RNA–Protein interactions for RNA: ENST00000539091.5

RAP1B-220, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAP1B, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-220ENST00000539091 SNHG12Q9BXW3 62 aa12.12□□□□□ -0.47
RAP1B-220ENST00000539091 Q8N377 158 aa12.1□□□□□ -0.47
RAP1B-220ENST00000539091 PPDPFLQ8WWR9 84 aa12.1□□□□□ -0.47
RAP1B-220ENST00000539091 SPINK1P00995 79 aa12.08□□□□□ -0.48
RAP1B-220ENST00000539091 LINC01547P58512 204 aaPredicted RBP12.08□□□□□ -0.48
RAP1B-220ENST00000539091 CLEC2BQ92478 149 aa12.07□□□□□ -0.48
RAP1B-220ENST00000539091 TNXBP22105 4242 aa12.07□□□□□ -0.48
RAP1B-220ENST00000539091 FAM218AQ96MZ4 157 aa12.06□□□□□ -0.48
RAP1B-220ENST00000539091 HERC1Q15751 4861 aa12.05□□□□□ -0.48
RAP1B-220ENST00000539091 PRR4Q16378 134 aa12.05□□□□□ -0.48
RAP1B-220ENST00000539091 H3BQ85 93 aa12.03□□□□□ -0.48
RAP1B-220ENST00000539091 SMIM29Q86T20 159 aa12.03□□□□□ -0.48
RAP1B-220ENST00000539091 FABP2P12104 132 aa12.02□□□□□ -0.49
RAP1B-220ENST00000539091 LYRM7Q5U5X0 104 aa12.02□□□□□ -0.49
RAP1B-220ENST00000539091 HRCT1Q6UXD1 115 aa12.01□□□□□ -0.49
RAP1B-220ENST00000539091 ORMDL1Q9P0S3 153 aa12.01□□□□□ -0.49
RAP1B-220ENST00000539091 Q6JHZ5 121 aa11.99□□□□□ -0.49
RAP1B-220ENST00000539091 LIMD2Q9BT23 127 aa11.98□□□□□ -0.49
RAP1B-220ENST00000539091 RPS29P62273 56 aaKnown RBP11.97□□□□□ -0.49
RAP1B-220ENST00000539091 TRACP01848 142 aa11.96□□□□□ -0.49
RAP1B-220ENST00000539091 CD164Q04900 197 aa11.96□□□□□ -0.49
RAP1B-220ENST00000539091 RETNLBQ9BQ08 111 aa11.95□□□□□ -0.5
RAP1B-220ENST00000539091 NAA38Q9BRA0 125 aaKnown RBP11.95□□□□□ -0.5
RAP1B-220ENST00000539091 TMEM256-PLSCR3K7ERE1 68 aa11.94□□□□□ -0.5
RAP1B-220ENST00000539091 NDUFV3P56181 108 aaKnown RBP11.94□□□□□ -0.5
RAP1B-220ENST00000539091 LST1O00453 97 aa11.93□□□□□ -0.5
RAP1B-220ENST00000539091 ATXN8Q156A1 80 aa11.93□□□□□ -0.5
RAP1B-220ENST00000539091 IGLV8-61A0A075B6I0 122 aa11.9□□□□□ -0.5
RAP1B-220ENST00000539091 H3BMG7 143 aa11.9□□□□□ -0.5
RAP1B-220ENST00000539091 H3BUT2 72 aa11.9□□□□□ -0.5
RAP1B-220ENST00000539091 IGLV7-46A0A075B6I9 117 aa11.87□□□□□ -0.51
RAP1B-220ENST00000539091 PCP4L1A6NKN8 68 aa11.87□□□□□ -0.51
RAP1B-220ENST00000539091 FP248Q71RG6 208 aaPredicted RBP11.87□□□□□ -0.51
RAP1B-220ENST00000539091 TRBV20-1A0A075B6N2 111 aa11.86□□□□□ -0.51
RAP1B-220ENST00000539091 A0A0G2JQZ4 141 aa11.86□□□□□ -0.51
RAP1B-220ENST00000539091 C9orf118A6NHY6 69 aa11.86□□□□□ -0.51
RAP1B-220ENST00000539091 TCL1BO95988 128 aa11.86□□□□□ -0.51
RAP1B-220ENST00000539091 IGFL1Q6UW32 110 aa11.86□□□□□ -0.51
RAP1B-220ENST00000539091 BAALC-AS2P0C853 105 aa11.84□□□□□ -0.51
RAP1B-220ENST00000539091 UBE2V1Q13404 147 aa11.83□□□□□ -0.52
RAP1B-220ENST00000539091 COL5A1-AS1Q5SY13 56 aa11.83□□□□□ -0.52
RAP1B-220ENST00000539091 A0A1B0GV72 72 aa11.81□□□□□ -0.52
RAP1B-220ENST00000539091 TAX1BP3O14907 124 aa11.81□□□□□ -0.52
RAP1B-220ENST00000539091 ANKRD29Q8N6D5 301 aa11.81□□□□□ -0.52
RAP1B-220ENST00000539091 A0A1W2PPM0 123 aa11.79□□□□□ -0.52
RAP1B-220ENST00000539091 TRBV7-7A0A0K0K1E9 115 aa11.78□□□□□ -0.52
RAP1B-220ENST00000539091 Q5XG85 94 aa11.77□□□□□ -0.53
RAP1B-220ENST00000539091 TEN1Q86WV5 123 aa11.77□□□□□ -0.53
RAP1B-220ENST00000539091 RBM3P98179 157 aaKnown RBP11.75□□□□□ -0.53
RAP1B-220ENST00000539091 DSCR8Q96T75 97 aa11.75□□□□□ -0.53
RAP1B-220ENST00000539091 CDIP1Q9H305 208 aa11.75□□□□□ -0.53
RAP1B-220ENST00000539091 SS18L2Q9UHA2 77 aa11.75□□□□□ -0.53
RAP1B-220ENST00000539091 C9JAW5 83 aa11.74□□□□□ -0.53
RAP1B-220ENST00000539091 Q6Q795 121 aa11.72□□□□□ -0.53
RAP1B-220ENST00000539091 HMCN2Q8NDA2 5059 aa11.72□□□□□ -0.53
RAP1B-220ENST00000539091 TPRXLQ17RH7 258 aa11.71□□□□□ -0.53
RAP1B-220ENST00000539091 SPCS1Q9Y6A9 102 aa11.7□□□□□ -0.54
RAP1B-220ENST00000539091 JMJD7-PLA2G4BH0Y9G9 81 aa11.69□□□□□ -0.54
RAP1B-220ENST00000539091 CCKP06307 115 aa11.68□□□□□ -0.54
RAP1B-220ENST00000539091 VPS25Q9BRG1 176 aa11.68□□□□□ -0.54
RAP1B-220ENST00000539091 C1orf195Q5TG92 126 aa11.67□□□□□ -0.54
RAP1B-220ENST00000539091 A0A087WSZ3 146 aa11.66□□□□□ -0.54
RAP1B-220ENST00000539091 TRBV7-4A0A0J9YYF1 115 aa11.65□□□□□ -0.54
RAP1B-220ENST00000539091 ASB16-AS1Q495Z4 193 aa11.65□□□□□ -0.54
RAP1B-220ENST00000539091 A0A1W2PNM2 257 aa11.63□□□□□ -0.55
RAP1B-220ENST00000539091 H3BT86 120 aa11.63□□□□□ -0.55
RAP1B-220ENST00000539091 PDE6GP18545 87 aa11.61□□□□□ -0.55
RAP1B-220ENST00000539091 C21orf62-AS1Q17RA5 79 aa11.61□□□□□ -0.55
RAP1B-220ENST00000539091 KRTAP13-3Q3SY46 172 aa11.6□□□□□ -0.55
RAP1B-220ENST00000539091 GTF2H5Q6ZYL4 71 aa11.58□□□□□ -0.56
RAP1B-220ENST00000539091 MTURNQ8N3F0 131 aa11.58□□□□□ -0.56
RAP1B-220ENST00000539091 C14orf132Q9NPU4 83 aa11.55□□□□□ -0.56
RAP1B-220ENST00000539091 C9orf92A6NGG3 77 aa11.54□□□□□ -0.56
RAP1B-220ENST00000539091 K7EP34 96 aa11.54□□□□□ -0.56
RAP1B-220ENST00000539091 LOC110117498A0A087WWA1 95 aa11.53□□□□□ -0.56
RAP1B-220ENST00000539091 LRP2P98164 4655 aa11.53□□□□□ -0.56
RAP1B-220ENST00000539091 Q6ZQT0 140 aa11.5□□□□□ -0.57
RAP1B-220ENST00000539091 SIGMAR1Q99720 223 aa11.5□□□□□ -0.57
RAP1B-220ENST00000539091 A0A1B0GW54 56 aa11.49□□□□□ -0.57
RAP1B-220ENST00000539091 LCE2DQ5TA82 110 aaPredicted RBP11.49□□□□□ -0.57
RAP1B-220ENST00000539091 OBSCN-AS1Q96MR7 158 aa11.47□□□□□ -0.57
RAP1B-220ENST00000539091 IGKV4-1P06312 121 aa11.46□□□□□ -0.57
RAP1B-220ENST00000539091 LPAP08519 4548 aa11.45□□□□□ -0.58
RAP1B-220ENST00000539091 SEC61BP60468 96 aaKnown RBP11.44□□□□□ -0.58
RAP1B-220ENST00000539091 XP32Q5T750 250 aa11.43□□□□□ -0.58
RAP1B-220ENST00000539091 Q96NJ1 140 aa11.4□□□□□ -0.58
RAP1B-220ENST00000539091 F8W1H4 67 aa11.39□□□□□ -0.59
RAP1B-220ENST00000539091 DEFB116Q30KQ4 102 aa11.39□□□□□ -0.59
RAP1B-220ENST00000539091 J3KT08 172 aa11.38□□□□□ -0.59
RAP1B-220ENST00000539091 SMCPP49901 116 aaPredicted RBP11.37□□□□□ -0.59
RAP1B-220ENST00000539091 NREPQ16612 68 aa11.37□□□□□ -0.59
RAP1B-220ENST00000539091 LINC00472Q9H8W2 130 aa11.37□□□□□ -0.59
RAP1B-220ENST00000539091 PRO0461Q9UI25 63 aa11.36□□□□□ -0.59
RAP1B-220ENST00000539091 NDUFB1O75438 58 aa11.34□□□□□ -0.59
RAP1B-220ENST00000539091 IGHV6-1A0A0B4J1U7 121 aa11.31□□□□□ -0.6
RAP1B-220ENST00000539091 LINC00313P59037 77 aa11.31□□□□□ -0.6
RAP1B-220ENST00000539091 UBR4Q5T4S7 5183 aa11.31□□□□□ -0.6
RAP1B-220ENST00000539091 DSCR10P59022 87 aa11.28□□□□□ -0.6
RAP1B-220ENST00000539091 A0A0U1RQV1 116 aa11.25□□□□□ -0.61
RAP1B-220ENST00000539091 A0A1B0GVX0 72 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms