RNA–Protein interactions for RNA: ENST00000538686.6

USP3-203, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-203ENST00000538686 MYO9AB2RTY4 2548 aa7.49□□□□□ -1.21
USP3-203ENST00000538686 PTPN13Q12923 2485 aa7.49□□□□□ -1.21
USP3-203ENST00000538686 ANKRD17O75179 2603 aaKnown RBP7.49□□□□□ -1.21
USP3-203ENST00000538686 CELSR2Q9HCU4 2923 aa7.48□□□□□ -1.21
USP3-203ENST00000538686 NOTCH2NLQ7Z3S9 236 aa7.47□□□□□ -1.21
USP3-203ENST00000538686 KRTAP13-3Q3SY46 172 aa7.45□□□□□ -1.22
USP3-203ENST00000538686 BDP1A6H8Y1 2624 aa7.45□□□□□ -1.22
USP3-203ENST00000538686 DNAH10OSP0CZ25 163 aa7.44□□□□□ -1.22
USP3-203ENST00000538686 MXRA5Q9NR99 2828 aa7.43□□□□□ -1.22
USP3-203ENST00000538686 UTP20O75691 2785 aaKnown RBP7.42□□□□□ -1.22
USP3-203ENST00000538686 IGLV7-43P04211 117 aa7.42□□□□□ -1.22
USP3-203ENST00000538686 ZNF292O60281 2723 aa7.4□□□□□ -1.22
USP3-203ENST00000538686 ZFYVE26Q68DK2 2539 aa7.4□□□□□ -1.22
USP3-203ENST00000538686 SPTBN4Q9H254 2564 aa7.4□□□□□ -1.23
USP3-203ENST00000538686 OTOGQ6ZRI0 2925 aa7.38□□□□□ -1.23
USP3-203ENST00000538686 OXLD1Q5BKU9 147 aa7.37□□□□□ -1.23
USP3-203ENST00000538686 Q5W150 140 aa7.37□□□□□ -1.23
USP3-203ENST00000538686 TEX15Q9BXT5 2789 aa7.37□□□□□ -1.23
USP3-203ENST00000538686 A0A096LNI7 61 aa7.37□□□□□ -1.23
USP3-203ENST00000538686 IGLV5-52A0A0A0MRZ9 124 aa7.37□□□□□ -1.23
USP3-203ENST00000538686 A8MUU9 505 aa7.37□□□□□ -1.23
USP3-203ENST00000538686 NBEAL2Q6ZNJ1 2754 aa7.37□□□□□ -1.23
USP3-203ENST00000538686 GCN1Q92616 2671 aaKnown RBP7.36□□□□□ -1.23
USP3-203ENST00000538686 K7EIL1 84 aa7.36□□□□□ -1.23
USP3-203ENST00000538686 NF1P21359 2839 aa7.35□□□□□ -1.23
USP3-203ENST00000538686 TENM2Q9NT68 2774 aa7.35□□□□□ -1.23
USP3-203ENST00000538686 DEFB113Q30KQ7 82 aa7.34□□□□□ -1.23
USP3-203ENST00000538686 CUBNO60494 3623 aa7.33□□□□□ -1.24
USP3-203ENST00000538686 USP9YO00507 2555 aaPredicted RBP7.31□□□□□ -1.24
USP3-203ENST00000538686 FAM229AH3BQW9 127 aa7.31□□□□□ -1.24
USP3-203ENST00000538686 LINC00483Q53H64 154 aa7.31□□□□□ -1.24
USP3-203ENST00000538686 CASC10Q5T4H9 136 aa7.31□□□□□ -1.24
USP3-203ENST00000538686 P0C880 135 aa7.31□□□□□ -1.24
USP3-203ENST00000538686 USP9XQ93008 2570 aaPredicted RBP7.3□□□□□ -1.24
USP3-203ENST00000538686 ZANQ9Y493 2812 aa7.29□□□□□ -1.24
USP3-203ENST00000538686 LY6G6CO95867 125 aa7.28□□□□□ -1.24
USP3-203ENST00000538686 IGKV2-30P06310 120 aa7.28□□□□□ -1.24
USP3-203ENST00000538686 LINC00304Q8N9R0 145 aa7.28□□□□□ -1.24
USP3-203ENST00000538686 HIVEP2P31629 2446 aa7.28□□□□□ -1.24
USP3-203ENST00000538686 IGLV9-49A0A0B4J1Y8 123 aa7.28□□□□□ -1.24
USP3-203ENST00000538686 FBN2P35556 2912 aa7.27□□□□□ -1.24
USP3-203ENST00000538686 IGF2RP11717 2491 aa7.27□□□□□ -1.25
USP3-203ENST00000538686 EPG5Q9HCE0 2579 aa7.26□□□□□ -1.25
USP3-203ENST00000538686 NIPBLQ6KC79 2804 aaeCLIP7.25□□□□□ -1.25
USP3-203ENST00000538686 F8P00451 2351 aa7.25□□□□□ -1.25
USP3-203ENST00000538686 KRTAP13-1Q8IUC0 172 aa7.25□□□□□ -1.25
USP3-203ENST00000538686 A0A0A0MQY5 61 aa7.24□□□□□ -1.25
USP3-203ENST00000538686 ANK3Q12955 4377 aaKnown RBP7.24□□□□□ -1.25
USP3-203ENST00000538686 INAFM1C9JVW0 142 aa7.24□□□□□ -1.25
USP3-203ENST00000538686 MUC6Q6W4X9 2439 aa7.23□□□□□ -1.25
USP3-203ENST00000538686 CHTF8P0CG12 524 aa7.23□□□□□ -1.25
USP3-203ENST00000538686 KRTAP11-1Q8IUC1 163 aa7.23□□□□□ -1.25
USP3-203ENST00000538686 KRTAP10-3P60369 221 aa7.22□□□□□ -1.25
USP3-203ENST00000538686 LRRK2Q5S007 2527 aa7.22□□□□□ -1.25
USP3-203ENST00000538686 DOPEY1Q5JWR5 2465 aa7.21□□□□□ -1.26
USP3-203ENST00000538686 ZFHX2Q9C0A1 2572 aaPredicted RBP7.21□□□□□ -1.26
USP3-203ENST00000538686 CFAP46Q8IYW2 2715 aa7.21□□□□□ -1.26
USP3-203ENST00000538686 KRTAP1-3Q8IUG1 177 aa7.21□□□□□ -1.26
USP3-203ENST00000538686 C14orf177Q52M58 125 aa7.18□□□□□ -1.26
USP3-203ENST00000538686 IGKV2D-30A0A075B6S6 120 aa7.17□□□□□ -1.26
USP3-203ENST00000538686 H0YAA0 97 aa7.17□□□□□ -1.26
USP3-203ENST00000538686 K7ERS5 55 aa7.17□□□□□ -1.26
USP3-203ENST00000538686 NAV2Q8IVL1 2488 aa7.17□□□□□ -1.26
USP3-203ENST00000538686 NUPR2A6NF83 97 aa7.16□□□□□ -1.26
USP3-203ENST00000538686 WWC2-AS2Q96NR7 200 aa7.16□□□□□ -1.26
USP3-203ENST00000538686 KMT2BQ9UMN6 2715 aaPredicted RBP7.15□□□□□ -1.26
USP3-203ENST00000538686 SONP18583 2426 aaKnown RBP7.15□□□□□ -1.26
USP3-203ENST00000538686 PANO1I0J062 215 aa7.15□□□□□ -1.26
USP3-203ENST00000538686 UNC79Q9P2D8 2635 aa7.14□□□□□ -1.27
USP3-203ENST00000538686 Q6ZSA8 131 aa7.14□□□□□ -1.27
USP3-203ENST00000538686 KRTAP10-9P60411 292 aa7.13□□□□□ -1.27
USP3-203ENST00000538686 KRTAP16-1A8MUX0 517 aa7.13□□□□□ -1.27
USP3-203ENST00000538686 DNAH1Q9P2D7 4330 aa7.13□□□□□ -1.27
USP3-203ENST00000538686 SPINK6Q6UWN8 80 aa7.12□□□□□ -1.27
USP3-203ENST00000538686 C20orf166-AS1Q96NR2 134 aa7.12□□□□□ -1.27
USP3-203ENST00000538686 MTORP42345 2549 aa7.11□□□□□ -1.27
USP3-203ENST00000538686 TTC28Q96AY4 2481 aa7.1□□□□□ -1.27
USP3-203ENST00000538686 SPINT4Q6UDR6 99 aa7.1□□□□□ -1.27
USP3-203ENST00000538686 CHD8Q9HCK8 2581 aa7.1□□□□□ -1.27
USP3-203ENST00000538686 SSBP3-AS1Q7Z2R9 100 aa7.09□□□□□ -1.27
USP3-203ENST00000538686 ANAPC11Q9NYG5 84 aa7.09□□□□□ -1.27
USP3-203ENST00000538686 SETD2Q9BYW2 2564 aaPredicted RBP7.09□□□□□ -1.28
USP3-203ENST00000538686 A0A1B0GU33 70 aa7.08□□□□□ -1.28
USP3-203ENST00000538686 KRTAP1-1Q07627 177 aa7.07□□□□□ -1.28
USP3-203ENST00000538686 PKD1L2Q7Z442 2459 aa7.07□□□□□ -1.28
USP3-203ENST00000538686 PSORS1C2Q9UIG4 136 aa7.06□□□□□ -1.28
USP3-203ENST00000538686 A0A087WTM6 91 aa7.05□□□□□ -1.28
USP3-203ENST00000538686 NDUFAF8A1L188 74 aa7.05□□□□□ -1.28
USP3-203ENST00000538686 POLQO75417 2590 aa7.05□□□□□ -1.28
USP3-203ENST00000538686 H1FX-AS1Q4G0G2 97 aa7.04□□□□□ -1.28
USP3-203ENST00000538686 HIVEP1P15822 2718 aa7.02□□□□□ -1.29
USP3-203ENST00000538686 SPINK1P00995 79 aa7.02□□□□□ -1.29
USP3-203ENST00000538686 ACACBO00763 2458 aa7□□□□□ -1.29
USP3-203ENST00000538686 KRTAP15-1Q3LI76 137 aa7□□□□□ -1.29
USP3-203ENST00000538686 UBR5O95071 2799 aaPredicted RBP7□□□□□ -1.29
USP3-203ENST00000538686 CENPEQ02224 2701 aa6.99□□□□□ -1.29
USP3-203ENST00000538686 SRRM2Q9UQ35 2752 aaKnown RBP6.99□□□□□ -1.29
USP3-203ENST00000538686 CRIPTQ9P021 101 aa6.97□□□□□ -1.29
USP3-203ENST00000538686 PIEZO1Q92508 2521 aa6.97□□□□□ -1.29
USP3-203ENST00000538686 CCDC168Q8NDH2 2452 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms