RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 IGLV5-37A0A075B6J1 123 aa8.81□□□□□ -1
SCNN1A-215ENST00000540037 SEC61GP60059 68 aa8.81□□□□□ -1
SCNN1A-215ENST00000540037 C4orf48Q5BLP8 95 aa8.81□□□□□ -1
SCNN1A-215ENST00000540037 COL6A5A8TX70 2615 aa8.81□□□□□ -1
SCNN1A-215ENST00000540037 C1orf195Q5TG92 126 aa8.81□□□□□ -1
SCNN1A-215ENST00000540037 J3QKU1 62 aa8.8□□□□□ -1
SCNN1A-215ENST00000540037 REG3GQ6UW15 175 aa8.8□□□□□ -1
SCNN1A-215ENST00000540037 A0A087WSZ3 146 aa8.8□□□□□ -1
SCNN1A-215ENST00000540037 IGKV2-24A0A0C4DH68 120 aa8.78□□□□□ -1
SCNN1A-215ENST00000540037 CMYA5Q8N3K9 4069 aa8.78□□□□□ -1
SCNN1A-215ENST00000540037 V9GYY9 64 aa8.77□□□□□ -1.01
SCNN1A-215ENST00000540037 NBEAL1Q6ZS30 2694 aa8.77□□□□□ -1.01
SCNN1A-215ENST00000540037 TRAV22A0A0B4J277 110 aa8.76□□□□□ -1.01
SCNN1A-215ENST00000540037 Q1T7F1 81 aa8.76□□□□□ -1.01
SCNN1A-215ENST00000540037 LINC00208Q96KT6 92 aa8.75□□□□□ -1.01
SCNN1A-215ENST00000540037 COL7A1Q02388 2944 aa8.75□□□□□ -1.01
SCNN1A-215ENST00000540037 A8MU10 97 aa8.75□□□□□ -1.01
SCNN1A-215ENST00000540037 A0A096LNI7 61 aa8.73□□□□□ -1.01
SCNN1A-215ENST00000540037 A8MUN3 132 aa8.72□□□□□ -1.01
SCNN1A-215ENST00000540037 KRTAP11-1Q8IUC1 163 aa8.72□□□□□ -1.01
SCNN1A-215ENST00000540037 CYP4F30PQ9H0H9 118 aa8.72□□□□□ -1.01
SCNN1A-215ENST00000540037 MP68P56378 58 aa8.69□□□□□ -1.02
SCNN1A-215ENST00000540037 KRTAP29-1A8MX34 341 aaPredicted RBP8.69□□□□□ -1.02
SCNN1A-215ENST00000540037 DNAH9Q9NYC9 4486 aa8.68□□□□□ -1.02
SCNN1A-215ENST00000540037 UBE2AP49459 152 aa8.68□□□□□ -1.02
SCNN1A-215ENST00000540037 CHTF8P0CG12 524 aa8.67□□□□□ -1.02
SCNN1A-215ENST00000540037 CNBPP62633 177 aaKnown RBP8.67□□□□□ -1.02
SCNN1A-215ENST00000540037 PRR15Q8IV56 129 aa8.67□□□□□ -1.02
SCNN1A-215ENST00000540037 TENM2Q9NT68 2774 aa8.67□□□□□ -1.02
SCNN1A-215ENST00000540037 H0Y9P7 68 aa8.67□□□□□ -1.02
SCNN1A-215ENST00000540037 B9D2Q9BPU9 175 aa8.67□□□□□ -1.02
SCNN1A-215ENST00000540037 CASC2Q6XLA1 102 aa8.67□□□□□ -1.02
SCNN1A-215ENST00000540037 KRTAP1-5Q9BYS1 174 aa8.67□□□□□ -1.02
SCNN1A-215ENST00000540037 PHF5AQ7RTV0 110 aaKnown RBP8.65□□□□□ -1.02
SCNN1A-215ENST00000540037 NDUFB1O75438 58 aa8.65□□□□□ -1.02
SCNN1A-215ENST00000540037 IGLV8-61A0A075B6I0 122 aa8.64□□□□□ -1.03
SCNN1A-215ENST00000540037 DNAH3Q8TD57 4116 aa8.64□□□□□ -1.03
SCNN1A-215ENST00000540037 HUWE1Q7Z6Z7 4374 aaKnown RBP8.63□□□□□ -1.03
SCNN1A-215ENST00000540037 Q5VV11 94 aa8.62□□□□□ -1.03
SCNN1A-215ENST00000540037 C16orf90A8MZG2 172 aa8.62□□□□□ -1.03
SCNN1A-215ENST00000540037 STAB2Q8WWQ8 2551 aa8.61□□□□□ -1.03
SCNN1A-215ENST00000540037 LINC00472Q9H8W2 130 aa8.6□□□□□ -1.03
SCNN1A-215ENST00000540037 H0Y9J4 135 aa8.59□□□□□ -1.03
SCNN1A-215ENST00000540037 KRTAP24-1Q3LI83 254 aa8.59□□□□□ -1.03
SCNN1A-215ENST00000540037 DNAH7Q8WXX0 4024 aa8.59□□□□□ -1.03
SCNN1A-215ENST00000540037 A8MWP4 228 aa8.59□□□□□ -1.04
SCNN1A-215ENST00000540037 Q8N9P0 234 aaPredicted RBP8.59□□□□□ -1.04
SCNN1A-215ENST00000540037 PMAIP1Q13794 54 aa8.58□□□□□ -1.04
SCNN1A-215ENST00000540037 CHKB-CPT1BH3BT56 60 aa8.56□□□□□ -1.04
SCNN1A-215ENST00000540037 C9orf163Q8N9P6 203 aa8.56□□□□□ -1.04
SCNN1A-215ENST00000540037 PRR15LQ9BU68 103 aa8.56□□□□□ -1.04
SCNN1A-215ENST00000540037 PCOTHQ58A44 107 aa8.55□□□□□ -1.04
SCNN1A-215ENST00000540037 SPANXA2-OT1Q8N9U9 137 aa8.55□□□□□ -1.04
SCNN1A-215ENST00000540037 MMP24-AS1A0A0U1RRL7 71 aa8.54□□□□□ -1.04
SCNN1A-215ENST00000540037 PANO1I0J062 215 aa8.53□□□□□ -1.04
SCNN1A-215ENST00000540037 MGAM2Q2M2H8 2515 aa8.52□□□□□ -1.05
SCNN1A-215ENST00000540037 COA5Q86WW8 74 aa8.51□□□□□ -1.05
SCNN1A-215ENST00000540037 SPRR1BP22528 89 aa8.51□□□□□ -1.05
SCNN1A-215ENST00000540037 IGLV9-49A0A0B4J1Y8 123 aa8.5□□□□□ -1.05
SCNN1A-215ENST00000540037 H3BPC8 53 aa8.49□□□□□ -1.05
SCNN1A-215ENST00000540037 CD164Q04900 197 aa8.48□□□□□ -1.05
SCNN1A-215ENST00000540037 SPTSSBQ8NFR3 76 aa8.48□□□□□ -1.05
SCNN1A-215ENST00000540037 K7EIL1 84 aa8.47□□□□□ -1.05
SCNN1A-215ENST00000540037 LCA10Q71F78 164 aa8.47□□□□□ -1.05
SCNN1A-215ENST00000540037 LIMD2Q9BT23 127 aa8.47□□□□□ -1.05
SCNN1A-215ENST00000540037 Q96NJ1 140 aa8.47□□□□□ -1.05
SCNN1A-215ENST00000540037 IGLV7-46A0A075B6I9 117 aa8.45□□□□□ -1.06
SCNN1A-215ENST00000540037 UBE2DNLQ8IWF7 75 aa8.44□□□□□ -1.06
SCNN1A-215ENST00000540037 FRAS1Q86XX4 4008 aa8.44□□□□□ -1.06
SCNN1A-215ENST00000540037 SPAG11AQ6PDA7 123 aa8.43□□□□□ -1.06
SCNN1A-215ENST00000540037 A6NED7 52 aa8.43□□□□□ -1.06
SCNN1A-215ENST00000540037 NDUFS5O43920 106 aa8.43□□□□□ -1.06
SCNN1A-215ENST00000540037 IGHV6-1A0A0B4J1U7 121 aa8.42□□□□□ -1.06
SCNN1A-215ENST00000540037 MOBPQ13875 183 aa8.42□□□□□ -1.06
SCNN1A-215ENST00000540037 ANAPC11Q9NYG5 84 aa8.42□□□□□ -1.06
SCNN1A-215ENST00000540037 KRTAP13-1Q8IUC0 172 aa8.41□□□□□ -1.06
SCNN1A-215ENST00000540037 A0A087X002 238 aa8.41□□□□□ -1.06
SCNN1A-215ENST00000540037 NOTCH2NLQ7Z3S9 236 aa8.41□□□□□ -1.06
SCNN1A-215ENST00000540037 Q75L30 129 aa8.4□□□□□ -1.07
SCNN1A-215ENST00000540037 C8orf17Q9NRJ1 99 aa8.4□□□□□ -1.07
SCNN1A-215ENST00000540037 ASB16-AS1Q495Z4 193 aa8.38□□□□□ -1.07
SCNN1A-215ENST00000540037 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.38□□□□□ -1.07
SCNN1A-215ENST00000540037 PLECQ15149 4684 aaKnown RBP8.38□□□□□ -1.07
SCNN1A-215ENST00000540037 LOC101927531A0A1B0GV80 90 aa8.37□□□□□ -1.07
SCNN1A-215ENST00000540037 APLNQ9ULZ1 77 aa8.36□□□□□ -1.07
SCNN1A-215ENST00000540037 HRES1P13985 223 aa8.35□□□□□ -1.07
SCNN1A-215ENST00000540037 C14orf177Q52M58 125 aa8.35□□□□□ -1.07
SCNN1A-215ENST00000540037 Q6ZR54 194 aa8.35□□□□□ -1.07
SCNN1A-215ENST00000540037 TP53AIP1Q9HCN2 124 aa8.33□□□□□ -1.08
SCNN1A-215ENST00000540037 A0A1B0GVX0 72 aa8.33□□□□□ -1.08
SCNN1A-215ENST00000540037 SPINK7P58062 85 aa8.32□□□□□ -1.08
SCNN1A-215ENST00000540037 DNAH8Q96JB1 4490 aa8.31□□□□□ -1.08
SCNN1A-215ENST00000540037 ATP11AUNQ6ZP68 121 aa8.31□□□□□ -1.08
SCNN1A-215ENST00000540037 KTN1-AS1Q86SY8 53 aa8.3□□□□□ -1.08
SCNN1A-215ENST00000540037 LINC01558Q9Y6Z2 57 aa8.3□□□□□ -1.08
SCNN1A-215ENST00000540037 WWC2-AS2Q96NR7 200 aa8.29□□□□□ -1.08
SCNN1A-215ENST00000540037 MRPL34Q9BQ48 92 aaKnown RBP8.29□□□□□ -1.08
SCNN1A-215ENST00000540037 SPINK6Q6UWN8 80 aa8.29□□□□□ -1.08
SCNN1A-215ENST00000540037 PLAC8Q9NZF1 115 aa8.29□□□□□ -1.08
SCNN1A-215ENST00000540037 A6NN06 94 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms