RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 CC2D2AQ9P2K1 1620 aa-1.09□□□□□ -2.58
CCDC7-208ENST00000537047 TROQ12816 1431 aaPredicted RBP-1.09□□□□□ -2.58
CCDC7-208ENST00000537047 SHPRHQ149N8 1683 aa-1.1□□□□□ -2.58
CCDC7-208ENST00000537047 TOPAZ1Q8N9V7 1692 aa-1.1□□□□□ -2.58
CCDC7-208ENST00000537047 ANKRD36A6QL64 1941 aa-1.1□□□□□ -2.59
CCDC7-208ENST00000537047 C2orf88Q9BSF0 95 aa-1.1□□□□□ -2.59
CCDC7-208ENST00000537047 NCOA3Q9Y6Q9 1424 aa-1.1□□□□□ -2.59
CCDC7-208ENST00000537047 CICQ96RK0 1608 aaPredicted RBP-1.11□□□□□ -2.59
CCDC7-208ENST00000537047 ABCC5O15440 1437 aa-1.11□□□□□ -2.59
CCDC7-208ENST00000537047 TRBV7-7A0A0K0K1E9 115 aa-1.11□□□□□ -2.59
CCDC7-208ENST00000537047 LYNX1G3V0Z9 82 aa-1.11□□□□□ -2.59
CCDC7-208ENST00000537047 NMSQ5H8A3 153 aa-1.11□□□□□ -2.59
CCDC7-208ENST00000537047 WFDC13Q8IUB5 93 aa-1.11□□□□□ -2.59
CCDC7-208ENST00000537047 MPC2O95563 127 aa-1.12□□□□□ -2.59
CCDC7-208ENST00000537047 MLH3Q9UHC1 1453 aa-1.12□□□□□ -2.59
CCDC7-208ENST00000537047 GNGT2O14610 69 aa-1.13□□□□□ -2.59
CCDC7-208ENST00000537047 UQCRHP07919 91 aa-1.13□□□□□ -2.59
CCDC7-208ENST00000537047 TRGV9Q99603 122 aa-1.13□□□□□ -2.59
CCDC7-208ENST00000537047 PSENENQ9NZ42 101 aa-1.13□□□□□ -2.59
CCDC7-208ENST00000537047 ABCA3Q99758 1704 aa-1.13□□□□□ -2.59
CCDC7-208ENST00000537047 ABCC2Q92887 1545 aa-1.14□□□□□ -2.59
CCDC7-208ENST00000537047 H7BZZ5 65 aa-1.14□□□□□ -2.59
CCDC7-208ENST00000537047 DEFB110Q30KQ9 67 aa-1.14□□□□□ -2.59
CCDC7-208ENST00000537047 ANKRD50Q9ULJ7 1429 aa-1.15□□□□□ -2.59
CCDC7-208ENST00000537047 FYCO1Q9BQS8 1478 aa-1.15□□□□□ -2.59
CCDC7-208ENST00000537047 AP4S1Q9Y587 144 aa-1.15□□□□□ -2.59
CCDC7-208ENST00000537047 MON2Q7Z3U7 1717 aa-1.15□□□□□ -2.59
CCDC7-208ENST00000537047 CUX1P39880 1505 aa-1.15□□□□□ -2.59
CCDC7-208ENST00000537047 FAM135AQ9P2D6 1515 aa-1.15□□□□□ -2.59
CCDC7-208ENST00000537047 SAMD9Q5K651 1589 aa-1.16□□□□□ -2.59
CCDC7-208ENST00000537047 C20orf202A1L168 122 aa-1.16□□□□□ -2.6
CCDC7-208ENST00000537047 HMGN3Q15651 99 aa-1.16□□□□□ -2.6
CCDC7-208ENST00000537047 CLPSL2Q6UWE3 100 aa-1.16□□□□□ -2.6
CCDC7-208ENST00000537047 ALKAL2Q6UX46 152 aa-1.16□□□□□ -2.6
CCDC7-208ENST00000537047 PRDM15P57071 1507 aaPredicted RBP-1.16□□□□□ -2.6
CCDC7-208ENST00000537047 C5P01031 1676 aa-1.16□□□□□ -2.6
CCDC7-208ENST00000537047 RAPGEF2Q9Y4G8 1499 aa-1.17□□□□□ -2.6
CCDC7-208ENST00000537047 LINC00587B1AMM8 73 aa-1.17□□□□□ -2.6
CCDC7-208ENST00000537047 BCORQ6W2J9 1755 aa-1.17□□□□□ -2.6
CCDC7-208ENST00000537047 TIAM2Q8IVF5 1701 aa-1.18□□□□□ -2.6
CCDC7-208ENST00000537047 TTTY10Q9BZA0 68 aa-1.18□□□□□ -2.6
CCDC7-208ENST00000537047 KIF20BQ96Q89 1820 aa-1.18□□□□□ -2.6
CCDC7-208ENST00000537047 ATP10BO94823 1461 aa-1.18□□□□□ -2.6
CCDC7-208ENST00000537047 ATOX1O00244 68 aa-1.19□□□□□ -2.6
CCDC7-208ENST00000537047 SERP2Q8N6R1 65 aa-1.19□□□□□ -2.6
CCDC7-208ENST00000537047 DEFB104AQ8WTQ1 72 aa-1.19□□□□□ -2.6
CCDC7-208ENST00000537047 PMCHL2Q9BQD1 86 aa-1.19□□□□□ -2.6
CCDC7-208ENST00000537047 RGPD2P0DJD1 1756 aa-1.19□□□□□ -2.6
CCDC7-208ENST00000537047 RGPD8O14715 1765 aaPredicted RBP-1.2□□□□□ -2.6
CCDC7-208ENST00000537047 RGPD5Q99666 1765 aa-1.2□□□□□ -2.6
CCDC7-208ENST00000537047 TMEM218A2RU14 115 aa-1.2□□□□□ -2.6
CCDC7-208ENST00000537047 D6R8Y8 96 aa-1.2□□□□□ -2.6
CCDC7-208ENST00000537047 MUSTN1Q8IVN3 82 aa-1.2□□□□□ -2.6
CCDC7-208ENST00000537047 ZFYVE16Q7Z3T8 1539 aa-1.2□□□□□ -2.6
CCDC7-208ENST00000537047 IGLC2P0DOY2 106 aa-1.21□□□□□ -2.6
CCDC7-208ENST00000537047 IGLC3P0DOY3 106 aa-1.21□□□□□ -2.6
CCDC7-208ENST00000537047 SARNPP82979 210 aaKnown RBP-1.21□□□□□ -2.6
CCDC7-208ENST00000537047 DEFB136Q30KP8 78 aa-1.21□□□□□ -2.6
CCDC7-208ENST00000537047 NRXN1Q9ULB1 1477 aa-1.22□□□□□ -2.6
CCDC7-208ENST00000537047 LEPROTL1O95214 131 aa-1.22□□□□□ -2.6
CCDC7-208ENST00000537047 ETDBQ3ZM63 59 aa-1.22□□□□□ -2.6
CCDC7-208ENST00000537047 ZNF720Q7Z2F6 126 aa-1.22□□□□□ -2.6
CCDC7-208ENST00000537047 ANKRD36BQ8N2N9 1353 aa-1.22□□□□□ -2.61
CCDC7-208ENST00000537047 RPL38P63173 70 aaKnown RBP-1.23□□□□□ -2.61
CCDC7-208ENST00000537047 MAGI2Q86UL8 1455 aa-1.24□□□□□ -2.61
CCDC7-208ENST00000537047 UBR3Q6ZT12 1888 aa-1.24□□□□□ -2.61
CCDC7-208ENST00000537047 MT-ATP8P03928 68 aa-1.24□□□□□ -2.61
CCDC7-208ENST00000537047 LINC00032P0C843 101 aa-1.25□□□□□ -2.61
CCDC7-208ENST00000537047 PRLHP81277 87 aa-1.25□□□□□ -2.61
CCDC7-208ENST00000537047 QSER1Q2KHR3 1735 aa-1.26□□□□□ -2.61
CCDC7-208ENST00000537047 CDC42BPAQ5VT25 1732 aa-1.26□□□□□ -2.61
CCDC7-208ENST00000537047 CRYBG1Q9Y4K1 1723 aa-1.26□□□□□ -2.61
CCDC7-208ENST00000537047 UQCRHLA0A096LP55 91 aa-1.26□□□□□ -2.61
CCDC7-208ENST00000537047 F8WEM9 126 aa-1.26□□□□□ -2.61
CCDC7-208ENST00000537047 C3orf79P0CE67 100 aa-1.26□□□□□ -2.61
CCDC7-208ENST00000537047 COX7BP24311 80 aa-1.26□□□□□ -2.61
CCDC7-208ENST00000537047 COL5A1-AS1Q5SY13 56 aa-1.26□□□□□ -2.61
CCDC7-208ENST00000537047 ALKQ9UM73 1620 aa-1.26□□□□□ -2.61
CCDC7-208ENST00000537047 PREX1Q8TCU6 1659 aa-1.26□□□□□ -2.61
CCDC7-208ENST00000537047 LINC01546A6NGU7 62 aa-1.27□□□□□ -2.61
CCDC7-208ENST00000537047 UBE2D4Q9Y2X8 147 aa-1.27□□□□□ -2.61
CCDC7-208ENST00000537047 PKD1L3Q7Z443 1732 aa-1.28□□□□□ -2.61
CCDC7-208ENST00000537047 PLXNC1O60486 1568 aa-1.28□□□□□ -2.61
CCDC7-208ENST00000537047 MAP3K1Q13233 1512 aa-1.28□□□□□ -2.61
CCDC7-208ENST00000537047 A8MTW9 85 aa-1.28□□□□□ -2.61
CCDC7-208ENST00000537047 S100A10P60903 97 aa-1.28□□□□□ -2.61
CCDC7-208ENST00000537047 NDUFA3O95167 84 aa-1.29□□□□□ -2.62
CCDC7-208ENST00000537047 S100PP25815 95 aa-1.29□□□□□ -2.62
CCDC7-208ENST00000537047 LRRC9Q6ZRR7 1453 aa-1.3□□□□□ -2.62
CCDC7-208ENST00000537047 TEX14Q8IWB6 1497 aa-1.3□□□□□ -2.62
CCDC7-208ENST00000537047 FAUP35544 74 aaKnown RBP-1.3□□□□□ -2.62
CCDC7-208ENST00000537047 DPY30Q9C005 99 aa-1.3□□□□□ -2.62
CCDC7-208ENST00000537047 CLTCQ00610 1675 aaKnown RBP-1.31□□□□□ -2.62
CCDC7-208ENST00000537047 EPRSP07814 1512 aaKnown RBP-1.31□□□□□ -2.62
CCDC7-208ENST00000537047 C4AP0C0L4 1744 aa-1.32□□□□□ -2.62
CCDC7-208ENST00000537047 C4BP0C0L5 1744 aa-1.32□□□□□ -2.62
CCDC7-208ENST00000537047 TNP1P09430 55 aa-1.32□□□□□ -2.62
CCDC7-208ENST00000537047 TCEAL7Q9BRU2 100 aa-1.32□□□□□ -2.62
CCDC7-208ENST00000537047 C14orf144Q96I85 54 aa-1.33□□□□□ -2.62
CCDC7-208ENST00000537047 ABCC10Q5T3U5 1492 aa-1.33□□□□□ -2.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms