RNA–Protein interactions for RNA: ENST00000539662.1

HMGA2-209, Transcript of high mobility group AT-hook 2, humanhuman

TSL 3

Gene HMGA2, Length 485 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-209ENST00000539662 FXYD2P54710 66 aa6.02□□□□□ -1.45
HMGA2-209ENST00000539662 CEND1Q8N111 149 aa6.02□□□□□ -1.45
HMGA2-209ENST00000539662 VAMP3Q15836 100 aa6□□□□□ -1.45
HMGA2-209ENST00000539662 TPRXLQ17RH7 258 aa6□□□□□ -1.45
HMGA2-209ENST00000539662 Q6ZQY7 126 aa6□□□□□ -1.45
HMGA2-209ENST00000539662 A0A0B4J2C4 111 aa5.99□□□□□ -1.45
HMGA2-209ENST00000539662 hADV29S1A0JD25 119 aa5.99□□□□□ -1.45
HMGA2-209ENST00000539662 RPS29P62273 56 aaKnown RBP5.99□□□□□ -1.45
HMGA2-209ENST00000539662 RAB37Q96AX2 223 aa5.99□□□□□ -1.45
HMGA2-209ENST00000539662 FAM218AQ96MZ4 157 aa5.99□□□□□ -1.45
HMGA2-209ENST00000539662 KRTAP13-3Q3SY46 172 aa5.98□□□□□ -1.45
HMGA2-209ENST00000539662 FP248Q71RG6 208 aaPredicted RBP5.98□□□□□ -1.45
HMGA2-209ENST00000539662 NHP2Q9NX24 153 aaKnown RBP5.98□□□□□ -1.45
HMGA2-209ENST00000539662 K7ERJ3 54 aa5.97□□□□□ -1.45
HMGA2-209ENST00000539662 SLC25A20O43772 301 aa5.97□□□□□ -1.45
HMGA2-209ENST00000539662 LORP23490 312 aaPredicted RBP5.97□□□□□ -1.45
HMGA2-209ENST00000539662 PRO1933Q9H354 126 aa5.97□□□□□ -1.45
HMGA2-209ENST00000539662 BVES-AS1Q5T3Y7 98 aa5.96□□□□□ -1.46
HMGA2-209ENST00000539662 PRO1854Q9UHT4 67 aa5.95□□□□□ -1.46
HMGA2-209ENST00000539662 HSD52Q0P140 79 aa5.94□□□□□ -1.46
HMGA2-209ENST00000539662 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.94□□□□□ -1.46
HMGA2-209ENST00000539662 UQCR10Q9UDW1 63 aa5.94□□□□□ -1.46
HMGA2-209ENST00000539662 TRIAP1O43715 76 aa5.93□□□□□ -1.46
HMGA2-209ENST00000539662 CD164Q04900 197 aa5.92□□□□□ -1.46
HMGA2-209ENST00000539662 IGFL1Q6UW32 110 aa5.92□□□□□ -1.46
HMGA2-209ENST00000539662 H3BUT2 72 aa5.91□□□□□ -1.46
HMGA2-209ENST00000539662 OCIAD2Q56VL3 154 aa5.91□□□□□ -1.46
HMGA2-209ENST00000539662 CLEC2BQ92478 149 aa5.91□□□□□ -1.46
HMGA2-209ENST00000539662 LIMD2Q9BT23 127 aa5.91□□□□□ -1.46
HMGA2-209ENST00000539662 IGLV8-61A0A075B6I0 122 aa5.9□□□□□ -1.46
HMGA2-209ENST00000539662 H0YGX0 51 aa5.9□□□□□ -1.46
HMGA2-209ENST00000539662 C1orf195Q5TG92 126 aa5.9□□□□□ -1.46
HMGA2-209ENST00000539662 F8WEM9 126 aa5.89□□□□□ -1.47
HMGA2-209ENST00000539662 KRTAP4-1Q9BYQ7 146 aa5.89□□□□□ -1.47
HMGA2-209ENST00000539662 C9orf92A6NGG3 77 aa5.88□□□□□ -1.47
HMGA2-209ENST00000539662 XP32Q5T750 250 aa5.88□□□□□ -1.47
HMGA2-209ENST00000539662 Q5XG85 94 aa5.88□□□□□ -1.47
HMGA2-209ENST00000539662 SNHG12Q9BXW3 62 aa5.88□□□□□ -1.47
HMGA2-209ENST00000539662 A0A0A0MQY5 61 aa5.86□□□□□ -1.47
HMGA2-209ENST00000539662 LOC105371267A0A1B0GV96 52 aa5.86□□□□□ -1.47
HMGA2-209ENST00000539662 PSMB2P49721 201 aa5.86□□□□□ -1.47
HMGA2-209ENST00000539662 PPDPFLQ8WWR9 84 aa5.86□□□□□ -1.47
HMGA2-209ENST00000539662 FAT4Q6V0I7 4981 aa5.86□□□□□ -1.47
HMGA2-209ENST00000539662 TRBV7-7A0A0K0K1E9 115 aa5.85□□□□□ -1.47
HMGA2-209ENST00000539662 NDUFV3P56181 108 aaKnown RBP5.85□□□□□ -1.47
HMGA2-209ENST00000539662 ASB16-AS1Q495Z4 193 aa5.85□□□□□ -1.47
HMGA2-209ENST00000539662 Q6JHZ5 121 aa5.85□□□□□ -1.47
HMGA2-209ENST00000539662 A0A1B0GV72 72 aa5.83□□□□□ -1.48
HMGA2-209ENST00000539662 A0A1B0GX51 115 aa5.83□□□□□ -1.48
HMGA2-209ENST00000539662 SMIM6P0DI80 62 aa5.83□□□□□ -1.48
HMGA2-209ENST00000539662 FABP2P12104 132 aa5.83□□□□□ -1.48
HMGA2-209ENST00000539662 NAA38Q9BRA0 125 aaKnown RBP5.82□□□□□ -1.48
HMGA2-209ENST00000539662 LOC100996750A0A140TA64 210 aa5.81□□□□□ -1.48
HMGA2-209ENST00000539662 H3BMG7 143 aa5.81□□□□□ -1.48
HMGA2-209ENST00000539662 TCL1BO95988 128 aa5.81□□□□□ -1.48
HMGA2-209ENST00000539662 KRTAP4-6Q9BYQ5 205 aa5.81□□□□□ -1.48
HMGA2-209ENST00000539662 A0A1W2PNM2 257 aa5.8□□□□□ -1.48
HMGA2-209ENST00000539662 PCP4L1A6NKN8 68 aa5.8□□□□□ -1.48
HMGA2-209ENST00000539662 SNCGO76070 127 aa5.8□□□□□ -1.48
HMGA2-209ENST00000539662 ORMDL1Q9P0S3 153 aa5.79□□□□□ -1.48
HMGA2-209ENST00000539662 LST1O00453 97 aa5.78□□□□□ -1.48
HMGA2-209ENST00000539662 DNAL4O96015 105 aa5.78□□□□□ -1.48
HMGA2-209ENST00000539662 COX6CP09669 75 aa5.78□□□□□ -1.48
HMGA2-209ENST00000539662 SEC61BP60468 96 aaKnown RBP5.78□□□□□ -1.48
HMGA2-209ENST00000539662 A0A087WSZ3 146 aa5.77□□□□□ -1.49
HMGA2-209ENST00000539662 SCGB1C2P0DMR2 95 aa5.77□□□□□ -1.49
HMGA2-209ENST00000539662 PCOTHQ58A44 107 aa5.77□□□□□ -1.49
HMGA2-209ENST00000539662 Q6Q795 121 aa5.77□□□□□ -1.49
HMGA2-209ENST00000539662 TRACP01848 142 aa5.76□□□□□ -1.49
HMGA2-209ENST00000539662 SEC61GP60059 68 aa5.76□□□□□ -1.49
HMGA2-209ENST00000539662 UBE2V1Q13404 147 aa5.76□□□□□ -1.49
HMGA2-209ENST00000539662 TEN1Q86WV5 123 aa5.76□□□□□ -1.49
HMGA2-209ENST00000539662 Q96NJ1 140 aa5.76□□□□□ -1.49
HMGA2-209ENST00000539662 M0R143 59 aa5.75□□□□□ -1.49
HMGA2-209ENST00000539662 TMEM256-PLSCR3K7ERE1 68 aa5.73□□□□□ -1.49
HMGA2-209ENST00000539662 BATFQ16520 125 aa5.73□□□□□ -1.49
HMGA2-209ENST00000539662 ANKRD29Q8N6D5 301 aa5.73□□□□□ -1.49
HMGA2-209ENST00000539662 TSTD3H0UI37 97 aa5.72□□□□□ -1.49
HMGA2-209ENST00000539662 RPL37P61927 97 aaKnown RBP5.72□□□□□ -1.49
HMGA2-209ENST00000539662 OBSCN-AS1Q96MR7 158 aa5.72□□□□□ -1.49
HMGA2-209ENST00000539662 BAALC-AS2P0C853 105 aa5.71□□□□□ -1.5
HMGA2-209ENST00000539662 A0A0U1RQV1 116 aa5.7□□□□□ -1.5
HMGA2-209ENST00000539662 KRTAP19-2Q3LHN2 52 aa5.7□□□□□ -1.5
HMGA2-209ENST00000539662 SS18L2Q9UHA2 77 aa5.7□□□□□ -1.5
HMGA2-209ENST00000539662 TRBV7-4A0A0J9YYF1 115 aa5.69□□□□□ -1.5
HMGA2-209ENST00000539662 H3BQ85 93 aa5.69□□□□□ -1.5
HMGA2-209ENST00000539662 CCKP06307 115 aa5.69□□□□□ -1.5
HMGA2-209ENST00000539662 DEFB116Q30KQ4 102 aa5.69□□□□□ -1.5
HMGA2-209ENST00000539662 ATXN8Q156A1 80 aa5.68□□□□□ -1.5
HMGA2-209ENST00000539662 TAX1BP3O14907 124 aa5.67□□□□□ -1.5
HMGA2-209ENST00000539662 DSCR10P59022 87 aa5.67□□□□□ -1.5
HMGA2-209ENST00000539662 RBM3P98179 157 aaKnown RBP5.67□□□□□ -1.5
HMGA2-209ENST00000539662 VPS25Q9BRG1 176 aa5.67□□□□□ -1.5
HMGA2-209ENST00000539662 NOTCH2NLQ7Z3S9 236 aa5.66□□□□□ -1.5
HMGA2-209ENST00000539662 LINC00472Q9H8W2 130 aa5.66□□□□□ -1.5
HMGA2-209ENST00000539662 C9orf118A6NHY6 69 aa5.64□□□□□ -1.51
HMGA2-209ENST00000539662 IGKV4-1P06312 121 aa5.64□□□□□ -1.51
HMGA2-209ENST00000539662 SIGMAR1Q99720 223 aa5.64□□□□□ -1.51
HMGA2-209ENST00000539662 C9JAW5 83 aa5.63□□□□□ -1.51
HMGA2-209ENST00000539662 Q75L30 129 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 120.4 ms