RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 HINT1P49773 126 aaPredicted RBP5.06□□□□□ -1.6
TRAPPC1-202ENST00000540486 ELOF1P60002 83 aaKnown RBP5.06□□□□□ -1.6
TRAPPC1-202ENST00000540486 SLC25A34Q6PIV7 304 aa5.06□□□□□ -1.6
TRAPPC1-202ENST00000540486 SMIM11BQ8TCY0 68 aa5.06□□□□□ -1.6
TRAPPC1-202ENST00000540486 HIST1H4GQ99525 98 aa5.06□□□□□ -1.6
TRAPPC1-202ENST00000540486 RETNLBQ9BQ08 111 aa5.06□□□□□ -1.6
TRAPPC1-202ENST00000540486 HIGD1BQ9P298 99 aa5.06□□□□□ -1.6
TRAPPC1-202ENST00000540486 ZNF706Q9Y5V0 76 aaPredicted RBP5.06□□□□□ -1.6
TRAPPC1-202ENST00000540486 COX7BP24311 80 aa5.05□□□□□ -1.6
TRAPPC1-202ENST00000540486 KRTAP4-1Q9BYQ7 146 aa5.05□□□□□ -1.6
TRAPPC1-202ENST00000540486 TRBV7-6A0A0J9YX20 115 aa5.04□□□□□ -1.6
TRAPPC1-202ENST00000540486 CFC1P0CG37 223 aa5.03□□□□□ -1.6
TRAPPC1-202ENST00000540486 KRTAP10-6P60371 365 aaPredicted RBP5.03□□□□□ -1.6
TRAPPC1-202ENST00000540486 MT1HP80294 61 aa5.03□□□□□ -1.6
TRAPPC1-202ENST00000540486 C12orf57Q99622 126 aa5.03□□□□□ -1.6
TRAPPC1-202ENST00000540486 DHRS4-AS1Q9P1J3 65 aa5.03□□□□□ -1.6
TRAPPC1-202ENST00000540486 A0A1B0GWB2 263 aa5.02□□□□□ -1.61
TRAPPC1-202ENST00000540486 SPRR1BP22528 89 aa5.02□□□□□ -1.61
TRAPPC1-202ENST00000540486 SEC61BP60468 96 aaKnown RBP5.02□□□□□ -1.61
TRAPPC1-202ENST00000540486 LINC00304Q8N9R0 145 aa5.02□□□□□ -1.61
TRAPPC1-202ENST00000540486 TAL2Q16559 108 aa5.01□□□□□ -1.61
TRAPPC1-202ENST00000540486 CEND1Q8N111 149 aa5.01□□□□□ -1.61
TRAPPC1-202ENST00000540486 IGLV9-49A0A0B4J1Y8 123 aa5□□□□□ -1.61
TRAPPC1-202ENST00000540486 MOBPQ13875 183 aa5□□□□□ -1.61
TRAPPC1-202ENST00000540486 SSBP3-AS1Q7Z2R9 100 aa5□□□□□ -1.61
TRAPPC1-202ENST00000540486 Q8NBF4 154 aa5□□□□□ -1.61
TRAPPC1-202ENST00000540486 FXYD2P54710 66 aa4.99□□□□□ -1.61
TRAPPC1-202ENST00000540486 LINC00575Q6W349 94 aa4.99□□□□□ -1.61
TRAPPC1-202ENST00000540486 SMIM29Q86T20 159 aa4.99□□□□□ -1.61
TRAPPC1-202ENST00000540486 DEFB105AQ8NG35 78 aa4.99□□□□□ -1.61
TRAPPC1-202ENST00000540486 IGLV5-48A0A075B6I7 105 aa4.98□□□□□ -1.61
TRAPPC1-202ENST00000540486 A0A0B4J2C4 111 aa4.98□□□□□ -1.61
TRAPPC1-202ENST00000540486 VAMP3Q15836 100 aa4.98□□□□□ -1.61
TRAPPC1-202ENST00000540486 SPAG11AQ6PDA7 123 aa4.98□□□□□ -1.61
TRAPPC1-202ENST00000540486 TEX49A0A1B0GTD5 131 aa4.97□□□□□ -1.61
TRAPPC1-202ENST00000540486 Q8N377 158 aa4.97□□□□□ -1.61
TRAPPC1-202ENST00000540486 UQCR10Q9UDW1 63 aa4.97□□□□□ -1.61
TRAPPC1-202ENST00000540486 H7C2G1 150 aa4.96□□□□□ -1.62
TRAPPC1-202ENST00000540486 KRTAP19-2Q3LHN2 52 aa4.96□□□□□ -1.62
TRAPPC1-202ENST00000540486 RAB37Q96AX2 223 aa4.96□□□□□ -1.62
TRAPPC1-202ENST00000540486 PRO1854Q9UHT4 67 aa4.96□□□□□ -1.62
TRAPPC1-202ENST00000540486 hADV29S1A0JD25 119 aa4.95□□□□□ -1.62
TRAPPC1-202ENST00000540486 SPINK1P00995 79 aa4.95□□□□□ -1.62
TRAPPC1-202ENST00000540486 HSD52Q0P140 79 aa4.95□□□□□ -1.62
TRAPPC1-202ENST00000540486 Q1RN00 199 aa4.95□□□□□ -1.62
TRAPPC1-202ENST00000540486 BVES-AS1Q5T3Y7 98 aa4.95□□□□□ -1.62
TRAPPC1-202ENST00000540486 C9orf153Q5TBE3 101 aa4.95□□□□□ -1.62
TRAPPC1-202ENST00000540486 FP248Q71RG6 208 aaPredicted RBP4.95□□□□□ -1.62
TRAPPC1-202ENST00000540486 PRO1933Q9H354 126 aa4.95□□□□□ -1.62
TRAPPC1-202ENST00000540486 NHP2Q9NX24 153 aaKnown RBP4.95□□□□□ -1.62
TRAPPC1-202ENST00000540486 LAMTOR3Q9UHA4 124 aa4.95□□□□□ -1.62
TRAPPC1-202ENST00000540486 SLC25A20O43772 301 aa4.94□□□□□ -1.62
TRAPPC1-202ENST00000540486 PCP4P48539 62 aa4.94□□□□□ -1.62
TRAPPC1-202ENST00000540486 KRTAP13-3Q3SY46 172 aa4.94□□□□□ -1.62
TRAPPC1-202ENST00000540486 FAM218AQ96MZ4 157 aa4.94□□□□□ -1.62
TRAPPC1-202ENST00000540486 A0A0G2JQZ4 141 aa4.93□□□□□ -1.62
TRAPPC1-202ENST00000540486 Q6ZQY7 126 aa4.93□□□□□ -1.62
TRAPPC1-202ENST00000540486 H0YGX0 51 aa4.92□□□□□ -1.62
TRAPPC1-202ENST00000540486 K7ERJ3 54 aa4.92□□□□□ -1.62
TRAPPC1-202ENST00000540486 RPS29P62273 56 aaKnown RBP4.92□□□□□ -1.62
TRAPPC1-202ENST00000540486 FCGBPQ9Y6R7 5405 aaPredicted RBP4.91□□□□□ -1.62
TRAPPC1-202ENST00000540486 M0R2T5 61 aa4.91□□□□□ -1.62
TRAPPC1-202ENST00000540486 SMIM6P0DI80 62 aa4.91□□□□□ -1.62
TRAPPC1-202ENST00000540486 HRCT1Q6UXD1 115 aa4.91□□□□□ -1.62
TRAPPC1-202ENST00000540486 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.91□□□□□ -1.62
TRAPPC1-202ENST00000540486 SSPOA2VEC9 5147 aa4.91□□□□□ -1.62
TRAPPC1-202ENST00000540486 CD164Q04900 197 aa4.88□□□□□ -1.63
TRAPPC1-202ENST00000540486 CLEC2BQ92478 149 aa4.88□□□□□ -1.63
TRAPPC1-202ENST00000540486 USH2AO75445 5202 aa4.88□□□□□ -1.63
TRAPPC1-202ENST00000540486 SYNE2Q8WXH0 6885 aaKnown RBP4.88□□□□□ -1.63
TRAPPC1-202ENST00000540486 IGLV8-61A0A075B6I0 122 aa4.87□□□□□ -1.63
TRAPPC1-202ENST00000540486 A0A1B0GX51 115 aa4.87□□□□□ -1.63
TRAPPC1-202ENST00000540486 OCIAD2Q56VL3 154 aa4.87□□□□□ -1.63
TRAPPC1-202ENST00000540486 PSMB2P49721 201 aa4.86□□□□□ -1.63
TRAPPC1-202ENST00000540486 PPDPFLQ8WWR9 84 aa4.86□□□□□ -1.63
TRAPPC1-202ENST00000540486 SNHG12Q9BXW3 62 aa4.86□□□□□ -1.63
TRAPPC1-202ENST00000540486 Q5XG85 94 aa4.85□□□□□ -1.63
TRAPPC1-202ENST00000540486 IGFL1Q6UW32 110 aa4.85□□□□□ -1.63
TRAPPC1-202ENST00000540486 MACF1Q9UPN3 7388 aaKnown RBP4.85□□□□□ -1.63
TRAPPC1-202ENST00000540486 F8WEM9 126 aa4.84□□□□□ -1.63
TRAPPC1-202ENST00000540486 SNCGO76070 127 aa4.84□□□□□ -1.63
TRAPPC1-202ENST00000540486 NDUFV3P56181 108 aaKnown RBP4.84□□□□□ -1.63
TRAPPC1-202ENST00000540486 H3BUT2 72 aa4.83□□□□□ -1.64
TRAPPC1-202ENST00000540486 COX6CP09669 75 aa4.83□□□□□ -1.64
TRAPPC1-202ENST00000540486 Q6JHZ5 121 aa4.83□□□□□ -1.64
TRAPPC1-202ENST00000540486 A0A1B0GV90 55 aa4.82□□□□□ -1.64
TRAPPC1-202ENST00000540486 TSTD3H0UI37 97 aa4.82□□□□□ -1.64
TRAPPC1-202ENST00000540486 M0R143 59 aa4.82□□□□□ -1.64
TRAPPC1-202ENST00000540486 C1orf195Q5TG92 126 aa4.82□□□□□ -1.64
TRAPPC1-202ENST00000540486 LIMD2Q9BT23 127 aa4.82□□□□□ -1.64
TRAPPC1-202ENST00000540486 SCGB1C2P0DMR2 95 aa4.81□□□□□ -1.64
TRAPPC1-202ENST00000540486 FABP2P12104 132 aa4.81□□□□□ -1.64
TRAPPC1-202ENST00000540486 NAA38Q9BRA0 125 aaKnown RBP4.81□□□□□ -1.64
TRAPPC1-202ENST00000540486 TRBV7-7A0A0K0K1E9 115 aa4.8□□□□□ -1.64
TRAPPC1-202ENST00000540486 H3BMG7 143 aa4.8□□□□□ -1.64
TRAPPC1-202ENST00000540486 FLGP20930 4061 aaPredicted RBP4.8□□□□□ -1.64
TRAPPC1-202ENST00000540486 LST1O00453 97 aa4.79□□□□□ -1.64
TRAPPC1-202ENST00000540486 TRACP01848 142 aa4.79□□□□□ -1.64
TRAPPC1-202ENST00000540486 ORMDL1Q9P0S3 153 aa4.79□□□□□ -1.64
TRAPPC1-202ENST00000540486 TMEM256-PLSCR3K7ERE1 68 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms