RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 TACC2O95359 2948 aa8.14□□□□□ -1.11
DNMT1-203ENST00000540357 C1orf134Q5TEV5 83 aa8.13□□□□□ -1.11
DNMT1-203ENST00000540357 SPRR1BP22528 89 aa8.13□□□□□ -1.11
DNMT1-203ENST00000540357 LINC00472Q9H8W2 130 aa8.13□□□□□ -1.11
DNMT1-203ENST00000540357 HELZ2Q9BYK8 2649 aaKnown RBP8.12□□□□□ -1.11
DNMT1-203ENST00000540357 CHD6Q8TD26 2715 aa8.11□□□□□ -1.11
DNMT1-203ENST00000540357 TNRC18O15417 2968 aaPredicted RBP8.11□□□□□ -1.11
DNMT1-203ENST00000540357 ZNF861PO60384 105 aa8.1□□□□□ -1.11
DNMT1-203ENST00000540357 RBM12B-AS1Q9P1G2 102 aa8.1□□□□□ -1.11
DNMT1-203ENST00000540357 LY6G6CO95867 125 aa8.1□□□□□ -1.11
DNMT1-203ENST00000540357 F8P00451 2351 aa8.09□□□□□ -1.11
DNMT1-203ENST00000540357 MIR22HGQ0VDD5 57 aa8.09□□□□□ -1.11
DNMT1-203ENST00000540357 K7EIL1 84 aa8.07□□□□□ -1.12
DNMT1-203ENST00000540357 BAHCC1Q9P281 2608 aa8.07□□□□□ -1.12
DNMT1-203ENST00000540357 KRTAP29-1A8MX34 341 aaPredicted RBP8.07□□□□□ -1.12
DNMT1-203ENST00000540357 SSBP3-AS1Q7Z2R9 100 aa8.07□□□□□ -1.12
DNMT1-203ENST00000540357 WDFY3Q8IZQ1 3526 aa8.07□□□□□ -1.12
DNMT1-203ENST00000540357 ITPR3Q14573 2671 aa8.06□□□□□ -1.12
DNMT1-203ENST00000540357 SPACA4Q8TDM5 124 aa8.04□□□□□ -1.12
DNMT1-203ENST00000540357 LOC400499M0QZD8 3231 aa8.03□□□□□ -1.12
DNMT1-203ENST00000540357 PRR26Q8N8Z3 221 aa8.03□□□□□ -1.12
DNMT1-203ENST00000540357 APLNQ9ULZ1 77 aa8.03□□□□□ -1.12
DNMT1-203ENST00000540357 USP24Q9UPU5 2620 aa8.03□□□□□ -1.12
DNMT1-203ENST00000540357 HRES1P13985 223 aa8.02□□□□□ -1.13
DNMT1-203ENST00000540357 PSORS1C2Q9UIG4 136 aa8.02□□□□□ -1.13
DNMT1-203ENST00000540357 CENPEQ02224 2701 aa8.01□□□□□ -1.13
DNMT1-203ENST00000540357 HRNRQ86YZ3 2850 aaPredicted RBP8.01□□□□□ -1.13
DNMT1-203ENST00000540357 GCN1Q92616 2671 aaKnown RBP8.01□□□□□ -1.13
DNMT1-203ENST00000540357 ANAPC11Q9NYG5 84 aa7.99□□□□□ -1.13
DNMT1-203ENST00000540357 A0A087WTM6 91 aa7.99□□□□□ -1.13
DNMT1-203ENST00000540357 ATMQ13315 3056 aa7.99□□□□□ -1.13
DNMT1-203ENST00000540357 MAP1AP78559 2803 aaPredicted RBP7.98□□□□□ -1.13
DNMT1-203ENST00000540357 IGLV7-43P04211 117 aa7.96□□□□□ -1.14
DNMT1-203ENST00000540357 Q6ZR54 194 aa7.96□□□□□ -1.14
DNMT1-203ENST00000540357 SPINK7P58062 85 aa7.95□□□□□ -1.14
DNMT1-203ENST00000540357 Q96NJ1 140 aa7.95□□□□□ -1.14
DNMT1-203ENST00000540357 TEX15Q9BXT5 2789 aa7.95□□□□□ -1.14
DNMT1-203ENST00000540357 DMXL2Q8TDJ6 3036 aa7.94□□□□□ -1.14
DNMT1-203ENST00000540357 SETXQ7Z333 2677 aaKnown RBP7.94□□□□□ -1.14
DNMT1-203ENST00000540357 CFAP46Q8IYW2 2715 aa7.94□□□□□ -1.14
DNMT1-203ENST00000540357 KRTAP7-1Q8IUC3 87 aa7.91□□□□□ -1.14
DNMT1-203ENST00000540357 TYMSOSQ8TAI1 123 aa7.91□□□□□ -1.14
DNMT1-203ENST00000540357 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.9□□□□□ -1.14
DNMT1-203ENST00000540357 NBEAL2Q6ZNJ1 2754 aa7.9□□□□□ -1.14
DNMT1-203ENST00000540357 ATRQ13535 2644 aa7.89□□□□□ -1.15
DNMT1-203ENST00000540357 LINC00483Q53H64 154 aa7.87□□□□□ -1.15
DNMT1-203ENST00000540357 KRTAP1-5Q9BYS1 174 aa7.87□□□□□ -1.15
DNMT1-203ENST00000540357 IGSF10Q6WRI0 2623 aa7.86□□□□□ -1.15
DNMT1-203ENST00000540357 TEP1Q99973 2627 aaKnown RBP7.85□□□□□ -1.15
DNMT1-203ENST00000540357 A6NN06 94 aa7.84□□□□□ -1.15
DNMT1-203ENST00000540357 LINC01554Q52M75 96 aa7.84□□□□□ -1.15
DNMT1-203ENST00000540357 ZFHX4Q86UP3 3567 aa7.84□□□□□ -1.15
DNMT1-203ENST00000540357 ITPR1Q14643 2758 aa7.84□□□□□ -1.15
DNMT1-203ENST00000540357 UNC79Q9P2D8 2635 aa7.84□□□□□ -1.15
DNMT1-203ENST00000540357 DMXL1Q9Y485 3027 aa7.84□□□□□ -1.15
DNMT1-203ENST00000540357 WWC2-AS2Q96NR7 200 aa7.84□□□□□ -1.15
DNMT1-203ENST00000540357 Q5W150 140 aa7.83□□□□□ -1.16
DNMT1-203ENST00000540357 PLAC8Q9NZF1 115 aa7.83□□□□□ -1.16
DNMT1-203ENST00000540357 CFAP47Q6ZTR5 3102 aa7.82□□□□□ -1.16
DNMT1-203ENST00000540357 PLA2G1BP04054 148 aaKnown RBP7.82□□□□□ -1.16
DNMT1-203ENST00000540357 DMAC1Q96GE9 116 aa7.81□□□□□ -1.16
DNMT1-203ENST00000540357 PRAC1Q96KF2 57 aa7.81□□□□□ -1.16
DNMT1-203ENST00000540357 ASB16-AS1Q495Z4 193 aa7.81□□□□□ -1.16
DNMT1-203ENST00000540357 MAST4O15021 2626 aa7.79□□□□□ -1.16
DNMT1-203ENST00000540357 COL12A1Q99715 3063 aa7.79□□□□□ -1.16
DNMT1-203ENST00000540357 FLNCQ14315 2725 aa7.78□□□□□ -1.16
DNMT1-203ENST00000540357 DMDP11532 3685 aa7.77□□□□□ -1.17
DNMT1-203ENST00000540357 A8MU10 97 aa7.76□□□□□ -1.17
DNMT1-203ENST00000540357 SMG1Q96Q15 3661 aaKnown RBP7.75□□□□□ -1.17
DNMT1-203ENST00000540357 KRTAP11-1Q8IUC1 163 aa7.75□□□□□ -1.17
DNMT1-203ENST00000540357 Q8N1X5 172 aa7.75□□□□□ -1.17
DNMT1-203ENST00000540357 DCHS1Q96JQ0 3298 aa7.74□□□□□ -1.17
DNMT1-203ENST00000540357 UTP20O75691 2785 aaKnown RBP7.74□□□□□ -1.17
DNMT1-203ENST00000540357 LINC00304Q8N9R0 145 aa7.74□□□□□ -1.17
DNMT1-203ENST00000540357 MGAM2Q2M2H8 2515 aa7.71□□□□□ -1.17
DNMT1-203ENST00000540357 PANO1I0J062 215 aa7.7□□□□□ -1.18
DNMT1-203ENST00000540357 KRTAP13-1Q8IUC0 172 aa7.69□□□□□ -1.18
DNMT1-203ENST00000540357 SPATA8Q6RVD6 105 aa7.69□□□□□ -1.18
DNMT1-203ENST00000540357 CSMD1Q96PZ7 3565 aa7.68□□□□□ -1.18
DNMT1-203ENST00000540357 ZANQ9Y493 2812 aa7.68□□□□□ -1.18
DNMT1-203ENST00000540357 A0A087X002 238 aa7.68□□□□□ -1.18
DNMT1-203ENST00000540357 NOTCH2NLQ7Z3S9 236 aa7.68□□□□□ -1.18
DNMT1-203ENST00000540357 DCHS2Q6V1P9 2916 aa7.68□□□□□ -1.18
DNMT1-203ENST00000540357 SPINT4Q6UDR6 99 aa7.67□□□□□ -1.18
DNMT1-203ENST00000540357 CSAG1Q6PB30 78 aa7.67□□□□□ -1.18
DNMT1-203ENST00000540357 A0A1B0GU33 70 aa7.66□□□□□ -1.18
DNMT1-203ENST00000540357 ASPMQ8IZT6 3477 aa7.65□□□□□ -1.18
DNMT1-203ENST00000540357 C9orf92A6NGG3 77 aa7.63□□□□□ -1.19
DNMT1-203ENST00000540357 MUC3AQ02505 3323 aa7.6□□□□□ -1.19
DNMT1-203ENST00000540357 LAMA5O15230 3695 aa7.6□□□□□ -1.19
DNMT1-203ENST00000540357 RELNP78509 3460 aa7.59□□□□□ -1.19
DNMT1-203ENST00000540357 J3QL48 77 aa7.59□□□□□ -1.2
DNMT1-203ENST00000540357 SPENQ96T58 3664 aaKnown RBP7.58□□□□□ -1.2
DNMT1-203ENST00000540357 H3BS24 57 aa7.58□□□□□ -1.2
DNMT1-203ENST00000540357 ASH1LQ9NR48 2969 aaKnown RBP7.58□□□□□ -1.2
DNMT1-203ENST00000540357 Q6ZRN7 208 aaPredicted RBP7.56□□□□□ -1.2
DNMT1-203ENST00000540357 CRIPTQ9P021 101 aa7.56□□□□□ -1.2
DNMT1-203ENST00000540357 STAB1Q9NY15 2570 aa7.55□□□□□ -1.2
DNMT1-203ENST00000540357 APCP25054 2843 aa7.55□□□□□ -1.2
DNMT1-203ENST00000540357 MXRA5Q9NR99 2828 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms