RNA–Protein interactions for RNA: ENST00000533961.1

RDX-215, Transcript of radixin, human

TSL 2

Gene RDX, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RDX-215	ENST00000533961	CROCC2	H7BZ55	1655 aa		0.21	□□□□□ -2.38
RDX-215	ENST00000533961	PKDREJ	Q9NTG1	2253 aa		0.21	□□□□□ -2.38
RDX-215	ENST00000533961	NAV2	Q8IVL1	2488 aa		0.21	□□□□□ -2.38
RDX-215	ENST00000533961	ETDC	A0A1B0GVM5	59 aa		0.21	□□□□□ -2.38
RDX-215	ENST00000533961	LINC01549	A6NIU2	74 aa		0.21	□□□□□ -2.38
RDX-215	ENST00000533961	SFTA3	P0C7M3	94 aa		0.21	□□□□□ -2.38
RDX-215	ENST00000533961	KLK9	Q2XQG4	91 aa		0.21	□□□□□ -2.38
RDX-215	ENST00000533961	SPTBN1	Q01082	2364 aa	Known RBP	0.21	□□□□□ -2.38
RDX-215	ENST00000533961	SYCP2	Q9BX26	1530 aa		0.21	□□□□□ -2.38
RDX-215	ENST00000533961	PIEZO1	Q92508	2521 aa		0.21	□□□□□ -2.38
RDX-215	ENST00000533961	EEA1	Q15075	1411 aa		0.21	□□□□□ -2.38
RDX-215	ENST00000533961	SYNE1	Q8NF91	8797 aa	Known RBP	0.2	□□□□□ -2.38
RDX-215	ENST00000533961	WNK2	Q9Y3S1	2297 aa		0.2	□□□□□ -2.38
RDX-215	ENST00000533961		K7EMI3	77 aa		0.2	□□□□□ -2.38
RDX-215	ENST00000533961	LINC00158	P58513	81 aa		0.2	□□□□□ -2.38
RDX-215	ENST00000533961	SMIM5	Q71RC9	77 aa		0.2	□□□□□ -2.38
RDX-215	ENST00000533961	FXYD6	Q9H0Q3	95 aa		0.2	□□□□□ -2.38
RDX-215	ENST00000533961	GVINP1	Q7Z2Y8	2422 aa		0.2	□□□□□ -2.38
RDX-215	ENST00000533961	PRX	Q9BXM0	1461 aa		0.2	□□□□□ -2.38
RDX-215	ENST00000533961	ITSN2	Q9NZM3	1697 aa		0.2	□□□□□ -2.38
RDX-215	ENST00000533961	ADCY10	Q96PN6	1610 aa		0.2	□□□□□ -2.38
RDX-215	ENST00000533961	CLASP1	Q7Z460	1538 aa		0.19	□□□□□ -2.38
RDX-215	ENST00000533961	CRIP1	P50238	77 aa		0.19	□□□□□ -2.38
RDX-215	ENST00000533961	FAT2	Q9NYQ8	4349 aa		0.19	□□□□□ -2.38
RDX-215	ENST00000533961	TNXB	P22105	4242 aa		0.19	□□□□□ -2.38
RDX-215	ENST00000533961	AKAP6	Q13023	2319 aa		0.19	□□□□□ -2.38
RDX-215	ENST00000533961	PKD1L1	Q8TDX9	2849 aa		0.19	□□□□□ -2.38
RDX-215	ENST00000533961	MAST4	O15021	2626 aa		0.18	□□□□□ -2.38
RDX-215	ENST00000533961	SON	P18583	2426 aa	Known RBP	0.18	□□□□□ -2.38
RDX-215	ENST00000533961	LRP1	Q07954	4544 aa	Known RBP	0.18	□□□□□ -2.38
RDX-215	ENST00000533961	TRANK1	O15050	2925 aa		0.18	□□□□□ -2.38
RDX-215	ENST00000533961	MROH2A	A6NES4	1674 aa		0.18	□□□□□ -2.38
RDX-215	ENST00000533961	CHD6	Q8TD26	2715 aa		0.18	□□□□□ -2.38
RDX-215	ENST00000533961	PRKDC	P78527	4128 aa	Known RBP	0.18	□□□□□ -2.38
RDX-215	ENST00000533961	SERF2	P84101	59 aa		0.18	□□□□□ -2.38
RDX-215	ENST00000533961	CELSR1	Q9NYQ6	3014 aa		0.18	□□□□□ -2.38
RDX-215	ENST00000533961	FLNA	P21333	2647 aa	Known RBP	0.17	□□□□□ -2.38
RDX-215	ENST00000533961		M0R2T5	61 aa		0.17	□□□□□ -2.38
RDX-215	ENST00000533961	PRM1	P04553	51 aa		0.17	□□□□□ -2.38
RDX-215	ENST00000533961	SPRR2D	P22532	72 aa		0.17	□□□□□ -2.38
RDX-215	ENST00000533961	PTPN13	Q12923	2485 aa		0.17	□□□□□ -2.38
RDX-215	ENST00000533961	CDC42BPA	Q5VT25	1732 aa		0.17	□□□□□ -2.38
RDX-215	ENST00000533961	TOGARAM1	Q9Y4F4	1720 aa		0.17	□□□□□ -2.38
RDX-215	ENST00000533961	STAB2	Q8WWQ8	2551 aa		0.17	□□□□□ -2.38
RDX-215	ENST00000533961	CPS1	P31327	1500 aa		0.17	□□□□□ -2.38
RDX-215	ENST00000533961	HUWE1	Q7Z6Z7	4374 aa	Known RBP	0.17	□□□□□ -2.38
RDX-215	ENST00000533961	ANKRD36C	Q5JPF3	1778 aa		0.17	□□□□□ -2.38
RDX-215	ENST00000533961	ABCA5	Q8WWZ7	1642 aa		0.16	□□□□□ -2.38
RDX-215	ENST00000533961	ABCA13	Q86UQ4	5058 aa		0.16	□□□□□ -2.38
RDX-215	ENST00000533961	ABCA2	Q9BZC7	2435 aa		0.16	□□□□□ -2.38
RDX-215	ENST00000533961	UGGT1	Q9NYU2	1555 aa		0.16	□□□□□ -2.38
RDX-215	ENST00000533961	IGIP	A6NJ69	53 aa		0.16	□□□□□ -2.38
RDX-215	ENST00000533961	IAPP	P10997	89 aa		0.16	□□□□□ -2.38
RDX-215	ENST00000533961	NMES1	Q9C002	83 aa		0.16	□□□□□ -2.38
RDX-215	ENST00000533961	CSPG4	Q6UVK1	2322 aa		0.16	□□□□□ -2.38
RDX-215	ENST00000533961	ALMS1	Q8TCU4	4167 aa		0.16	□□□□□ -2.38
RDX-215	ENST00000533961	HIVEP3	Q5T1R4	2406 aa		0.16	□□□□□ -2.38
RDX-215	ENST00000533961	NRXN3	Q9Y4C0	1643 aa		0.16	□□□□□ -2.38
RDX-215	ENST00000533961	FANCD2	Q9BXW9	1451 aa		0.16	□□□□□ -2.38
RDX-215	ENST00000533961	ATR	Q13535	2644 aa		0.16	□□□□□ -2.38
RDX-215	ENST00000533961	HRNR	Q86YZ3	2850 aa	Predicted RBP	0.16	□□□□□ -2.38
RDX-215	ENST00000533961	PRRC2C	Q9Y520	2896 aa	Known RBP	0.16	□□□□□ -2.38
RDX-215	ENST00000533961	KMT2A	Q03164	3969 aa		0.15	□□□□□ -2.38
RDX-215	ENST00000533961	ZFYVE26	Q68DK2	2539 aa		0.15	□□□□□ -2.39
RDX-215	ENST00000533961	DEFB130B	P0DP73	79 aa		0.15	□□□□□ -2.39
RDX-215	ENST00000533961	DEFB130A	P0DP74	79 aa		0.15	□□□□□ -2.39
RDX-215	ENST00000533961	DEFB135	Q30KP9	77 aa		0.15	□□□□□ -2.39
RDX-215	ENST00000533961	NCBP2-AS2	Q69YL0	99 aa		0.15	□□□□□ -2.39
RDX-215	ENST00000533961	NSD1	Q96L73	2696 aa	Predicted RBP	0.15	□□□□□ -2.39
RDX-215	ENST00000533961	IGF2R	P11717	2491 aa		0.14	□□□□□ -2.39
RDX-215	ENST00000533961	KNL1	Q8NG31	2342 aa		0.14	□□□□□ -2.39
RDX-215	ENST00000533961	SPTA1	P02549	2419 aa		0.14	□□□□□ -2.39
RDX-215	ENST00000533961	CREBBP	Q92793	2442 aa		0.14	□□□□□ -2.39
RDX-215	ENST00000533961	LOC730098	B7Z3J9	87 aa		0.14	□□□□□ -2.39
RDX-215	ENST00000533961		M0R1W7	72 aa		0.14	□□□□□ -2.39
RDX-215	ENST00000533961	SPRR2B	P35325	72 aa		0.14	□□□□□ -2.39
RDX-215	ENST00000533961	ABCC8	Q09428	1581 aa		0.14	□□□□□ -2.39
RDX-215	ENST00000533961	DSP	P15924	2871 aa	Known RBP	0.14	□□□□□ -2.39
RDX-215	ENST00000533961		A0A0C4DFX4	3053 aa		0.14	□□□□□ -2.39
RDX-215	ENST00000533961	EP300	Q09472	2414 aa	Predicted RBP	0.14	□□□□□ -2.39
RDX-215	ENST00000533961	MYCBP2	O75592	4640 aa		0.14	□□□□□ -2.39
RDX-215	ENST00000533961	HYDIN	Q4G0P3	5121 aa		0.13	□□□□□ -2.39
RDX-215	ENST00000533961	AGL	P35573	1532 aa		0.13	□□□□□ -2.39
RDX-215	ENST00000533961	LPA	P08519	4548 aa		0.13	□□□□□ -2.39
RDX-215	ENST00000533961	HIVEP1	P15822	2718 aa		0.13	□□□□□ -2.39
RDX-215	ENST00000533961	HMCN2	Q8NDA2	5059 aa		0.13	□□□□□ -2.39
RDX-215	ENST00000533961	RPS27	P42677	84 aa	Known RBP	0.13	□□□□□ -2.39
RDX-215	ENST00000533961	WT1-AS	Q06250	92 aa		0.13	□□□□□ -2.39
RDX-215	ENST00000533961	MINOS1	Q5TGZ0	78 aa		0.13	□□□□□ -2.39
RDX-215	ENST00000533961	RPS27L	Q71UM5	84 aa	Known RBP	0.13	□□□□□ -2.39
RDX-215	ENST00000533961	RIF1	Q5UIP0	2472 aa	Known RBP	0.13	□□□□□ -2.39
RDX-215	ENST00000533961	UBR5	O95071	2799 aa	Predicted RBP	0.13	□□□□□ -2.39
RDX-215	ENST00000533961	HERC1	Q15751	4861 aa		0.13	□□□□□ -2.39
RDX-215	ENST00000533961	AKAP13	Q12802	2813 aa		0.12	□□□□□ -2.39
RDX-215	ENST00000533961	LMO7	Q8WWI1	1683 aa		0.12	□□□□□ -2.39
RDX-215	ENST00000533961		H0YGG7	62 aa		0.12	□□□□□ -2.39
RDX-215	ENST00000533961	PRLH	P81277	87 aa		0.12	□□□□□ -2.39
RDX-215	ENST00000533961	TMEM167B	Q9NRX6	74 aa		0.12	□□□□□ -2.39
RDX-215	ENST00000533961	C6orf48	Q9UBA6	75 aa		0.12	□□□□□ -2.39
RDX-215	ENST00000533961	EPPK1	P58107	5090 aa	Known RBP	0.12	□□□□□ -2.39

Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms