKnown RBP8.6□□□□□ -1.03
SMARCA4-207ENST00000541122 DNAH14Q0VDD8 3507 aa8.59□□□□□ -1.03
SMARCA4-207ENST00000541122 M0QZ58 72 aa8.59□□□□□ -1.03
SMARCA4-207ENST00000541122 RPS29P62273 56 aaKnown RBP8.59□□□□□ -1.03
SMARCA4-207ENST00000541122 WDFY4Q6ZS81 3184 aa8.57□□□□□ -1.04
SMARCA4-207ENST00000541122 KRTAP10-1P60331 282 aa8.57□□□□□ -1.04
SMARCA4-207ENST00000541122 NBEAL1Q6ZS30 2694 aa8.56□□□□□ -1.04
SMARCA4-207ENST00000541122 KRTAP11-1Q8IUC1 163 aa8.56□□□□□ -1.04
SMARCA4-207ENST00000541122 KRTAP13-1Q8IUC0 172 aa8.55□□□□□ -1.04
SMARCA4-207ENST00000541122 VPS13AQ96RL7 3174 aa8.54□□□□□ -1.04
SMARCA4-207ENST00000541122 BAHCC1Q9P281 2608 aa8.54□□□□□ -1.04
SMARCA4-207ENST00000541122 SEC61BP60468 96 aaKnown RBP8.54□□□□□ -1.04
SMARCA4-207ENST00000541122 LAMA1P25391 3075 aa8.53□□□□□ -1.04
SMARCA4-207ENST00000541122 CFAP46Q8IYW2 2715 aa8.53□□□□□ -1.04
SMARCA4-207ENST00000541122 KRTAP10-2P60368 255 aa8.52□□□□□ -1.05
SMARCA4-207ENST00000541122 DMXL1Q9Y485 3027 aa8.51□□□□□ -1.05
SMARCA4-207ENST00000541122 CENPEQ02224 2701 aa8.47□□□□□ -1.05
SMARCA4-207ENST00000541122 DMBT1Q9UGM3 2413 aaPredicted RBP8.47□□□□□ -1.05
SMARCA4-207ENST00000541122 Q6ZRN7 208 aaPredicted RBP8.44□□□□□ -1.06
SMARCA4-207ENST00000541122 NDUFAF8A1L188 74 aa8.43□□□□□ -1.06
SMARCA4-207ENST00000541122 FRYQ5TBA9 3013 aa8.43□□□□□ -1.06
SMARCA4-207ENST00000541122 DMXL2Q8TDJ6 3036 aa8.41□□□□□ -1.06
SMARCA4-207ENST00000541122 FLG2Q5D862 2391 aaPredicted RBP8.41□□□□□ -1.06
SMARCA4-207ENST00000541122 M0R2T5 61 aa8.41□□□□□ -1.06
SMARCA4-207ENST00000541122 STAB1Q9NY15 2570 aa8.41□□□□□ -1.06
SMARCA4-207ENST00000541122 FRYLO94915 3013 aa8.39□□□□□ -1.07
SMARCA4-207ENST00000541122 KMT2BQ9UMN6 2715 aaPredicted RBP8.38□□□□□ -1.07
SMARCA4-207ENST00000541122 NOTCH1P46531 2555 aa8.38□□□□□ -1.07
SMARCA4-207ENST00000541122 A8MUU9 505 aa8.37□□□□□ -1.07
SMARCA4-207ENST00000541122 Q5VSD8 79 aa8.37□□□□□ -1.07
SMARCA4-207ENST00000541122 KRTAP13-2Q52LG2 175 aa8.36□□□□□ -1.07
SMARCA4-207ENST00000541122 NBEAL2Q6ZNJ1 2754 aa8.36□□□□□ -1.07
SMARCA4-207ENST00000541122 USP34Q70CQ2 3546 aa8.33□□□□□ -1.08
SMARCA4-207ENST00000541122 MUC3AQ02505 3323 aa8.32□□□□□ -1.08
SMARCA4-207ENST00000541122 PLAC4Q8WY50 150 aa8.32□□□□□ -1.08
SMARCA4-207ENST00000541122 TEX15Q9BXT5 2789 aa8.32□□□□□ -1.08
SMARCA4-207ENST00000541122 MYO15AQ9UKN7 3530 aa8.31□□□□□ -1.08
SMARCA4-207ENST00000541122 NBEAQ8NFP9 2946 aa8.29□□□□□ -1.08
SMARCA4-207ENST00000541122 ITPR1Q14643 2758 aa8.28□□□□□ -1.08
SMARCA4-207ENST00000541122 UBR5O95071 2799 aaPredicted RBP8.28□□□□□ -1.08
SMARCA4-207ENST00000541122 FLNCQ14315 2725 aa8.28□□□□□ -1.08
SMARCA4-207ENST00000541122 SETXQ7Z333 2677 aaKnown RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms