RNA–Protein interactions for RNA: ENST00000538439.1

NPIPB3-209, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 4

Gene NPIPB3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-209ENST00000538439 A0A1B0GV90 55 aa6.21□□□□□ -1.42
NPIPB3-209ENST00000538439 hADV29S1A0JD25 119 aa6.21□□□□□ -1.42
NPIPB3-209ENST00000538439 K7EP34 96 aa6.21□□□□□ -1.42
NPIPB3-209ENST00000538439 LST1O00453 97 aa6.21□□□□□ -1.42
NPIPB3-209ENST00000538439 DNAL4O96015 105 aa6.21□□□□□ -1.42
NPIPB3-209ENST00000538439 C1orf137Q5JT78 98 aa6.21□□□□□ -1.42
NPIPB3-209ENST00000538439 H0Y9J4 135 aa6.2□□□□□ -1.42
NPIPB3-209ENST00000538439 TRACP01848 142 aa6.2□□□□□ -1.42
NPIPB3-209ENST00000538439 PRLHP81277 87 aa6.2□□□□□ -1.42
NPIPB3-209ENST00000538439 FAM218AQ96MZ4 157 aa6.2□□□□□ -1.42
NPIPB3-209ENST00000538439 FAT1Q14517 4588 aa6.2□□□□□ -1.42
NPIPB3-209ENST00000538439 CDK2AP2O75956 126 aa6.19□□□□□ -1.42
NPIPB3-209ENST00000538439 DMBT1Q9UGM3 2413 aaPredicted RBP6.18□□□□□ -1.42
NPIPB3-209ENST00000538439 H3BMG7 143 aa6.18□□□□□ -1.42
NPIPB3-209ENST00000538439 HIGD2AQ9BW72 106 aa6.18□□□□□ -1.42
NPIPB3-209ENST00000538439 SMR3BP02814 79 aaPredicted RBP6.17□□□□□ -1.42
NPIPB3-209ENST00000538439 IGLV7-43P04211 117 aa6.17□□□□□ -1.42
NPIPB3-209ENST00000538439 RPL37AP61513 92 aaKnown RBP6.17□□□□□ -1.42
NPIPB3-209ENST00000538439 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.17□□□□□ -1.42
NPIPB3-209ENST00000538439 SMCR5Q8TEV8 140 aa6.17□□□□□ -1.42
NPIPB3-209ENST00000538439 Q9BRP9 147 aa6.17□□□□□ -1.42
NPIPB3-209ENST00000538439 ZNF861PO60384 105 aa6.16□□□□□ -1.42
NPIPB3-209ENST00000538439 OCIAD2Q56VL3 154 aa6.16□□□□□ -1.42
NPIPB3-209ENST00000538439 VPS13BQ7Z7G8 4022 aa6.16□□□□□ -1.42
NPIPB3-209ENST00000538439 HMCN2Q8NDA2 5059 aa6.16□□□□□ -1.42
NPIPB3-209ENST00000538439 C9JAW5 83 aa6.15□□□□□ -1.42
NPIPB3-209ENST00000538439 H3BQ85 93 aa6.15□□□□□ -1.42
NPIPB3-209ENST00000538439 Q6ZQY7 126 aa6.15□□□□□ -1.42
NPIPB3-209ENST00000538439 KRTAP13-1Q8IUC0 172 aa6.15□□□□□ -1.42
NPIPB3-209ENST00000538439 ORMDL1Q9P0S3 153 aa6.15□□□□□ -1.42
NPIPB3-209ENST00000538439 ERC2-IT1O76042 136 aa6.14□□□□□ -1.43
NPIPB3-209ENST00000538439 SRRM2Q9UQ35 2752 aaKnown RBP6.13□□□□□ -1.43
NPIPB3-209ENST00000538439 BAALC-AS2P0C853 105 aa6.13□□□□□ -1.43
NPIPB3-209ENST00000538439 ZNF706Q9Y5V0 76 aaPredicted RBP6.13□□□□□ -1.43
NPIPB3-209ENST00000538439 IGLV9-49A0A0B4J1Y8 123 aa6.12□□□□□ -1.43
NPIPB3-209ENST00000538439 F8W1H4 67 aa6.12□□□□□ -1.43
NPIPB3-209ENST00000538439 H3BT86 120 aa6.12□□□□□ -1.43
NPIPB3-209ENST00000538439 TMEM256-PLSCR3K7ERE1 68 aa6.12□□□□□ -1.43
NPIPB3-209ENST00000538439 DEFB105AQ8NG35 78 aa6.12□□□□□ -1.43
NPIPB3-209ENST00000538439 PPDPFLQ8WWR9 84 aa6.12□□□□□ -1.43
NPIPB3-209ENST00000538439 MTURNQ8N3F0 131 aa6.11□□□□□ -1.43
NPIPB3-209ENST00000538439 ST20-AS1Q8NBB2 130 aa6.11□□□□□ -1.43
NPIPB3-209ENST00000538439 TEX49A0A1B0GTD5 131 aa6.1□□□□□ -1.43
NPIPB3-209ENST00000538439 ANKRD29Q8N6D5 301 aa6.1□□□□□ -1.43
NPIPB3-209ENST00000538439 IGLV5-48A0A075B6I7 105 aa6.09□□□□□ -1.43
NPIPB3-209ENST00000538439 SPINK6Q6UWN8 80 aa6.09□□□□□ -1.43
NPIPB3-209ENST00000538439 PRO0461Q9UI25 63 aa6.09□□□□□ -1.43
NPIPB3-209ENST00000538439 LINC01547P58512 204 aaPredicted RBP6.08□□□□□ -1.44
NPIPB3-209ENST00000538439 Q8N377 158 aa6.08□□□□□ -1.44
NPIPB3-209ENST00000538439 SPRR4Q96PI1 79 aa6.08□□□□□ -1.44
NPIPB3-209ENST00000538439 LAMTOR3Q9UHA4 124 aa6.08□□□□□ -1.44
NPIPB3-209ENST00000538439 SPRR1BP22528 89 aa6.07□□□□□ -1.44
NPIPB3-209ENST00000538439 Q5VSD8 79 aa6.07□□□□□ -1.44
NPIPB3-209ENST00000538439 LINC01600Q96MT4 127 aa6.07□□□□□ -1.44
NPIPB3-209ENST00000538439 F8WEM9 126 aa6.06□□□□□ -1.44
NPIPB3-209ENST00000538439 NDUFV3P56181 108 aaKnown RBP6.06□□□□□ -1.44
NPIPB3-209ENST00000538439 Q8N9P0 234 aaPredicted RBP6.06□□□□□ -1.44
NPIPB3-209ENST00000538439 JMJD7-PLA2G4BH0Y9G9 81 aa6.05□□□□□ -1.44
NPIPB3-209ENST00000538439 KRTAP10-4P60372 401 aaPredicted RBP6.05□□□□□ -1.44
NPIPB3-209ENST00000538439 LINC00483Q53H64 154 aa6.04□□□□□ -1.44
NPIPB3-209ENST00000538439 TEN1Q86WV5 123 aa6.03□□□□□ -1.44
NPIPB3-209ENST00000538439 KRTAP4-9Q9BYQ8 210 aa6.03□□□□□ -1.44
NPIPB3-209ENST00000538439 RBM3P98179 157 aaKnown RBP6.02□□□□□ -1.45
NPIPB3-209ENST00000538439 ETDBQ3ZM63 59 aa6.02□□□□□ -1.45
NPIPB3-209ENST00000538439 SMIM29Q86T20 159 aa6.02□□□□□ -1.45
NPIPB3-209ENST00000538439 C3orf22Q8N5N4 141 aa6.02□□□□□ -1.45
NPIPB3-209ENST00000538439 DNAH8Q96JB1 4490 aa6.01□□□□□ -1.45
NPIPB3-209ENST00000538439 IGKV2D-30A0A075B6S6 120 aa6.01□□□□□ -1.45
NPIPB3-209ENST00000538439 FAM229BQ4G0N7 80 aa6.01□□□□□ -1.45
NPIPB3-209ENST00000538439 ANAPC11Q9NYG5 84 aa6.01□□□□□ -1.45
NPIPB3-209ENST00000538439 FLG2Q5D862 2391 aaPredicted RBP6.01□□□□□ -1.45
NPIPB3-209ENST00000538439 A0A1B0GV72 72 aa6□□□□□ -1.45
NPIPB3-209ENST00000538439 C9orf153Q5TBE3 101 aa6□□□□□ -1.45
NPIPB3-209ENST00000538439 DSCR8Q96T75 97 aa6□□□□□ -1.45
NPIPB3-209ENST00000538439 KRTAP4-7Q9BYR0 210 aa6□□□□□ -1.45
NPIPB3-209ENST00000538439 CRYGAP11844 174 aa5.99□□□□□ -1.45
NPIPB3-209ENST00000538439 OBSCN-AS1Q96MR7 158 aa5.99□□□□□ -1.45
NPIPB3-209ENST00000538439 IGLV8-61A0A075B6I0 122 aa5.98□□□□□ -1.45
NPIPB3-209ENST00000538439 KRTAP1-4P0C5Y4 121 aa5.98□□□□□ -1.45
NPIPB3-209ENST00000538439 PDE6GP18545 87 aa5.98□□□□□ -1.45
NPIPB3-209ENST00000538439 Q6JHZ5 121 aa5.98□□□□□ -1.45
NPIPB3-209ENST00000538439 MOBPQ13875 183 aa5.97□□□□□ -1.45
NPIPB3-209ENST00000538439 Q8NBF4 154 aa5.97□□□□□ -1.45
NPIPB3-209ENST00000538439 C14orf132Q9NPU4 83 aa5.97□□□□□ -1.45
NPIPB3-209ENST00000538439 TRBV7-4A0A0J9YYF1 115 aa5.96□□□□□ -1.46
NPIPB3-209ENST00000538439 SSBP3-AS1Q7Z2R9 100 aa5.96□□□□□ -1.46
NPIPB3-209ENST00000538439 LRP1Q07954 4544 aaKnown RBP5.95□□□□□ -1.46
NPIPB3-209ENST00000538439 LOC110117498A0A087WWA1 95 aa5.95□□□□□ -1.46
NPIPB3-209ENST00000538439 A0A087X002 238 aa5.94□□□□□ -1.46
NPIPB3-209ENST00000538439 IGFL1Q6UW32 110 aa5.94□□□□□ -1.46
NPIPB3-209ENST00000538439 TYMSOSQ8TAI1 123 aa5.94□□□□□ -1.46
NPIPB3-209ENST00000538439 RNF213Q63HN8 5207 aa5.94□□□□□ -1.46
NPIPB3-209ENST00000538439 J3QR89 54 aa5.93□□□□□ -1.46
NPIPB3-209ENST00000538439 CCKP06307 115 aa5.93□□□□□ -1.46
NPIPB3-209ENST00000538439 KRTAP13-2Q52LG2 175 aa5.93□□□□□ -1.46
NPIPB3-209ENST00000538439 Q6ZQT0 140 aa5.93□□□□□ -1.46
NPIPB3-209ENST00000538439 VPS25Q9BRG1 176 aa5.93□□□□□ -1.46
NPIPB3-209ENST00000538439 KRTAP4-11Q9BYQ6 195 aa5.92□□□□□ -1.46
NPIPB3-209ENST00000538439 FAT3Q8TDW7 4589 aa5.91□□□□□ -1.46
NPIPB3-209ENST00000538439 A0A0G2JQZ4 141 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms