RNA–Protein interactions for RNA: ENST00000535835.5

SPARCL1-208, Transcript of SPARC like 1, humanhuman

TSL 4

Gene SPARCL1, Length 561 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-208ENST00000535835 WNK1Q9H4A3 2382 aa1.51□□□□□ -2.17
SPARCL1-208ENST00000535835 NOP10Q9NPE3 64 aaKnown RBP1.51□□□□□ -2.17
SPARCL1-208ENST00000535835 ABCA1O95477 2261 aa1.51□□□□□ -2.17
SPARCL1-208ENST00000535835 Q5VSD8 79 aa1.5□□□□□ -2.17
SPARCL1-208ENST00000535835 DEFB108BQ8NET1 73 aa1.5□□□□□ -2.17
SPARCL1-208ENST00000535835 SRCAPQ6ZRS2 3230 aa1.5□□□□□ -2.17
SPARCL1-208ENST00000535835 LELP1Q5T871 98 aa1.49□□□□□ -2.17
SPARCL1-208ENST00000535835 DEFB1P60022 68 aa1.48□□□□□ -2.17
SPARCL1-208ENST00000535835 PRLHP81277 87 aa1.48□□□□□ -2.17
SPARCL1-208ENST00000535835 S4R3F8 94 aa1.48□□□□□ -2.17
SPARCL1-208ENST00000535835 FN1P02751 2386 aaKnown RBP1.48□□□□□ -2.17
SPARCL1-208ENST00000535835 FAM208BQ5VWN6 2430 aa1.47□□□□□ -2.17
SPARCL1-208ENST00000535835 A0A0C4DFX4 3053 aa1.46□□□□□ -2.18
SPARCL1-208ENST00000535835 CD52P31358 61 aa1.46□□□□□ -2.18
SPARCL1-208ENST00000535835 PRO0255Q9UI72 69 aa1.46□□□□□ -2.18
SPARCL1-208ENST00000535835 PIEZO2Q9H5I5 2752 aa1.46□□□□□ -2.18
SPARCL1-208ENST00000535835 PCNX1Q96RV3 2341 aa1.45□□□□□ -2.18
SPARCL1-208ENST00000535835 HTN1P15515 57 aa1.45□□□□□ -2.18
SPARCL1-208ENST00000535835 CRCT1Q9UGL9 99 aa1.45□□□□□ -2.18
SPARCL1-208ENST00000535835 APLNQ9ULZ1 77 aa1.45□□□□□ -2.18
SPARCL1-208ENST00000535835 IGF2RP11717 2491 aa1.45□□□□□ -2.18
SPARCL1-208ENST00000535835 COL6A6A6NMZ7 2263 aa1.43□□□□□ -2.18
SPARCL1-208ENST00000535835 OTOGLQ3ZCN5 2332 aa1.43□□□□□ -2.18
SPARCL1-208ENST00000535835 KRTAP13-4Q3LI77 160 aa1.43□□□□□ -2.18
SPARCL1-208ENST00000535835 SPTBN1Q01082 2364 aaKnown RBP1.43□□□□□ -2.18
SPARCL1-208ENST00000535835 M0QZ58 72 aa1.42□□□□□ -2.18
SPARCL1-208ENST00000535835 KRTAP4-1Q9BYQ7 146 aa1.42□□□□□ -2.18
SPARCL1-208ENST00000535835 CACNA1HO95180 2353 aa1.42□□□□□ -2.18
SPARCL1-208ENST00000535835 SPINK1P00995 79 aa1.41□□□□□ -2.18
SPARCL1-208ENST00000535835 JMJD1CQ15652 2540 aa1.41□□□□□ -2.18
SPARCL1-208ENST00000535835 SPTA1P02549 2419 aa1.4□□□□□ -2.18
SPARCL1-208ENST00000535835 ZDBF2Q9HCK1 2354 aa1.4□□□□□ -2.19
SPARCL1-208ENST00000535835 H3BNG1 76 aa1.4□□□□□ -2.19
SPARCL1-208ENST00000535835 KRTAP12-1P59990 96 aa1.4□□□□□ -2.19
SPARCL1-208ENST00000535835 GPR179Q6PRD1 2367 aa1.39□□□□□ -2.19
SPARCL1-208ENST00000535835 PKDREJQ9NTG1 2253 aa1.38□□□□□ -2.19
SPARCL1-208ENST00000535835 SPTBN2O15020 2390 aa1.38□□□□□ -2.19
SPARCL1-208ENST00000535835 ZNF462Q96JM2 2506 aa1.38□□□□□ -2.19
SPARCL1-208ENST00000535835 PTPRZ1P23471 2315 aaPredicted RBP1.37□□□□□ -2.19
SPARCL1-208ENST00000535835 KRTAP13-1Q8IUC0 172 aa1.37□□□□□ -2.19
SPARCL1-208ENST00000535835 DEFB124Q8NES8 71 aa1.37□□□□□ -2.19
SPARCL1-208ENST00000535835 FBN1P35555 2871 aaKnown RBP1.37□□□□□ -2.19
SPARCL1-208ENST00000535835 AKAP6Q13023 2319 aa1.37□□□□□ -2.19
SPARCL1-208ENST00000535835 ACACAQ13085 2346 aa1.37□□□□□ -2.19
SPARCL1-208ENST00000535835 CACNA1GO43497 2377 aa1.36□□□□□ -2.19
SPARCL1-208ENST00000535835 ROS1P08922 2347 aa1.36□□□□□ -2.19
SPARCL1-208ENST00000535835 DEFB103AP81534 67 aa1.36□□□□□ -2.19
SPARCL1-208ENST00000535835 CEP250Q9BV73 2442 aa1.36□□□□□ -2.19
SPARCL1-208ENST00000535835 DSPP15924 2871 aaKnown RBP1.35□□□□□ -2.19
SPARCL1-208ENST00000535835 GVINP1Q7Z2Y8 2422 aa1.35□□□□□ -2.19
SPARCL1-208ENST00000535835 A0A0D9SG42 100 aa1.34□□□□□ -2.19
SPARCL1-208ENST00000535835 DEFB136Q30KP8 78 aa1.34□□□□□ -2.19
SPARCL1-208ENST00000535835 LINC01556Q5JQF7 62 aa1.34□□□□□ -2.19
SPARCL1-208ENST00000535835 FCGBPQ9Y6R7 5405 aaPredicted RBP1.33□□□□□ -2.2
SPARCL1-208ENST00000535835 CEP350Q5VT06 3117 aa1.32□□□□□ -2.2
SPARCL1-208ENST00000535835 DEFB133Q30KQ1 61 aa1.32□□□□□ -2.2
SPARCL1-208ENST00000535835 KRTAP12-4P60329 112 aa1.31□□□□□ -2.2
SPARCL1-208ENST00000535835 CELSR2Q9HCU4 2923 aa1.31□□□□□ -2.2
SPARCL1-208ENST00000535835 REV3LO60673 3130 aa1.31□□□□□ -2.2
SPARCL1-208ENST00000535835 C2CD3Q4AC94 2353 aa1.3□□□□□ -2.2
SPARCL1-208ENST00000535835 CHD7Q9P2D1 2997 aa1.3□□□□□ -2.2
SPARCL1-208ENST00000535835 A0A096LPF7 62 aa1.3□□□□□ -2.2
SPARCL1-208ENST00000535835 APC2O95996 2303 aa1.3□□□□□ -2.2
SPARCL1-208ENST00000535835 CSPG4Q6UVK1 2322 aa1.3□□□□□ -2.2
SPARCL1-208ENST00000535835 ABCA2Q9BZC7 2435 aa1.3□□□□□ -2.2
SPARCL1-208ENST00000535835 MGAQ8IWI9 3026 aa1.3□□□□□ -2.2
SPARCL1-208ENST00000535835 NCOR1O75376 2440 aa1.29□□□□□ -2.2
SPARCL1-208ENST00000535835 CREBBPQ92793 2442 aa1.29□□□□□ -2.2
SPARCL1-208ENST00000535835 UTRNP46939 3433 aa1.29□□□□□ -2.2
SPARCL1-208ENST00000535835 UBR5O95071 2799 aaPredicted RBP1.28□□□□□ -2.2
SPARCL1-208ENST00000535835 OTOGQ6ZRI0 2925 aa1.28□□□□□ -2.2
SPARCL1-208ENST00000535835 A0A096LNI7 61 aa1.28□□□□□ -2.2
SPARCL1-208ENST00000535835 SPART-AS1P0CW21 52 aa1.28□□□□□ -2.2
SPARCL1-208ENST00000535835 MUC6Q6W4X9 2439 aa1.28□□□□□ -2.2
SPARCL1-208ENST00000535835 MAP1BP46821 2468 aaKnown RBP1.28□□□□□ -2.2
SPARCL1-208ENST00000535835 SPTBN4Q9H254 2564 aa1.27□□□□□ -2.21
SPARCL1-208ENST00000535835 SPINK6Q6UWN8 80 aa1.27□□□□□ -2.21
SPARCL1-208ENST00000535835 TENM2Q9NT68 2774 aa1.27□□□□□ -2.21
SPARCL1-208ENST00000535835 VPS13DQ5THJ4 4388 aa1.27□□□□□ -2.21
SPARCL1-208ENST00000535835 PKD1L2Q7Z442 2459 aa1.27□□□□□ -2.21
SPARCL1-208ENST00000535835 WDR87Q6ZQQ6 2873 aa1.26□□□□□ -2.21
SPARCL1-208ENST00000535835 RPS29P62273 56 aaKnown RBP1.26□□□□□ -2.21
SPARCL1-208ENST00000535835 U3KQA8 63 aa1.26□□□□□ -2.21
SPARCL1-208ENST00000535835 BAHCC1Q9P281 2608 aa1.26□□□□□ -2.21
SPARCL1-208ENST00000535835 TRANK1O15050 2925 aa1.26□□□□□ -2.21
SPARCL1-208ENST00000535835 RIF1Q5UIP0 2472 aaKnown RBP1.25□□□□□ -2.21
SPARCL1-208ENST00000535835 KRTAP12-3P60328 96 aa1.25□□□□□ -2.21
SPARCL1-208ENST00000535835 EP400Q96L91 3159 aa1.25□□□□□ -2.21
SPARCL1-208ENST00000535835 ASH1LQ9NR48 2969 aaKnown RBP1.25□□□□□ -2.21
SPARCL1-208ENST00000535835 F8P00451 2351 aa1.25□□□□□ -2.21
SPARCL1-208ENST00000535835 ANKHD1Q8IWZ3 2542 aaKnown RBP1.24□□□□□ -2.21
SPARCL1-208ENST00000535835 EP300Q09472 2414 aaPredicted RBP1.24□□□□□ -2.21
SPARCL1-208ENST00000535835 HECTD1Q9ULT8 2610 aa1.23□□□□□ -2.21
SPARCL1-208ENST00000535835 NAV2Q8IVL1 2488 aa1.23□□□□□ -2.21
SPARCL1-208ENST00000535835 CHD6Q8TD26 2715 aa1.23□□□□□ -2.21
SPARCL1-208ENST00000535835 C9orf92A6NGG3 77 aa1.23□□□□□ -2.21
SPARCL1-208ENST00000535835 TNP1P09430 55 aa1.23□□□□□ -2.21
SPARCL1-208ENST00000535835 GOLGB1Q14789 3259 aaKnown RBP1.23□□□□□ -2.21
SPARCL1-208ENST00000535835 FAM186AA6NE01 2351 aa1.22□□□□□ -2.21
SPARCL1-208ENST00000535835 FBN3Q75N90 2809 aa1.22□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms