RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 CD164Q04900 197 aa9.44□□□□□ -0.9
CD9-209ENST00000540891 MUC2Q02817 5179 aa9.44□□□□□ -0.9
CD9-209ENST00000540891 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.43□□□□□ -0.9
CD9-209ENST00000540891 TMEM238LA0A1B0GVL6 79 aa9.42□□□□□ -0.9
CD9-209ENST00000540891 A6NJY4 79 aa9.42□□□□□ -0.9
CD9-209ENST00000540891 HSD52Q0P140 79 aa9.42□□□□□ -0.9
CD9-209ENST00000540891 PRO1854Q9UHT4 67 aa9.42□□□□□ -0.9
CD9-209ENST00000540891 FAM218AQ96MZ4 157 aa9.41□□□□□ -0.9
CD9-209ENST00000540891 LIMD2Q9BT23 127 aa9.41□□□□□ -0.9
CD9-209ENST00000540891 UQCR10Q9UDW1 63 aa9.4□□□□□ -0.9
CD9-209ENST00000540891 H0YGX0 51 aa9.38□□□□□ -0.91
CD9-209ENST00000540891 Q5XG85 94 aa9.38□□□□□ -0.91
CD9-209ENST00000540891 IGLV8-61A0A075B6I0 122 aa9.37□□□□□ -0.91
CD9-209ENST00000540891 F8WEM9 126 aa9.37□□□□□ -0.91
CD9-209ENST00000540891 K7ERJ3 54 aa9.36□□□□□ -0.91
CD9-209ENST00000540891 PPDPFLQ8WWR9 84 aa9.36□□□□□ -0.91
CD9-209ENST00000540891 TRIAP1O43715 76 aa9.35□□□□□ -0.91
CD9-209ENST00000540891 OCIAD2Q56VL3 154 aa9.34□□□□□ -0.91
CD9-209ENST00000540891 IGFL1Q6UW32 110 aa9.33□□□□□ -0.92
CD9-209ENST00000540891 Q6JHZ5 121 aa9.32□□□□□ -0.92
CD9-209ENST00000540891 A0A1B0GX51 115 aa9.31□□□□□ -0.92
CD9-209ENST00000540891 C1orf195Q5TG92 126 aa9.31□□□□□ -0.92
CD9-209ENST00000540891 CLEC2BQ92478 149 aa9.31□□□□□ -0.92
CD9-209ENST00000540891 SNHG12Q9BXW3 62 aa9.31□□□□□ -0.92
CD9-209ENST00000540891 H3BUT2 72 aa9.29□□□□□ -0.92
CD9-209ENST00000540891 XP32Q5T750 250 aa9.29□□□□□ -0.92
CD9-209ENST00000540891 SNCGO76070 127 aa9.28□□□□□ -0.92
CD9-209ENST00000540891 ASB16-AS1Q495Z4 193 aa9.28□□□□□ -0.92
CD9-209ENST00000540891 TRBV7-7A0A0K0K1E9 115 aa9.27□□□□□ -0.93
CD9-209ENST00000540891 PSMB2P49721 201 aa9.25□□□□□ -0.93
CD9-209ENST00000540891 NDUFV3P56181 108 aaKnown RBP9.25□□□□□ -0.93
CD9-209ENST00000540891 TCL1BO95988 128 aa9.24□□□□□ -0.93
CD9-209ENST00000540891 SMIM6P0DI80 62 aa9.24□□□□□ -0.93
CD9-209ENST00000540891 C9orf92A6NGG3 77 aa9.23□□□□□ -0.93
CD9-209ENST00000540891 FAT4Q6V0I7 4981 aa9.22□□□□□ -0.93
CD9-209ENST00000540891 FABP2P12104 132 aa9.21□□□□□ -0.94
CD9-209ENST00000540891 SEC61BP60468 96 aaKnown RBP9.21□□□□□ -0.94
CD9-209ENST00000540891 KRTAP4-1Q9BYQ7 146 aa9.21□□□□□ -0.94
CD9-209ENST00000540891 GHRHP01286 108 aa9.2□□□□□ -0.94
CD9-209ENST00000540891 COX6CP09669 75 aa9.2□□□□□ -0.94
CD9-209ENST00000540891 H3BMG7 143 aa9.19□□□□□ -0.94
CD9-209ENST00000540891 Q6Q795 121 aa9.19□□□□□ -0.94
CD9-209ENST00000540891 DNAL4O96015 105 aa9.18□□□□□ -0.94
CD9-209ENST00000540891 ORMDL1Q9P0S3 153 aa9.18□□□□□ -0.94
CD9-209ENST00000540891 A0A0U1RQV1 116 aa9.17□□□□□ -0.94
CD9-209ENST00000540891 LOC105371267A0A1B0GV96 52 aa9.17□□□□□ -0.94
CD9-209ENST00000540891 TEN1Q86WV5 123 aa9.15□□□□□ -0.94
CD9-209ENST00000540891 M0R143 59 aa9.14□□□□□ -0.95
CD9-209ENST00000540891 LST1O00453 97 aa9.14□□□□□ -0.95
CD9-209ENST00000540891 A0A1W2PNM2 257 aa9.13□□□□□ -0.95
CD9-209ENST00000540891 TRACP01848 142 aa9.13□□□□□ -0.95
CD9-209ENST00000540891 SCGB1C2P0DMR2 95 aa9.13□□□□□ -0.95
CD9-209ENST00000540891 H3BQ85 93 aa9.12□□□□□ -0.95
CD9-209ENST00000540891 TMEM256-PLSCR3K7ERE1 68 aa9.12□□□□□ -0.95
CD9-209ENST00000540891 A0A087WSZ3 146 aa9.11□□□□□ -0.95
CD9-209ENST00000540891 A0A1B0GV72 72 aa9.1□□□□□ -0.95
CD9-209ENST00000540891 PCOTHQ58A44 107 aa9.1□□□□□ -0.95
CD9-209ENST00000540891 UBE2V1Q13404 147 aa9.09□□□□□ -0.95
CD9-209ENST00000540891 LCE2AQ5TA79 106 aaPredicted RBP9.09□□□□□ -0.95
CD9-209ENST00000540891 NAA38Q9BRA0 125 aaKnown RBP9.09□□□□□ -0.95
CD9-209ENST00000540891 SS18L2Q9UHA2 77 aa9.09□□□□□ -0.95
CD9-209ENST00000540891 TSTD3H0UI37 97 aa9.07□□□□□ -0.96
CD9-209ENST00000540891 RPL37P61927 97 aaKnown RBP9.07□□□□□ -0.96
CD9-209ENST00000540891 ANKRD29Q8N6D5 301 aa9.07□□□□□ -0.96
CD9-209ENST00000540891 Q96NJ1 140 aa9.07□□□□□ -0.96
CD9-209ENST00000540891 TRBV7-4A0A0J9YYF1 115 aa9.04□□□□□ -0.96
CD9-209ENST00000540891 BAALC-AS2P0C853 105 aa9.02□□□□□ -0.97
CD9-209ENST00000540891 OBSCN-AS1Q96MR7 158 aa9.02□□□□□ -0.97
CD9-209ENST00000540891 CCKP06307 115 aa9□□□□□ -0.97
CD9-209ENST00000540891 ATXN8Q156A1 80 aa9□□□□□ -0.97
CD9-209ENST00000540891 BATFQ16520 125 aa9□□□□□ -0.97
CD9-209ENST00000540891 RBM3P98179 157 aaKnown RBP8.98□□□□□ -0.97
CD9-209ENST00000540891 KRTAP19-2Q3LHN2 52 aa8.96□□□□□ -0.98
CD9-209ENST00000540891 Q75L30 129 aa8.95□□□□□ -0.98
CD9-209ENST00000540891 LCE2CQ5TA81 110 aa8.94□□□□□ -0.98
CD9-209ENST00000540891 DSCR8Q96T75 97 aa8.94□□□□□ -0.98
CD9-209ENST00000540891 LINC00472Q9H8W2 130 aa8.94□□□□□ -0.98
CD9-209ENST00000540891 VPS25Q9BRG1 176 aa8.93□□□□□ -0.98
CD9-209ENST00000540891 IGKV4-1P06312 121 aa8.92□□□□□ -0.98
CD9-209ENST00000540891 SIGMAR1Q99720 223 aa8.92□□□□□ -0.98
CD9-209ENST00000540891 TAX1BP3O14907 124 aa8.91□□□□□ -0.98
CD9-209ENST00000540891 DSCR10P59022 87 aa8.91□□□□□ -0.98
CD9-209ENST00000540891 DEFB116Q30KQ4 102 aa8.91□□□□□ -0.98
CD9-209ENST00000540891 LYRM7Q5U5X0 104 aa8.91□□□□□ -0.98
CD9-209ENST00000540891 TRBV20-1A0A075B6N2 111 aa8.9□□□□□ -0.98
CD9-209ENST00000540891 C9orf118A6NHY6 69 aa8.9□□□□□ -0.98
CD9-209ENST00000540891 C9JAW5 83 aa8.9□□□□□ -0.98
CD9-209ENST00000540891 C20orf166-AS1Q96NR2 134 aa8.9□□□□□ -0.98
CD9-209ENST00000540891 A8MUU9 505 aa8.88□□□□□ -0.99
CD9-209ENST00000540891 JMJD7-PLA2G4BH0Y9G9 81 aa8.88□□□□□ -0.99
CD9-209ENST00000540891 Q6ZQT0 140 aa8.87□□□□□ -0.99
CD9-209ENST00000540891 LOC110117498A0A087WWA1 95 aa8.86□□□□□ -0.99
CD9-209ENST00000540891 ATP11AUNQ6ZP68 121 aa8.86□□□□□ -0.99
CD9-209ENST00000540891 NOTCH2NLQ7Z3S9 236 aa8.86□□□□□ -0.99
CD9-209ENST00000540891 A0A1W2PPM0 123 aa8.85□□□□□ -0.99
CD9-209ENST00000540891 KRTAP16-1A8MUX0 517 aa8.85□□□□□ -0.99
CD9-209ENST00000540891 LINC00313P59037 77 aa8.84□□□□□ -0.99
CD9-209ENST00000540891 C14orf132Q9NPU4 83 aa8.83□□□□□ -1
CD9-209ENST00000540891 C21orf62-AS1Q17RA5 79 aa8.81□□□□□ -1
CD9-209ENST00000540891 MT1HP80294 61 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms